RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 NME9Q86XW9 330 aa19.3■□□□□ 0.68
APP-208ENST00000439274 ZNF692Q9BU19 519 aaPredicted RBP19.29■□□□□ 0.68
APP-208ENST00000439274 MBIPQ9NS73 344 aa19.29■□□□□ 0.68
APP-208ENST00000439274 MAP2P11137 1827 aaKnown RBP19.29■□□□□ 0.68
APP-208ENST00000439274 RBM25P49756 843 aaKnown RBP19.29■□□□□ 0.68
APP-208ENST00000439274 L1TD1Q5T7N2 865 aaKnown RBP19.29■□□□□ 0.68
APP-208ENST00000439274 FAM43AQ8N2R8 423 aa19.29■□□□□ 0.68
APP-208ENST00000439274 BRPF1P55201 1214 aaPredicted RBP19.28■□□□□ 0.68
APP-208ENST00000439274 IL13P35225 146 aa19.28■□□□□ 0.68
APP-208ENST00000439274 SIRT2Q8IXJ6 389 aa19.27■□□□□ 0.68
APP-208ENST00000439274 ATP7BP35670 1465 aa19.27■□□□□ 0.68
APP-208ENST00000439274 NCKAP5LQ9HCH0 1330 aa19.27■□□□□ 0.68
APP-208ENST00000439274 ZNF428Q96B54 188 aa19.27■□□□□ 0.68
APP-208ENST00000439274 FER1L4A9Z1Z3 1794 aa19.27■□□□□ 0.67
APP-208ENST00000439274 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
APP-208ENST00000439274 TRAK2O60296 914 aa19.26■□□□□ 0.67
APP-208ENST00000439274 BMP2KLQ5H9B9 411 aa19.26■□□□□ 0.67
APP-208ENST00000439274 IFT57Q9NWB7 429 aa19.26■□□□□ 0.67
APP-208ENST00000439274 C3P01024 1663 aa19.26■□□□□ 0.67
APP-208ENST00000439274 PTCH1Q13635 1447 aa19.26■□□□□ 0.67
APP-208ENST00000439274 GNAI1P63096 354 aa19.26■□□□□ 0.67
APP-208ENST00000439274 RRS1Q15050 365 aaKnown RBP19.26■□□□□ 0.67
APP-208ENST00000439274 C8orf58Q8NAV2 365 aa19.26■□□□□ 0.67
APP-208ENST00000439274 ESF1Q9H501 851 aaKnown RBP19.26■□□□□ 0.67
APP-208ENST00000439274 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
APP-208ENST00000439274 XRCC6P12956 609 aaKnown RBP eCLIP19.25■□□□□ 0.67
APP-208ENST00000439274 GOLGA6L3A6NEY3 463 aa19.25■□□□□ 0.67
APP-208ENST00000439274 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
APP-208ENST00000439274 TWISTNBQ3B726 338 aaPredicted RBP19.25■□□□□ 0.67
APP-208ENST00000439274 TNRQ92752 1358 aa19.24■□□□□ 0.67
APP-208ENST00000439274 PIK3R4Q99570 1358 aa19.24■□□□□ 0.67
APP-208ENST00000439274 DCTN1Q14203 1278 aa19.24■□□□□ 0.67
APP-208ENST00000439274 ARHGAP45Q92619 1136 aa19.24■□□□□ 0.67
APP-208ENST00000439274 GCC1Q96CN9 775 aa19.24■□□□□ 0.67
APP-208ENST00000439274 UBR1Q8IWV7 1749 aa19.24■□□□□ 0.67
APP-208ENST00000439274 RIMS2Q9UQ26 1411 aa19.24■□□□□ 0.67
APP-208ENST00000439274 NCOA3Q9Y6Q9 1424 aa19.24■□□□□ 0.67
APP-208ENST00000439274 CALD1Q05682 793 aaKnown RBP19.24■□□□□ 0.67
APP-208ENST00000439274 KIF2CQ99661 725 aa19.24■□□□□ 0.67
APP-208ENST00000439274 ABCC4O15439 1325 aa19.24■□□□□ 0.67
APP-208ENST00000439274 FSD2A1L4K1 749 aa19.23■□□□□ 0.67
APP-208ENST00000439274 DDIT3P35638 169 aa19.23■□□□□ 0.67
APP-208ENST00000439274 PANK2Q9BZ23 570 aa19.23■□□□□ 0.67
APP-208ENST00000439274 NRXN3Q9Y4C0 1643 aa19.23■□□□□ 0.67
APP-208ENST00000439274 CD2BP2O95400 341 aaKnown RBP19.23■□□□□ 0.67
APP-208ENST00000439274 TBC1D9Q6ZT07 1266 aa19.23■□□□□ 0.67
APP-208ENST00000439274 SNX21Q969T3 373 aa19.23■□□□□ 0.67
APP-208ENST00000439274 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
APP-208ENST00000439274 DLC1Q96QB1 1528 aa19.22■□□□□ 0.67
APP-208ENST00000439274 WASLO00401 505 aaPredicted RBP19.22■□□□□ 0.67
APP-208ENST00000439274 HSP90AB1P08238 724 aaKnown RBP19.22■□□□□ 0.67
APP-208ENST00000439274 RRAGDQ9NQL2 400 aaPredicted RBP19.22■□□□□ 0.67
APP-208ENST00000439274 CPSF1Q10570 1443 aaKnown RBP19.22■□□□□ 0.67
APP-208ENST00000439274 EDC4Q6P2E9 1401 aaKnown RBP19.22■□□□□ 0.67
APP-208ENST00000439274 TXNDC2Q86VQ3 553 aa19.21■□□□□ 0.67
APP-208ENST00000439274 RBM42Q9BTD8 480 aaKnown RBP19.21■□□□□ 0.67
APP-208ENST00000439274 CFAP44Q96MT7 982 aa19.2■□□□□ 0.66
APP-208ENST00000439274 CDK12Q9NYV4 1490 aaPredicted RBP19.2■□□□□ 0.66
APP-208ENST00000439274 TNPO1Q92973 898 aaKnown RBP19.19■□□□□ 0.66
APP-208ENST00000439274 CPS1P31327 1500 aa19.19■□□□□ 0.66
APP-208ENST00000439274 CEBPAP49715 358 aaPredicted RBP19.19■□□□□ 0.66
APP-208ENST00000439274 NUDT16Q96DE0 195 aaKnown RBP19.19■□□□□ 0.66
APP-208ENST00000439274 COG3Q96JB2 828 aa19.19■□□□□ 0.66
APP-208ENST00000439274 CHMP4BQ9H444 224 aaKnown RBP19.19■□□□□ 0.66
APP-208ENST00000439274 METP08581 1390 aa19.19■□□□□ 0.66
APP-208ENST00000439274 DLG5Q8TDM6 1919 aa19.19■□□□□ 0.66
APP-208ENST00000439274 DDX11L8A8MPP1 907 aa19.17■□□□□ 0.66
APP-208ENST00000439274 KRT24Q2M2I5 525 aa19.17■□□□□ 0.66
APP-208ENST00000439274 GSPT1P15170 499 aaKnown RBP19.16■□□□□ 0.66
APP-208ENST00000439274 AEBP1Q8IUX7 1158 aa19.16■□□□□ 0.66
APP-208ENST00000439274 API5Q9BZZ5 524 aaKnown RBP19.16■□□□□ 0.66
APP-208ENST00000439274 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
APP-208ENST00000439274 AATKQ6ZMQ8 1374 aa19.16■□□□□ 0.66
APP-208ENST00000439274 KNDC1Q76NI1 1749 aa19.15■□□□□ 0.66
APP-208ENST00000439274 HSP90AA1P07900 732 aaKnown RBP19.15■□□□□ 0.66
APP-208ENST00000439274 EIF5BO60841 1220 aaKnown RBP19.14■□□□□ 0.65
APP-208ENST00000439274 C16orf71Q8IYS4 520 aaPredicted RBP19.14■□□□□ 0.65
APP-208ENST00000439274 RAB3GAP1Q15042 981 aa19.13■□□□□ 0.65
APP-208ENST00000439274 PLEKHM2Q8IWE5 1019 aa19.13■□□□□ 0.65
APP-208ENST00000439274 CCDC61Q9Y6R9 512 aa19.13■□□□□ 0.65
APP-208ENST00000439274 K7ELQ4 463 aaPredicted RBP19.13■□□□□ 0.65
APP-208ENST00000439274 CDC45O75419 566 aa19.13■□□□□ 0.65
APP-208ENST00000439274 GAS2L2Q8NHY3 880 aa19.12■□□□□ 0.65
APP-208ENST00000439274 CIZ1Q9ULV3 898 aaPredicted RBP19.12■□□□□ 0.65
APP-208ENST00000439274 TMEM2Q9UHN6 1383 aa19.11■□□□□ 0.65
APP-208ENST00000439274 SULT6B1Q6IMI4 303 aa19.11■□□□□ 0.65
APP-208ENST00000439274 RIMS1Q86UR5 1692 aaKnown RBP19.11■□□□□ 0.65
APP-208ENST00000439274 PRR36Q9H6K5 1346 aa19.11■□□□□ 0.65
APP-208ENST00000439274 OTUD7AQ8TE49 926 aaPredicted RBP19.11■□□□□ 0.65
APP-208ENST00000439274 MRE11P49959 708 aa19.1■□□□□ 0.65
APP-208ENST00000439274 EIF4A2Q14240 407 aaKnown RBP19.1■□□□□ 0.65
APP-208ENST00000439274 MCM10Q7L590 875 aa19.1■□□□□ 0.65
APP-208ENST00000439274 DCTPP1Q9H773 170 aa19.1■□□□□ 0.65
APP-208ENST00000439274 GBP4Q96PP9 640 aa19.1■□□□□ 0.65
APP-208ENST00000439274 GRPEL1Q9HAV7 217 aa19.1■□□□□ 0.65
APP-208ENST00000439274 APBB1O00213 710 aa19.09■□□□□ 0.65
APP-208ENST00000439274 MON2Q7Z3U7 1717 aa19.09■□□□□ 0.65
APP-208ENST00000439274 SSFA2P28290 1259 aa19.09■□□□□ 0.65
APP-208ENST00000439274 INTS3Q68E01 1043 aaKnown RBP19.08■□□□□ 0.65
APP-208ENST00000439274 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms