RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 BCL9O00512 1426 aa18.76■□□□□ 0.59
AC004540.1-204ENST00000449537 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
AC004540.1-204ENST00000449537 CDCA7Q9BWT1 371 aaPredicted RBP18.76■□□□□ 0.59
AC004540.1-204ENST00000449537 POLD1P28340 1107 aa18.75■□□□□ 0.59
AC004540.1-204ENST00000449537 PPARGC1BQ86YN6 1023 aaKnown RBP18.75■□□□□ 0.59
AC004540.1-204ENST00000449537 GPBP1L1Q9HC44 474 aaPredicted RBP18.75■□□□□ 0.59
AC004540.1-204ENST00000449537 ACEP12821 1306 aa18.74■□□□□ 0.59
AC004540.1-204ENST00000449537 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
AC004540.1-204ENST00000449537 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
AC004540.1-204ENST00000449537 USP19O94966 1318 aa18.74■□□□□ 0.59
AC004540.1-204ENST00000449537 SLC16A10Q8TF71 515 aa18.73■□□□□ 0.59
AC004540.1-204ENST00000449537 LRRC37A3O60309 1634 aa18.72■□□□□ 0.59
AC004540.1-204ENST00000449537 ATP10DQ9P241 1426 aa18.72■□□□□ 0.59
AC004540.1-204ENST00000449537 EXOC5O00471 708 aa18.71■□□□□ 0.59
AC004540.1-204ENST00000449537 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
AC004540.1-204ENST00000449537 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
AC004540.1-204ENST00000449537 NLGN2Q8NFZ4 835 aa18.7■□□□□ 0.58
AC004540.1-204ENST00000449537 CCDC61Q9Y6R9 512 aa18.7■□□□□ 0.58
AC004540.1-204ENST00000449537 PLEKHG3A1L390 1219 aa18.69■□□□□ 0.58
AC004540.1-204ENST00000449537 YBX3P16989 372 aaKnown RBP eCLIP18.69■□□□□ 0.58
AC004540.1-204ENST00000449537 CDK19Q9BWU1 502 aa18.69■□□□□ 0.58
AC004540.1-204ENST00000449537 ITSN1Q15811 1721 aa18.69■□□□□ 0.58
AC004540.1-204ENST00000449537 ZNF827Q17R98 1081 aa18.67■□□□□ 0.58
AC004540.1-204ENST00000449537 ZNF526Q8TF50 670 aaPredicted RBP18.66■□□□□ 0.58
AC004540.1-204ENST00000449537 ADGRB1O14514 1584 aa18.66■□□□□ 0.58
AC004540.1-204ENST00000449537 WDR17Q8IZU2 1322 aa18.66■□□□□ 0.58
AC004540.1-204ENST00000449537 GOLGB1Q14789 3259 aaKnown RBP18.66■□□□□ 0.58
AC004540.1-204ENST00000449537 AKAP12Q02952 1782 aa18.65■□□□□ 0.58
AC004540.1-204ENST00000449537 ACSBG1Q96GR2 724 aa18.64■□□□□ 0.57
AC004540.1-204ENST00000449537 CAPN15O75808 1086 aa18.63■□□□□ 0.57
AC004540.1-204ENST00000449537 CARD10Q9BWT7 1032 aa18.63■□□□□ 0.57
AC004540.1-204ENST00000449537 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
AC004540.1-204ENST00000449537 CSB-PGBD3P0DP91 1061 aa18.62■□□□□ 0.57
AC004540.1-204ENST00000449537 APLP1P51693 650 aa18.62■□□□□ 0.57
AC004540.1-204ENST00000449537 LRRC4BQ9NT99 713 aa18.62■□□□□ 0.57
AC004540.1-204ENST00000449537 NLRP6P59044 892 aa18.61■□□□□ 0.57
AC004540.1-204ENST00000449537 AKT1S1Q96B36 256 aa18.61■□□□□ 0.57
AC004540.1-204ENST00000449537 DNAJC5GQ8N7S2 189 aa18.6■□□□□ 0.57
AC004540.1-204ENST00000449537 TFCP2L1Q9NZI6 479 aa18.59■□□□□ 0.57
AC004540.1-204ENST00000449537 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
AC004540.1-204ENST00000449537 PAPPAQ13219 1627 aa18.59■□□□□ 0.57
AC004540.1-204ENST00000449537 TOPAZ1Q8N9V7 1692 aa18.58■□□□□ 0.57
AC004540.1-204ENST00000449537 USP6P35125 1406 aa18.57■□□□□ 0.56
AC004540.1-204ENST00000449537 BRD4O60885 1362 aaPredicted RBP18.57■□□□□ 0.56
AC004540.1-204ENST00000449537 PNPLA7Q6ZV29 1317 aa18.57■□□□□ 0.56
AC004540.1-204ENST00000449537 COL13A1Q5TAT6 717 aaPredicted RBP18.57■□□□□ 0.56
AC004540.1-204ENST00000449537 KAT6BQ8WYB5 2073 aa18.57■□□□□ 0.56
AC004540.1-204ENST00000449537 WNK3Q9BYP7 1800 aa18.56■□□□□ 0.56
AC004540.1-204ENST00000449537 SLC27A3Q5K4L6 730 aa18.56■□□□□ 0.56
AC004540.1-204ENST00000449537 KIF3CO14782 793 aa18.55■□□□□ 0.56
AC004540.1-204ENST00000449537 ADCY9O60503 1353 aa18.55■□□□□ 0.56
AC004540.1-204ENST00000449537 COL24A1Q17RW2 1714 aa18.54■□□□□ 0.56
AC004540.1-204ENST00000449537 NHSQ6T4R5 1651 aa18.54■□□□□ 0.56
AC004540.1-204ENST00000449537 PRELPP51888 382 aa18.54■□□□□ 0.56
AC004540.1-204ENST00000449537 COL18A1P39060 1754 aa18.53■□□□□ 0.56
AC004540.1-204ENST00000449537 ARHGEF25Q86VW2 580 aa18.53■□□□□ 0.56
AC004540.1-204ENST00000449537 DCAF11Q8TEB1 546 aa18.53■□□□□ 0.56
AC004540.1-204ENST00000449537 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
AC004540.1-204ENST00000449537 TNS4Q8IZW8 715 aa18.52■□□□□ 0.56
AC004540.1-204ENST00000449537 TNS2Q63HR2 1409 aa18.51■□□□□ 0.55
AC004540.1-204ENST00000449537 MSH5O43196 834 aa18.51■□□□□ 0.55
AC004540.1-204ENST00000449537 QSER1Q2KHR3 1735 aa18.5■□□□□ 0.55
AC004540.1-204ENST00000449537 SRPK2P78362 688 aaKnown RBP18.5■□□□□ 0.55
AC004540.1-204ENST00000449537 STAC3Q96MF2 364 aa18.5■□□□□ 0.55
AC004540.1-204ENST00000449537 CD2APQ9Y5K6 639 aa18.5■□□□□ 0.55
AC004540.1-204ENST00000449537 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
AC004540.1-204ENST00000449537 SLIT3O75094 1523 aa18.49■□□□□ 0.55
AC004540.1-204ENST00000449537 ARHGEF28Q8N1W1 1705 aaKnown RBP18.49■□□□□ 0.55
AC004540.1-204ENST00000449537 BTAF1O14981 1849 aa18.49■□□□□ 0.55
AC004540.1-204ENST00000449537 KCNH5Q8NCM2 988 aa18.49■□□□□ 0.55
AC004540.1-204ENST00000449537 TOMM70O94826 608 aa18.48■□□□□ 0.55
AC004540.1-204ENST00000449537 KCNQ4P56696 695 aa18.48■□□□□ 0.55
AC004540.1-204ENST00000449537 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
AC004540.1-204ENST00000449537 SOX12O15370 315 aa18.47■□□□□ 0.55
AC004540.1-204ENST00000449537 RGPD5Q99666 1765 aa18.46■□□□□ 0.55
AC004540.1-204ENST00000449537 IL2RBP14784 551 aa18.45■□□□□ 0.54
AC004540.1-204ENST00000449537 COL23A1Q86Y22 540 aaPredicted RBP18.45■□□□□ 0.54
AC004540.1-204ENST00000449537 CABP2Q9NPB3 220 aa18.45■□□□□ 0.54
AC004540.1-204ENST00000449537 CABP1Q9NZU7 370 aa18.45■□□□□ 0.54
AC004540.1-204ENST00000449537 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
AC004540.1-204ENST00000449537 NLRP2Q9NX02 1062 aa18.44■□□□□ 0.54
AC004540.1-204ENST00000449537 JMYQ8N9B5 988 aa18.43■□□□□ 0.54
AC004540.1-204ENST00000449537 KLRG1Q96E93 195 aa18.43■□□□□ 0.54
AC004540.1-204ENST00000449537 ABCC6O95255 1503 aa18.43■□□□□ 0.54
AC004540.1-204ENST00000449537 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
AC004540.1-204ENST00000449537 SYTL4Q96C24 671 aaPredicted RBP18.4■□□□□ 0.54
AC004540.1-204ENST00000449537 TUBGCP6Q96RT7 1819 aa18.39■□□□□ 0.54
AC004540.1-204ENST00000449537 DDX54Q8TDD1 881 aaKnown RBP18.39■□□□□ 0.53
AC004540.1-204ENST00000449537 SLC34A2O95436 690 aa18.38■□□□□ 0.53
AC004540.1-204ENST00000449537 PRIM1P49642 420 aaKnown RBP18.38■□□□□ 0.53
AC004540.1-204ENST00000449537 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
AC004540.1-204ENST00000449537 WWC3Q9ULE0 1092 aa18.38■□□□□ 0.53
AC004540.1-204ENST00000449537 IGSF1Q8N6C5 1336 aa18.37■□□□□ 0.53
AC004540.1-204ENST00000449537 HTRA3P83110 453 aa18.36■□□□□ 0.53
AC004540.1-204ENST00000449537 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
AC004540.1-204ENST00000449537 ZNF692Q9BU19 519 aaPredicted RBP18.36■□□□□ 0.53
AC004540.1-204ENST00000449537 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
AC004540.1-204ENST00000449537 ERBB3P21860 1342 aa18.34■□□□□ 0.53
AC004540.1-204ENST00000449537 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
AC004540.1-204ENST00000449537 RBM46Q8TBY0 533 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms