RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 CABP1Q9NZU7 370 aa10.98□□□□□ -0.65
VPS8-207ENST00000436792 USP21Q9UK80 565 aa10.98□□□□□ -0.65
VPS8-207ENST00000436792 MTMR7Q9Y216 660 aa10.98□□□□□ -0.65
VPS8-207ENST00000436792 BTBD11A6QL63 1104 aa10.98□□□□□ -0.65
VPS8-207ENST00000436792 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
VPS8-207ENST00000436792 IFNL2Q8IZJ0 200 aa10.98□□□□□ -0.65
VPS8-207ENST00000436792 SETDB2Q96T68 719 aa10.98□□□□□ -0.65
VPS8-207ENST00000436792 ZNF76P36508 570 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 CFAP70Q5T0N1 1121 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 SUPT16HQ9Y5B9 1047 aaKnown RBP10.97□□□□□ -0.65
VPS8-207ENST00000436792 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
VPS8-207ENST00000436792 PTCD1O75127 700 aaKnown RBP10.97□□□□□ -0.65
VPS8-207ENST00000436792 KRT18P05783 430 aaKnown RBP10.97□□□□□ -0.65
VPS8-207ENST00000436792 TXLNAP40222 546 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 SPTY2D1Q68D10 685 aaPredicted RBP10.97□□□□□ -0.65
VPS8-207ENST00000436792 OTUD7BQ6GQQ9 843 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 B4GALNT3Q6L9W6 998 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 DZIP1Q86YF9 867 aaKnown RBP10.97□□□□□ -0.65
VPS8-207ENST00000436792 REC8O95072 547 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 EPS15P42566 896 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 BRDTQ58F21 947 aaPredicted RBP10.97□□□□□ -0.65
VPS8-207ENST00000436792 LRP2BPQ9P2M1 347 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 DDX19BQ9UMR2 479 aa10.97□□□□□ -0.65
VPS8-207ENST00000436792 GBP4Q96PP9 640 aa10.96□□□□□ -0.65
VPS8-207ENST00000436792 SLKQ9H2G2 1235 aaPredicted RBP10.96□□□□□ -0.65
VPS8-207ENST00000436792 AKAP2Q9Y2D5 859 aa10.96□□□□□ -0.65
VPS8-207ENST00000436792 NINLQ9Y2I6 1382 aa10.96□□□□□ -0.65
VPS8-207ENST00000436792 SUPT20HQ8NEM7 779 aa10.96□□□□□ -0.65
VPS8-207ENST00000436792 C9orf84Q5VXU9 1444 aa10.96□□□□□ -0.65
VPS8-207ENST00000436792 SSFA2P28290 1259 aa10.96□□□□□ -0.66
VPS8-207ENST00000436792 POLA1P09884 1462 aaPredicted RBP10.96□□□□□ -0.66
VPS8-207ENST00000436792 SENP3-EIF4A1A0A087X0R7 540 aa10.96□□□□□ -0.66
VPS8-207ENST00000436792 LPXNO60711 386 aa10.96□□□□□ -0.66
VPS8-207ENST00000436792 APBA3O96018 575 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 POLR3DP05423 398 aaPredicted RBP10.95□□□□□ -0.66
VPS8-207ENST00000436792 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
VPS8-207ENST00000436792 FMNL2Q96PY5 1086 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 CCER2I3L3R5 266 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 SULT6B1Q6IMI4 303 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 CUL5Q93034 780 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 GTF3C3Q9Y5Q9 886 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 UHRF1BP1LA0JNW5 1464 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 USP5P45974 858 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 CHMP4BP1P59074 171 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 RCAN3Q9UKA8 241 aa10.95□□□□□ -0.66
VPS8-207ENST00000436792 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
VPS8-207ENST00000436792 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
VPS8-207ENST00000436792 MCTP1Q6DN14 999 aa10.94□□□□□ -0.66
VPS8-207ENST00000436792 TRMT112Q9UI30 125 aaKnown RBP10.94□□□□□ -0.66
VPS8-207ENST00000436792 NEBLO76041 1014 aa10.94□□□□□ -0.66
VPS8-207ENST00000436792 ERBINQ96RT1 1412 aa10.94□□□□□ -0.66
VPS8-207ENST00000436792 BAG3O95817 575 aa10.93□□□□□ -0.66
VPS8-207ENST00000436792 SYCP1Q15431 976 aa10.93□□□□□ -0.66
VPS8-207ENST00000436792 ZBTB24O43167 697 aaPredicted RBP10.93□□□□□ -0.66
VPS8-207ENST00000436792 GSTO1P78417 241 aa10.93□□□□□ -0.66
VPS8-207ENST00000436792 TPTE2Q6XPS3 522 aa10.93□□□□□ -0.66
VPS8-207ENST00000436792 NLRP3Q96P20 1036 aa10.93□□□□□ -0.66
VPS8-207ENST00000436792 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
VPS8-207ENST00000436792 ANO2Q9NQ90 1003 aa10.93□□□□□ -0.66
VPS8-207ENST00000436792 OFD1O75665 1012 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 PSMA5P28066 241 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 MYL6BP14649 208 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 CA8P35219 290 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 ZGPATQ8N5A5 531 aaKnown RBP10.92□□□□□ -0.66
VPS8-207ENST00000436792 ZCRB1Q8TBF4 217 aaKnown RBP10.92□□□□□ -0.66
VPS8-207ENST00000436792 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 SLC5A1P13866 664 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 TNNT3P45378 269 aaPredicted RBP10.92□□□□□ -0.66
VPS8-207ENST00000436792 IRX6P78412 446 aaPredicted RBP10.92□□□□□ -0.66
VPS8-207ENST00000436792 SRCIN1Q9C0H9 1055 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 EFCAB5A4FU69 1503 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 ZNF644Q9H582 1327 aaPredicted RBP10.92□□□□□ -0.66
VPS8-207ENST00000436792 GRIN2AQ12879 1464 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
VPS8-207ENST00000436792 ZFYVE27Q5T4F4 411 aa10.92□□□□□ -0.66
VPS8-207ENST00000436792 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
VPS8-207ENST00000436792 USP47Q96K76 1375 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 GNAT3A8MTJ3 354 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 LARP1Q6PKG0 1096 aaKnown RBP10.91□□□□□ -0.66
VPS8-207ENST00000436792 TRIM22Q8IYM9 498 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 NFE2L2Q16236 605 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 CCDC70Q6NSX1 233 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 ZC3H12CQ9C0D7 883 aaKnown RBP10.91□□□□□ -0.66
VPS8-207ENST00000436792 LRRFIP2Q9Y608 721 aaKnown RBP10.91□□□□□ -0.66
VPS8-207ENST00000436792 ATP6V1AP38606 617 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 METTL24Q5JXM2 366 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 PDCL3Q9H2J4 239 aa10.91□□□□□ -0.66
VPS8-207ENST00000436792 RRP12Q5JTH9 1297 aaKnown RBP10.9□□□□□ -0.66
VPS8-207ENST00000436792 CNTROBQ8N137 903 aa10.9□□□□□ -0.66
VPS8-207ENST00000436792 ANKRD45Q5TZF3 282 aa10.9□□□□□ -0.66
VPS8-207ENST00000436792 PRKAG2Q9UGJ0 569 aa10.9□□□□□ -0.66
VPS8-207ENST00000436792 ANKRD18BA2A2Z9 1011 aa10.9□□□□□ -0.66
VPS8-207ENST00000436792 MATR3P43243 847 aaKnown RBP eCLIP10.9□□□□□ -0.66
VPS8-207ENST00000436792 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
VPS8-207ENST00000436792 IL2RBP14784 551 aa10.9□□□□□ -0.67
VPS8-207ENST00000436792 TDO2P48775 406 aa10.9□□□□□ -0.67
VPS8-207ENST00000436792 IFIT5Q13325 482 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms