RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ZMYND15Q9H091 742 aa16.77■□□□□ 0.28
SGMS1-203ENST00000429490 VAMP4O75379 141 aa16.77■□□□□ 0.27
SGMS1-203ENST00000429490 EIF2S2P20042 333 aaKnown RBP16.77■□□□□ 0.27
SGMS1-203ENST00000429490 AMPHP49418 695 aa16.77■□□□□ 0.27
SGMS1-203ENST00000429490 FBXO31Q5XUX0 539 aaPredicted RBP16.77■□□□□ 0.27
SGMS1-203ENST00000429490 MAST1Q9Y2H9 1570 aa16.76■□□□□ 0.27
SGMS1-203ENST00000429490 FANCAO15360 1455 aa16.76■□□□□ 0.27
SGMS1-203ENST00000429490 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
SGMS1-203ENST00000429490 SNX21Q969T3 373 aa16.76■□□□□ 0.27
SGMS1-203ENST00000429490 ATP10AO60312 1499 aa16.76■□□□□ 0.27
SGMS1-203ENST00000429490 FSD2A1L4K1 749 aa16.76■□□□□ 0.27
SGMS1-203ENST00000429490 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
SGMS1-203ENST00000429490 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
SGMS1-203ENST00000429490 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
SGMS1-203ENST00000429490 RBM25P49756 843 aaKnown RBP16.76■□□□□ 0.27
SGMS1-203ENST00000429490 ERC2O15083 957 aa16.75■□□□□ 0.27
SGMS1-203ENST00000429490 NAP1L2Q9ULW6 460 aaPredicted RBP16.75■□□□□ 0.27
SGMS1-203ENST00000429490 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
SGMS1-203ENST00000429490 ABCA8O94911 1581 aa16.75■□□□□ 0.27
SGMS1-203ENST00000429490 IL1RAPL2Q9NP60 686 aa16.75■□□□□ 0.27
SGMS1-203ENST00000429490 ABCC11Q96J66 1382 aa16.75■□□□□ 0.27
SGMS1-203ENST00000429490 TPM2P07951 284 aa16.75■□□□□ 0.27
SGMS1-203ENST00000429490 PKP1Q13835 747 aa16.75■□□□□ 0.27
SGMS1-203ENST00000429490 KLHL40Q2TBA0 621 aa16.75■□□□□ 0.27
SGMS1-203ENST00000429490 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
SGMS1-203ENST00000429490 SDSP20132 328 aa16.74■□□□□ 0.27
SGMS1-203ENST00000429490 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
SGMS1-203ENST00000429490 ZSCAN23Q3MJ62 389 aa16.74■□□□□ 0.27
SGMS1-203ENST00000429490 MRPL50Q8N5N7 158 aaKnown RBP16.74■□□□□ 0.27
SGMS1-203ENST00000429490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.74■□□□□ 0.277e-9■■■□□ 17.9
SGMS1-203ENST00000429490 MEIS3Q99687 375 aa16.74■□□□□ 0.27
SGMS1-203ENST00000429490 ABCC2Q92887 1545 aa16.73■□□□□ 0.27
SGMS1-203ENST00000429490 ADCY10Q96PN6 1610 aa16.73■□□□□ 0.27
SGMS1-203ENST00000429490 UQCRHLA0A096LP55 91 aa16.73■□□□□ 0.27
SGMS1-203ENST00000429490 DTNBO60941 627 aa16.73■□□□□ 0.27
SGMS1-203ENST00000429490 UQCRHP07919 91 aa16.73■□□□□ 0.27
SGMS1-203ENST00000429490 POLKQ9UBT6 870 aa16.73■□□□□ 0.27
SGMS1-203ENST00000429490 FIBPO43427 364 aa16.72■□□□□ 0.27
SGMS1-203ENST00000429490 FGD1P98174 961 aa16.72■□□□□ 0.27
SGMS1-203ENST00000429490 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
SGMS1-203ENST00000429490 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
SGMS1-203ENST00000429490 VPS37CA5D8V6 355 aaPredicted RBP16.71■□□□□ 0.27
SGMS1-203ENST00000429490 ERBB4Q15303 1308 aa16.71■□□□□ 0.27
SGMS1-203ENST00000429490 NCKAP5LQ9HCH0 1330 aa16.71■□□□□ 0.27
SGMS1-203ENST00000429490 CROCC2H7BZ55 1655 aa16.71■□□□□ 0.27
SGMS1-203ENST00000429490 TTC37Q6PGP7 1564 aa16.71■□□□□ 0.27
SGMS1-203ENST00000429490 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
SGMS1-203ENST00000429490 TTC22Q5TAA0 569 aa16.71■□□□□ 0.27
SGMS1-203ENST00000429490 PLEKHM2Q8IWE5 1019 aa16.71■□□□□ 0.27
SGMS1-203ENST00000429490 AEBP1Q8IUX7 1158 aa16.71■□□□□ 0.27
SGMS1-203ENST00000429490 IFT57Q9NWB7 429 aa16.71■□□□□ 0.27
SGMS1-203ENST00000429490 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
SGMS1-203ENST00000429490 IL16Q14005 1332 aa16.7■□□□□ 0.26
SGMS1-203ENST00000429490 CWC22Q9HCG8 908 aaKnown RBP16.7■□□□□ 0.26
SGMS1-203ENST00000429490 PHF14O94880 888 aa16.69■□□□□ 0.26
SGMS1-203ENST00000429490 SYNMO15061 1565 aa16.69■□□□□ 0.26
SGMS1-203ENST00000429490 SURF6O75683 361 aaKnown RBP16.69■□□□□ 0.26
SGMS1-203ENST00000429490 RPAP2Q8IXW5 612 aaPredicted RBP16.68■□□□□ 0.26
SGMS1-203ENST00000429490 TSPY26PQ9H489 355 aa16.68■□□□□ 0.26
SGMS1-203ENST00000429490 CCDC9Q9Y3X0 531 aaKnown RBP16.68■□□□□ 0.26
SGMS1-203ENST00000429490 RBSNQ9H1K0 784 aa16.68■□□□□ 0.26
SGMS1-203ENST00000429490 ZNF830Q96NB3 372 aaPredicted RBP16.68■□□□□ 0.26
SGMS1-203ENST00000429490 CCDC39Q9UFE4 941 aa16.68■□□□□ 0.26
SGMS1-203ENST00000429490 MBD3O95983 291 aa16.67■□□□□ 0.26
SGMS1-203ENST00000429490 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
SGMS1-203ENST00000429490 SLC52A1Q9NWF4 448 aa16.67■□□□□ 0.26
SGMS1-203ENST00000429490 GSPT1P15170 499 aaKnown RBP16.67■□□□□ 0.26
SGMS1-203ENST00000429490 SPC24Q8NBT2 197 aa16.67■□□□□ 0.26
SGMS1-203ENST00000429490 GNAI2P04899 355 aa16.66■□□□□ 0.26
SGMS1-203ENST00000429490 NUTM1Q86Y26 1132 aa16.66■□□□□ 0.26
SGMS1-203ENST00000429490 PRDM10Q9NQV6 1147 aa16.66■□□□□ 0.26
SGMS1-203ENST00000429490 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
SGMS1-203ENST00000429490 NSD2O96028 1365 aa16.66■□□□□ 0.26
SGMS1-203ENST00000429490 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
SGMS1-203ENST00000429490 RTEL1-TNFRSF6BF6WH68 1400 aa16.66■□□□□ 0.26
SGMS1-203ENST00000429490 LRRCC1Q9C099 1032 aa16.65■□□□□ 0.26
SGMS1-203ENST00000429490 CSPP1Q1MSJ5 1256 aa16.65■□□□□ 0.26
SGMS1-203ENST00000429490 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
SGMS1-203ENST00000429490 USP26Q9BXU7 913 aa16.65■□□□□ 0.26
SGMS1-203ENST00000429490 NUDT16Q96DE0 195 aaKnown RBP16.64■□□□□ 0.25
SGMS1-203ENST00000429490 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.25
SGMS1-203ENST00000429490 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.25
SGMS1-203ENST00000429490 SIRT2Q8IXJ6 389 aa16.64■□□□□ 0.25
SGMS1-203ENST00000429490 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
SGMS1-203ENST00000429490 USP25Q9UHP3 1055 aa16.64■□□□□ 0.25
SGMS1-203ENST00000429490 DCTPP1Q9H773 170 aa16.63■□□□□ 0.25
SGMS1-203ENST00000429490 E9PCH4 1651 aa16.63■□□□□ 0.25
SGMS1-203ENST00000429490 ZNF518AQ6AHZ1 1483 aa16.63■□□□□ 0.25
SGMS1-203ENST00000429490 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
SGMS1-203ENST00000429490 ARHGAP45Q92619 1136 aa16.63■□□□□ 0.25
SGMS1-203ENST00000429490 ANKRD44Q8N8A2 993 aa16.62■□□□□ 0.25
SGMS1-203ENST00000429490 FOSBP53539 338 aa16.62■□□□□ 0.25
SGMS1-203ENST00000429490 PREX2Q70Z35 1606 aa16.61■□□□□ 0.25
SGMS1-203ENST00000429490 MX1P20591 662 aa16.61■□□□□ 0.25
SGMS1-203ENST00000429490 HSP90AB2PQ58FF8 381 aa16.61■□□□□ 0.25
SGMS1-203ENST00000429490 CWC27Q6UX04 472 aaKnown RBP16.61■□□□□ 0.25
SGMS1-203ENST00000429490 CCDC61Q9Y6R9 512 aa16.61■□□□□ 0.25
SGMS1-203ENST00000429490 PPIP5K1Q6PFW1 1433 aa16.61■□□□□ 0.25
SGMS1-203ENST00000429490 CEP85Q6P2H3 762 aa16.6■□□□□ 0.25
SGMS1-203ENST00000429490 PDCL3Q9H2J4 239 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms