RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 HMOX1P09601 288 aa18.88■□□□□ 0.61
CHFR-204ENST00000443047 MAP7D2Q96T17 732 aa18.88■□□□□ 0.61
CHFR-204ENST00000443047 TRIM35Q9UPQ4 493 aa18.88■□□□□ 0.61
CHFR-204ENST00000443047 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
CHFR-204ENST00000443047 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
CHFR-204ENST00000443047 EXOSC9Q06265 439 aaKnown RBP18.87■□□□□ 0.61
CHFR-204ENST00000443047 GBP4Q96PP9 640 aa18.87■□□□□ 0.61
CHFR-204ENST00000443047 NCLP19338 710 aaKnown RBP18.87■□□□□ 0.61
CHFR-204ENST00000443047 AGLP35573 1532 aa18.87■□□□□ 0.61
CHFR-204ENST00000443047 HSP90AB1P08238 724 aaKnown RBP18.87■□□□□ 0.61
CHFR-204ENST00000443047 NINLQ9Y2I6 1382 aa18.86■□□□□ 0.61
CHFR-204ENST00000443047 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
CHFR-204ENST00000443047 PDE4CQ08493 712 aa18.86■□□□□ 0.61
CHFR-204ENST00000443047 PDE3AQ14432 1141 aa18.86■□□□□ 0.61
CHFR-204ENST00000443047 POLKQ9UBT6 870 aa18.86■□□□□ 0.61
CHFR-204ENST00000443047 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
CHFR-204ENST00000443047 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
CHFR-204ENST00000443047 WASLO00401 505 aaPredicted RBP18.85■□□□□ 0.61
CHFR-204ENST00000443047 CCDC27Q2M243 656 aa18.85■□□□□ 0.61
CHFR-204ENST00000443047 THUMPD2Q9BTF0 503 aaKnown RBP18.84■□□□□ 0.61
CHFR-204ENST00000443047 COL3A1P02461 1466 aaPredicted RBP18.84■□□□□ 0.61
CHFR-204ENST00000443047 SMAP1Q8IYB5 467 aaPredicted RBP18.84■□□□□ 0.61
CHFR-204ENST00000443047 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
CHFR-204ENST00000443047 RRS1Q15050 365 aaKnown RBP18.84■□□□□ 0.61
CHFR-204ENST00000443047 PRKAR2BP31323 418 aa18.83■□□□□ 0.61
CHFR-204ENST00000443047 DDX49Q9Y6V7 483 aaKnown RBP18.83■□□□□ 0.61
CHFR-204ENST00000443047 NUDT16Q96DE0 195 aaKnown RBP18.83■□□□□ 0.6
CHFR-204ENST00000443047 KIF13AQ9H1H9 1805 aa18.82■□□□□ 0.6
CHFR-204ENST00000443047 PHACTR3Q96KR7 559 aa18.82■□□□□ 0.6
CHFR-204ENST00000443047 SKOR2Q2VWA4 1001 aaPredicted RBP18.82■□□□□ 0.6
CHFR-204ENST00000443047 PPP1R9BQ96SB3 815 aa18.82■□□□□ 0.6
CHFR-204ENST00000443047 PPIP5K1Q6PFW1 1433 aa18.82■□□□□ 0.6
CHFR-204ENST00000443047 SLC26A8Q96RN1 970 aa18.81■□□□□ 0.6
CHFR-204ENST00000443047 BBXQ8WY36 941 aaPredicted RBP18.81■□□□□ 0.6
CHFR-204ENST00000443047 RWDD1Q9H446 243 aaPredicted RBP18.81■□□□□ 0.6
CHFR-204ENST00000443047 SMC4Q9NTJ3 1288 aa18.81■□□□□ 0.6
CHFR-204ENST00000443047 REREQ9P2R6 1566 aa18.8■□□□□ 0.6
CHFR-204ENST00000443047 SOX12O15370 315 aa18.8■□□□□ 0.6
CHFR-204ENST00000443047 LTKP29376 864 aa18.8■□□□□ 0.6
CHFR-204ENST00000443047 SSH1Q8WYL5 1049 aa18.8■□□□□ 0.6
CHFR-204ENST00000443047 NRXN3Q9Y4C0 1643 aa18.79■□□□□ 0.6
CHFR-204ENST00000443047 TNRQ92752 1358 aa18.79■□□□□ 0.6
CHFR-204ENST00000443047 SETD1AO15047 1707 aaKnown RBP18.78■□□□□ 0.6
CHFR-204ENST00000443047 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
CHFR-204ENST00000443047 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHFR-204ENST00000443047 ADGRB2O60241 1585 aa18.77■□□□□ 0.6
CHFR-204ENST00000443047 FTSJ3Q8IY81 847 aaKnown RBP18.77■□□□□ 0.59
CHFR-204ENST00000443047 JARID2Q92833 1246 aaPredicted RBP18.77■□□□□ 0.59
CHFR-204ENST00000443047 GOLGA6L22H0YM25 854 aa18.76■□□□□ 0.59
CHFR-204ENST00000443047 ELL2O00472 640 aaPredicted RBP18.76■□□□□ 0.59
CHFR-204ENST00000443047 SSFA2P28290 1259 aa18.76■□□□□ 0.59
CHFR-204ENST00000443047 TERF1P54274 439 aa18.76■□□□□ 0.59
CHFR-204ENST00000443047 PNPLA6Q8IY17 1366 aa18.76■□□□□ 0.59
CHFR-204ENST00000443047 ROBO2Q9HCK4 1378 aa18.76■□□□□ 0.59
CHFR-204ENST00000443047 NOB1Q9ULX3 412 aaKnown RBP18.75■□□□□ 0.59
CHFR-204ENST00000443047 CCDC61Q9Y6R9 512 aa18.75■□□□□ 0.59
CHFR-204ENST00000443047 TRIM27P14373 513 aa18.75■□□□□ 0.59
CHFR-204ENST00000443047 CBX1P83916 185 aa18.75■□□□□ 0.59
CHFR-204ENST00000443047 RAB3GAP1Q15042 981 aa18.75■□□□□ 0.59
CHFR-204ENST00000443047 ZKSCAN2Q63HK3 967 aa18.75■□□□□ 0.59
CHFR-204ENST00000443047 CAVIN1Q6NZI2 390 aaKnown RBP18.75■□□□□ 0.59
CHFR-204ENST00000443047 TSC1Q92574 1164 aa18.75■□□□□ 0.59
CHFR-204ENST00000443047 DZIP1LQ8IYY4 767 aaKnown RBP18.74■□□□□ 0.59
CHFR-204ENST00000443047 CPS1P31327 1500 aa18.74■□□□□ 0.59
CHFR-204ENST00000443047 MAP2P11137 1827 aaKnown RBP18.73■□□□□ 0.59
CHFR-204ENST00000443047 KIF20BQ96Q89 1820 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 MED14O60244 1454 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 ANKRD26Q9UPS8 1709 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 DNTTIP2Q5QJE6 756 aaKnown RBP18.73■□□□□ 0.59
CHFR-204ENST00000443047 TMEM2Q9UHN6 1383 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 DLC1Q96QB1 1528 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 DYNC1I1O14576 645 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 ITPRIPQ8IWB1 547 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 COG3Q96JB2 828 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 NOL7Q9UMY1 257 aaKnown RBP18.73■□□□□ 0.59
CHFR-204ENST00000443047 LRRC7Q96NW7 1537 aa18.73■□□□□ 0.59
CHFR-204ENST00000443047 FAM83GA6ND36 823 aa18.72■□□□□ 0.59
CHFR-204ENST00000443047 FCHSD2O94868 740 aa18.72■□□□□ 0.59
CHFR-204ENST00000443047 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
CHFR-204ENST00000443047 MVPQ14764 893 aaKnown RBP18.72■□□□□ 0.59
CHFR-204ENST00000443047 MTERF4Q7Z6M4 381 aaKnown RBP18.72■□□□□ 0.59
CHFR-204ENST00000443047 CPSF1Q10570 1443 aaKnown RBP18.72■□□□□ 0.59
CHFR-204ENST00000443047 ATP7BP35670 1465 aa18.71■□□□□ 0.59
CHFR-204ENST00000443047 DMTNQ08495 405 aa18.71■□□□□ 0.59
CHFR-204ENST00000443047 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
CHFR-204ENST00000443047 IL13P35225 146 aa18.71■□□□□ 0.59
CHFR-204ENST00000443047 DDIT3P35638 169 aa18.71■□□□□ 0.59
CHFR-204ENST00000443047 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.71■□□□□ 0.59
CHFR-204ENST00000443047 MCTP1Q6DN14 999 aa18.7■□□□□ 0.58
CHFR-204ENST00000443047 MPNDQ8N594 471 aa18.7■□□□□ 0.58
CHFR-204ENST00000443047 CD2BP2O95400 341 aaKnown RBP18.7■□□□□ 0.58
CHFR-204ENST00000443047 ZSCAN20P17040 1043 aaPredicted RBP18.7■□□□□ 0.58
CHFR-204ENST00000443047 HDGFP51858 240 aaKnown RBP18.7■□□□□ 0.58
CHFR-204ENST00000443047 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
CHFR-204ENST00000443047 RBSNQ9H1K0 784 aa18.7■□□□□ 0.58
CHFR-204ENST00000443047 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
CHFR-204ENST00000443047 CCDC94Q9BW85 323 aaPredicted RBP18.69■□□□□ 0.58
CHFR-204ENST00000443047 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
CHFR-204ENST00000443047 TMEM57Q8N5G2 664 aa18.69■□□□□ 0.58
CHFR-204ENST00000443047 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms