RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 ZNF516Q92618 1163 aa13.89□□□□□ -0.19
COPS7B-214ENST00000449784 ZNF142P52746 1687 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-214ENST00000449784 Q6ZNB5 142 aa13.88□□□□□ -0.19
COPS7B-214ENST00000449784 TTC13Q8NBP0 860 aa13.88□□□□□ -0.19
COPS7B-214ENST00000449784 IL21Q9HBE4 155 aa13.88□□□□□ -0.19
COPS7B-214ENST00000449784 CEP170BQ9Y4F5 1589 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-214ENST00000449784 A2ML1A8K2U0 1454 aa13.87□□□□□ -0.19
COPS7B-214ENST00000449784 E9PCH4 1651 aa13.86□□□□□ -0.19
COPS7B-214ENST00000449784 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
COPS7B-214ENST00000449784 TRIM52Q96A61 297 aa13.86□□□□□ -0.19
COPS7B-214ENST00000449784 SYNMO15061 1565 aa13.85□□□□□ -0.19
COPS7B-214ENST00000449784 HRCP23327 699 aa13.85□□□□□ -0.19
COPS7B-214ENST00000449784 HSPA2P54652 639 aa13.84□□□□□ -0.19
COPS7B-214ENST00000449784 COPS2P61201 443 aa13.84□□□□□ -0.19
COPS7B-214ENST00000449784 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
COPS7B-214ENST00000449784 PTPRTO14522 1441 aa13.83□□□□□ -0.2
COPS7B-214ENST00000449784 PPP1R18Q6NYC8 613 aa13.83□□□□□ -0.2
COPS7B-214ENST00000449784 SLF2Q8IX21 1173 aa13.82□□□□□ -0.2
COPS7B-214ENST00000449784 NKX2-3Q8TAU0 364 aa13.82□□□□□ -0.2
COPS7B-214ENST00000449784 SLC52A1Q9NWF4 448 aa13.82□□□□□ -0.2
COPS7B-214ENST00000449784 PLA2R1Q13018 1463 aa13.81□□□□□ -0.2
COPS7B-214ENST00000449784 UGGT1Q9NYU2 1555 aa13.81□□□□□ -0.2
COPS7B-214ENST00000449784 PRKD2Q9BZL6 878 aa13.81□□□□□ -0.2
COPS7B-214ENST00000449784 PIK3C2BO00750 1634 aa13.8□□□□□ -0.2
COPS7B-214ENST00000449784 IDI1Q13907 227 aa13.8□□□□□ -0.2
COPS7B-214ENST00000449784 EYA1Q99502 592 aa13.8□□□□□ -0.2
COPS7B-214ENST00000449784 MPHOSPH9Q99550 1183 aa13.8□□□□□ -0.2
COPS7B-214ENST00000449784 TRPM2O94759 1503 aa13.8□□□□□ -0.2
COPS7B-214ENST00000449784 NUTM2FA1L443 756 aa13.79□□□□□ -0.2
COPS7B-214ENST00000449784 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
COPS7B-214ENST00000449784 ADGRB3O60242 1522 aa13.78□□□□□ -0.2
COPS7B-214ENST00000449784 KDM5AP29375 1690 aaKnown RBP13.78□□□□□ -0.2
COPS7B-214ENST00000449784 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
COPS7B-214ENST00000449784 SLC4A3P48751 1232 aa13.77□□□□□ -0.21
COPS7B-214ENST00000449784 PTGDRQ13258 359 aa13.77□□□□□ -0.21
COPS7B-214ENST00000449784 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
COPS7B-214ENST00000449784 UBR1Q8IWV7 1749 aa13.77□□□□□ -0.21
COPS7B-214ENST00000449784 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
COPS7B-214ENST00000449784 GFRA3O60609 400 aa13.76□□□□□ -0.21
COPS7B-214ENST00000449784 SLIT1O75093 1534 aa13.75□□□□□ -0.21
COPS7B-214ENST00000449784 ARHGAP23Q9P227 1491 aa13.75□□□□□ -0.21
COPS7B-214ENST00000449784 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
COPS7B-214ENST00000449784 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
COPS7B-214ENST00000449784 STRCQ7RTU9 1775 aa13.73□□□□□ -0.21
COPS7B-214ENST00000449784 TMEM2Q9UHN6 1383 aa13.73□□□□□ -0.21
COPS7B-214ENST00000449784 TMEM131LA2VDJ0 1609 aa13.73□□□□□ -0.21
COPS7B-214ENST00000449784 CLTCL1P53675 1640 aa13.73□□□□□ -0.21
COPS7B-214ENST00000449784 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.21
COPS7B-214ENST00000449784 SEMA3EO15041 775 aa13.71□□□□□ -0.21
COPS7B-214ENST00000449784 PCDHB3Q9Y5E6 796 aa13.71□□□□□ -0.21
COPS7B-214ENST00000449784 MED14O60244 1454 aa13.71□□□□□ -0.21
COPS7B-214ENST00000449784 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
COPS7B-214ENST00000449784 DNAJB2P25686 324 aa13.7□□□□□ -0.22
COPS7B-214ENST00000449784 ANKLE2Q86XL3 938 aa13.7□□□□□ -0.22
COPS7B-214ENST00000449784 RBM46Q8TBY0 533 aaKnown RBP13.7□□□□□ -0.22
COPS7B-214ENST00000449784 ADGRG1Q9Y653 693 aa13.7□□□□□ -0.22
COPS7B-214ENST00000449784 CCDC144AA2RUR9 1427 aa13.7□□□□□ -0.22
COPS7B-214ENST00000449784 ZFYVE9O95405 1425 aa13.7□□□□□ -0.22
COPS7B-214ENST00000449784 ANKRD30BQ9BXX2 1392 aa13.69□□□□□ -0.22
COPS7B-214ENST00000449784 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-214ENST00000449784 LTKP29376 864 aa13.68□□□□□ -0.22
COPS7B-214ENST00000449784 BLOC1S3Q6QNY0 202 aa13.68□□□□□ -0.22
COPS7B-214ENST00000449784 NPHP4O75161 1426 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-214ENST00000449784 RIMS2Q9UQ26 1411 aa13.67□□□□□ -0.22
COPS7B-214ENST00000449784 ZPR1O75312 459 aa13.67□□□□□ -0.22
COPS7B-214ENST00000449784 LAPTM4AQ15012 233 aa13.67□□□□□ -0.22
COPS7B-214ENST00000449784 SPATA31E1Q6ZUB1 1445 aa13.66□□□□□ -0.22
COPS7B-214ENST00000449784 RCCD1A6NED2 376 aa13.66□□□□□ -0.22
COPS7B-214ENST00000449784 GGCXP38435 758 aa13.66□□□□□ -0.22
COPS7B-214ENST00000449784 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
COPS7B-214ENST00000449784 EID1Q9Y6B2 187 aa13.66□□□□□ -0.22
COPS7B-214ENST00000449784 PRR14Q9BWN1 585 aa13.65□□□□□ -0.22
COPS7B-214ENST00000449784 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
COPS7B-214ENST00000449784 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
COPS7B-214ENST00000449784 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
COPS7B-214ENST00000449784 TLL1O43897 1013 aa13.64□□□□□ -0.23
COPS7B-214ENST00000449784 PCGF6Q9BYE7 350 aa13.64□□□□□ -0.23
COPS7B-214ENST00000449784 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
COPS7B-214ENST00000449784 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
COPS7B-214ENST00000449784 PLEKHG1Q9ULL1 1385 aa13.63□□□□□ -0.23
COPS7B-214ENST00000449784 KIF1BO60333 1816 aa13.63□□□□□ -0.23
COPS7B-214ENST00000449784 FCHSD2O94868 740 aa13.63□□□□□ -0.23
COPS7B-214ENST00000449784 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
COPS7B-214ENST00000449784 NEXMIFQ5QGS0 1516 aa13.63□□□□□ -0.23
COPS7B-214ENST00000449784 LCE2BO14633 110 aa13.62□□□□□ -0.23
COPS7B-214ENST00000449784 CFHP08603 1231 aa13.61□□□□□ -0.23
COPS7B-214ENST00000449784 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
COPS7B-214ENST00000449784 RPGRIP1LQ68CZ1 1315 aa13.61□□□□□ -0.23
COPS7B-214ENST00000449784 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-214ENST00000449784 TRAF7Q6Q0C0 670 aa13.6□□□□□ -0.23
COPS7B-214ENST00000449784 NRG2O14511 850 aaPredicted RBP13.59□□□□□ -0.23
COPS7B-214ENST00000449784 KMT5BQ4FZB7 885 aa13.59□□□□□ -0.23
COPS7B-214ENST00000449784 NUTM2DQ5VT03 806 aaPredicted RBP13.58□□□□□ -0.24
COPS7B-214ENST00000449784 PDZRN3Q9UPQ7 1066 aa13.58□□□□□ -0.24
COPS7B-214ENST00000449784 SETBP1Q9Y6X0 1596 aa13.58□□□□□ -0.24
COPS7B-214ENST00000449784 ADAMTS13Q76LX8 1427 aa13.57□□□□□ -0.24
COPS7B-214ENST00000449784 RBM26Q5T8P6 1007 aaKnown RBP13.57□□□□□ -0.24
COPS7B-214ENST00000449784 LTBP4Q8N2S1 1624 aa13.57□□□□□ -0.24
COPS7B-214ENST00000449784 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
COPS7B-214ENST00000449784 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms