RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 PCDHB15Q9Y5E8 787 aa17.07■□□□□ 0.32
TOP3B-213ENST00000457179 ANTXR1Q9H6X2 564 aa17.06■□□□□ 0.32
TOP3B-213ENST00000457179 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
TOP3B-213ENST00000457179 NSD2O96028 1365 aa17.05■□□□□ 0.32
TOP3B-213ENST00000457179 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
TOP3B-213ENST00000457179 MCM4P33991 863 aa17.05■□□□□ 0.32
TOP3B-213ENST00000457179 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
TOP3B-213ENST00000457179 ARID3AQ99856 593 aa17.05■□□□□ 0.32
TOP3B-213ENST00000457179 TRAK2O60296 914 aa17.05■□□□□ 0.32
TOP3B-213ENST00000457179 AMPHP49418 695 aa17.04■□□□□ 0.32
TOP3B-213ENST00000457179 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
TOP3B-213ENST00000457179 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
TOP3B-213ENST00000457179 TTC21BQ7Z4L5 1316 aa17.04■□□□□ 0.32
TOP3B-213ENST00000457179 MRE11P49959 708 aa17.03■□□□□ 0.32
TOP3B-213ENST00000457179 ITPRIPQ8IWB1 547 aa17.03■□□□□ 0.32
TOP3B-213ENST00000457179 MIS18AQ9NYP9 233 aa17.03■□□□□ 0.32
TOP3B-213ENST00000457179 RBM10P98175 930 aaKnown RBP17.03■□□□□ 0.32
TOP3B-213ENST00000457179 WDR63Q8IWG1 891 aa17.03■□□□□ 0.32
TOP3B-213ENST00000457179 UPF2Q9HAU5 1272 aaKnown RBP17.03■□□□□ 0.32
TOP3B-213ENST00000457179 ESCO1Q5FWF5 840 aa17.02■□□□□ 0.32
TOP3B-213ENST00000457179 NGEFQ8N5V2 710 aa17.02■□□□□ 0.32
TOP3B-213ENST00000457179 ABTB2Q8N961 1025 aa17.02■□□□□ 0.32
TOP3B-213ENST00000457179 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
TOP3B-213ENST00000457179 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
TOP3B-213ENST00000457179 GRPEL1Q9HAV7 217 aa17.02■□□□□ 0.32
TOP3B-213ENST00000457179 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.32
TOP3B-213ENST00000457179 ANKLE2Q86XL3 938 aa17.02■□□□□ 0.32
TOP3B-213ENST00000457179 FCHSD2O94868 740 aa17.01■□□□□ 0.31
TOP3B-213ENST00000457179 MCM10Q7L590 875 aa17.01■□□□□ 0.31
TOP3B-213ENST00000457179 PDCL3Q9H2J4 239 aa17.01■□□□□ 0.31
TOP3B-213ENST00000457179 KRT24Q2M2I5 525 aa17■□□□□ 0.31
TOP3B-213ENST00000457179 KIAA1211Q6ZU35 1233 aa17■□□□□ 0.31
TOP3B-213ENST00000457179 TSPYL6Q8N831 410 aa17■□□□□ 0.31
TOP3B-213ENST00000457179 PTPRUQ92729 1446 aa17■□□□□ 0.31
TOP3B-213ENST00000457179 FOXO3O43524 673 aa16.99■□□□□ 0.31
TOP3B-213ENST00000457179 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
TOP3B-213ENST00000457179 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
TOP3B-213ENST00000457179 IL13P35225 146 aa16.99■□□□□ 0.31
TOP3B-213ENST00000457179 TBX22Q9Y458 520 aa16.99■□□□□ 0.31
TOP3B-213ENST00000457179 TPM2P07951 284 aa16.98■□□□□ 0.31
TOP3B-213ENST00000457179 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
TOP3B-213ENST00000457179 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
TOP3B-213ENST00000457179 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
TOP3B-213ENST00000457179 ZKSCAN2Q63HK3 967 aa16.98■□□□□ 0.31
TOP3B-213ENST00000457179 PLEKHG1Q9ULL1 1385 aa16.97■□□□□ 0.31
TOP3B-213ENST00000457179 DZIP1LQ8IYY4 767 aaKnown RBP16.97■□□□□ 0.31
TOP3B-213ENST00000457179 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
TOP3B-213ENST00000457179 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
TOP3B-213ENST00000457179 CPS1P31327 1500 aa16.96■□□□□ 0.31
TOP3B-213ENST00000457179 PSME1Q06323 249 aa16.96■□□□□ 0.31
TOP3B-213ENST00000457179 HSPA2P54652 639 aa16.95■□□□□ 0.3
TOP3B-213ENST00000457179 NFE2L2Q16236 605 aa16.95■□□□□ 0.3
TOP3B-213ENST00000457179 EDC4Q6P2E9 1401 aaKnown RBP16.95■□□□□ 0.3
TOP3B-213ENST00000457179 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
TOP3B-213ENST00000457179 TRIM27P14373 513 aa16.95■□□□□ 0.3
TOP3B-213ENST00000457179 FAM13BQ9NYF5 915 aa16.95■□□□□ 0.3
TOP3B-213ENST00000457179 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
TOP3B-213ENST00000457179 NLRP1Q9C000 1473 aa16.95■□□□□ 0.3
TOP3B-213ENST00000457179 MVPQ14764 893 aaKnown RBP16.94■□□□□ 0.3
TOP3B-213ENST00000457179 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
TOP3B-213ENST00000457179 MAP3K19Q56UN5 1328 aa16.94■□□□□ 0.3
TOP3B-213ENST00000457179 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
TOP3B-213ENST00000457179 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
TOP3B-213ENST00000457179 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
TOP3B-213ENST00000457179 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
TOP3B-213ENST00000457179 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
TOP3B-213ENST00000457179 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
TOP3B-213ENST00000457179 MBIPQ9NS73 344 aa16.92■□□□□ 0.3
TOP3B-213ENST00000457179 CPSF1Q10570 1443 aaKnown RBP16.92■□□□□ 0.3
TOP3B-213ENST00000457179 PRDM4Q9UKN5 801 aa16.92■□□□□ 0.3
TOP3B-213ENST00000457179 CHMP5Q9NZZ3 219 aa16.91■□□□□ 0.3
TOP3B-213ENST00000457179 TMEM57Q8N5G2 664 aa16.91■□□□□ 0.3
TOP3B-213ENST00000457179 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
TOP3B-213ENST00000457179 ATP7BP35670 1465 aa16.9■□□□□ 0.3
TOP3B-213ENST00000457179 PLEKHG3A1L390 1219 aa16.9■□□□□ 0.3
TOP3B-213ENST00000457179 GAS2L3Q86XJ1 694 aa16.9■□□□□ 0.3
TOP3B-213ENST00000457179 FAM135BQ49AJ0 1406 aa16.9■□□□□ 0.3
TOP3B-213ENST00000457179 NRXN3Q9Y4C0 1643 aa16.9■□□□□ 0.3
TOP3B-213ENST00000457179 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
TOP3B-213ENST00000457179 PHF8Q9UPP1 1060 aa16.89■□□□□ 0.29
TOP3B-213ENST00000457179 TWISTNBQ3B726 338 aaPredicted RBP16.89■□□□□ 0.29
TOP3B-213ENST00000457179 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
TOP3B-213ENST00000457179 ATF7IPQ6VMQ6 1270 aa16.88■□□□□ 0.29
TOP3B-213ENST00000457179 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
TOP3B-213ENST00000457179 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
TOP3B-213ENST00000457179 APBB1O00213 710 aa16.88■□□□□ 0.29
TOP3B-213ENST00000457179 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
TOP3B-213ENST00000457179 DDX11L8A8MPP1 907 aa16.86■□□□□ 0.29
TOP3B-213ENST00000457179 EYA1Q99502 592 aa16.86■□□□□ 0.29
TOP3B-213ENST00000457179 AAMPQ13685 434 aa16.86■□□□□ 0.29
TOP3B-213ENST00000457179 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
TOP3B-213ENST00000457179 UBR1Q8IWV7 1749 aa16.86■□□□□ 0.29
TOP3B-213ENST00000457179 GNAI1P63096 354 aa16.85■□□□□ 0.29
TOP3B-213ENST00000457179 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
TOP3B-213ENST00000457179 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
TOP3B-213ENST00000457179 USP6P35125 1406 aa16.85■□□□□ 0.29
TOP3B-213ENST00000457179 MTHFSDQ2M296 383 aaKnown RBP16.85■□□□□ 0.29
TOP3B-213ENST00000457179 ZHX1Q9UKY1 873 aaPredicted RBP16.85■□□□□ 0.29
TOP3B-213ENST00000457179 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
TOP3B-213ENST00000457179 DLC1Q96QB1 1528 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms