RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 TNNQ9UQP3 1299 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 KDM5BQ9UGL1 1544 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 TBC1D9Q6ZT07 1266 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 ZSCAN30Q86W11 494 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 CCDC61Q9Y6R9 512 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 FANCAO15360 1455 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 WDR33Q9C0J8 1336 aaKnown RBP9.65□□□□□ -0.86
VPS8-210ENST00000446204 ANKRD36BQ8N2N9 1353 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 SSFA2P28290 1259 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 IDI1Q13907 227 aa9.65□□□□□ -0.87
VPS8-210ENST00000446204 SASS6Q6UVJ0 657 aa9.64□□□□□ -0.87
VPS8-210ENST00000446204 CCDC9Q9Y3X0 531 aaKnown RBP9.64□□□□□ -0.87
VPS8-210ENST00000446204 PSMA5P28066 241 aa9.64□□□□□ -0.87
VPS8-210ENST00000446204 DCTN1Q14203 1278 aa9.64□□□□□ -0.87
VPS8-210ENST00000446204 HDGFL1Q5TGJ6 251 aa9.64□□□□□ -0.87
VPS8-210ENST00000446204 WAPLQ7Z5K2 1190 aa9.64□□□□□ -0.87
VPS8-210ENST00000446204 NUDT16Q96DE0 195 aaKnown RBP9.64□□□□□ -0.87
VPS8-210ENST00000446204 CCDC34Q96HJ3 373 aa9.64□□□□□ -0.87
VPS8-210ENST00000446204 TRAPPC8Q9Y2L5 1435 aa9.64□□□□□ -0.87
VPS8-210ENST00000446204 RRP9O43818 475 aaKnown RBP9.63□□□□□ -0.87
VPS8-210ENST00000446204 TPM3P06753 285 aa9.63□□□□□ -0.87
VPS8-210ENST00000446204 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
VPS8-210ENST00000446204 FIBPO43427 364 aa9.63□□□□□ -0.87
VPS8-210ENST00000446204 XRCC6P12956 609 aaKnown RBP eCLIP9.63□□□□□ -0.87
VPS8-210ENST00000446204 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
VPS8-210ENST00000446204 ARHGAP45Q92619 1136 aa9.63□□□□□ -0.87
VPS8-210ENST00000446204 SMARCA5O60264 1052 aaPredicted RBP9.63□□□□□ -0.87
VPS8-210ENST00000446204 KDM5CP41229 1560 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 PDCP20941 246 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 SNX21Q969T3 373 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 PUS7Q96PZ0 661 aaKnown RBP9.62□□□□□ -0.87
VPS8-210ENST00000446204 EXOC6BQ9Y2D4 811 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 CD109Q6YHK3 1445 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 PBRM1Q86U86 1689 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 HMGN5P82970 282 aaKnown RBP9.62□□□□□ -0.87
VPS8-210ENST00000446204 PSME1Q06323 249 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 MCM10Q7L590 875 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 NME9Q86XW9 330 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 ZNF592Q92610 1267 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 FYB1O15117 783 aa9.62□□□□□ -0.87
VPS8-210ENST00000446204 LRRFIP1Q32MZ4 808 aaKnown RBP9.62□□□□□ -0.87
VPS8-210ENST00000446204 TTC5Q8N0Z6 440 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 BAG4O95429 457 aaKnown RBP9.61□□□□□ -0.87
VPS8-210ENST00000446204 RBM10P98175 930 aaKnown RBP9.61□□□□□ -0.87
VPS8-210ENST00000446204 SMC5Q8IY18 1101 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 MBIPQ9NS73 344 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 SYCE3A1L190 88 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 HIP1O00291 1037 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 FSD1Q9BTV5 496 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 ADGBQ8N7X0 1667 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 ERC1Q8IUD2 1116 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 DMRT2Q9Y5R5 561 aa9.61□□□□□ -0.87
VPS8-210ENST00000446204 KLHL40Q2TBA0 621 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 CCDC73Q6ZRK6 1079 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 RIC3Q7Z5B4 369 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 CYP46A1Q9Y6A2 500 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 TRHP20396 242 aaPredicted RBP9.6□□□□□ -0.87
VPS8-210ENST00000446204 MX1P20591 662 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 AIMP1Q12904 312 aaKnown RBP9.6□□□□□ -0.87
VPS8-210ENST00000446204 AEBP1Q8IUX7 1158 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 ABTB2Q8N961 1025 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 IL1RAPL2Q9NP60 686 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 ZBTB40Q9NUA8 1239 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 TTC22Q5TAA0 569 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 MIS18AQ9NYP9 233 aa9.6□□□□□ -0.87
VPS8-210ENST00000446204 SRGAP3O43295 1099 aa9.59□□□□□ -0.87
VPS8-210ENST00000446204 MAP4K4O95819 1239 aaPredicted RBP9.59□□□□□ -0.87
VPS8-210ENST00000446204 CLCN1P35523 988 aa9.59□□□□□ -0.87
VPS8-210ENST00000446204 PANK2Q9BZ23 570 aa9.59□□□□□ -0.87
VPS8-210ENST00000446204 PTPRCP08575 1304 aa9.59□□□□□ -0.87
VPS8-210ENST00000446204 CPLX2Q6PUV4 134 aaKnown RBP9.59□□□□□ -0.87
VPS8-210ENST00000446204 WASLO00401 505 aaPredicted RBP9.58□□□□□ -0.88
VPS8-210ENST00000446204 CPLX1O14810 134 aa9.58□□□□□ -0.88
VPS8-210ENST00000446204 CCDC192P0DO97 292 aa9.58□□□□□ -0.88
VPS8-210ENST00000446204 TRIM5Q9C035 493 aa9.58□□□□□ -0.88
VPS8-210ENST00000446204 UPF3BQ9BZI7 483 aaKnown RBP9.58□□□□□ -0.88
VPS8-210ENST00000446204 EIF4G3O43432 1585 aaKnown RBP9.58□□□□□ -0.88
VPS8-210ENST00000446204 UQCRHLA0A096LP55 91 aa9.58□□□□□ -0.88
VPS8-210ENST00000446204 UQCRHP07919 91 aa9.58□□□□□ -0.88
VPS8-210ENST00000446204 MRPL50Q8N5N7 158 aaKnown RBP9.58□□□□□ -0.88
VPS8-210ENST00000446204 PLEKHO1Q53GL0 409 aaPredicted RBP9.58□□□□□ -0.88
VPS8-210ENST00000446204 MPNDQ8N594 471 aa9.58□□□□□ -0.88
VPS8-210ENST00000446204 MBD5Q9P267 1494 aa9.58□□□□□ -0.88
VPS8-210ENST00000446204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.57□□□□□ -0.88
VPS8-210ENST00000446204 F6X3S4 739 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
VPS8-210ENST00000446204 KRT85P78386 507 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 TOMM22Q9NS69 142 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 MAST1Q9Y2H9 1570 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 ANKRD1Q15327 319 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 ZSCAN31Q96LW9 406 aaPredicted RBP9.57□□□□□ -0.88
VPS8-210ENST00000446204 FAM83GA6ND36 823 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 NPHP1O15259 732 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 CWC27Q6UX04 472 aaKnown RBP9.57□□□□□ -0.88
VPS8-210ENST00000446204 FBLN1P23142 703 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 FOSBP53539 338 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
VPS8-210ENST00000446204 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 RAPGEF4Q8WZA2 1011 aa9.57□□□□□ -0.88
VPS8-210ENST00000446204 TARBP1Q13395 1621 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms