RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
CACTIN-203ENST00000429344 ZNF692Q9BU19 519 aaPredicted RBP18.63■□□□□ 0.57
CACTIN-203ENST00000429344 ACEP12821 1306 aa18.62■□□□□ 0.57
CACTIN-203ENST00000429344 TPRNQ4KMQ1 711 aa18.62■□□□□ 0.57
CACTIN-203ENST00000429344 RBM42Q9BTD8 480 aaKnown RBP18.62■□□□□ 0.57
CACTIN-203ENST00000429344 GRPEL1Q9HAV7 217 aa18.61■□□□□ 0.57
CACTIN-203ENST00000429344 FCHSD2O94868 740 aa18.61■□□□□ 0.57
CACTIN-203ENST00000429344 SULT6B1Q6IMI4 303 aa18.61■□□□□ 0.57
CACTIN-203ENST00000429344 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
CACTIN-203ENST00000429344 PTPRMP28827 1452 aa18.6■□□□□ 0.57
CACTIN-203ENST00000429344 NLRP6P59044 892 aa18.6■□□□□ 0.57
CACTIN-203ENST00000429344 MYOM1P52179 1685 aa18.6■□□□□ 0.57
CACTIN-203ENST00000429344 TMEM131LA2VDJ0 1609 aa18.59■□□□□ 0.57
CACTIN-203ENST00000429344 DCTN1Q14203 1278 aa18.59■□□□□ 0.57
CACTIN-203ENST00000429344 DDX11L8A8MPP1 907 aa18.58■□□□□ 0.57
CACTIN-203ENST00000429344 MRE11P49959 708 aa18.58■□□□□ 0.57
CACTIN-203ENST00000429344 FOXD4L5Q5VV16 416 aaPredicted RBP18.58■□□□□ 0.57
CACTIN-203ENST00000429344 FOXD4L4Q8WXT5 416 aaPredicted RBP18.58■□□□□ 0.57
CACTIN-203ENST00000429344 TNPO1Q92973 898 aaKnown RBP18.58■□□□□ 0.57
CACTIN-203ENST00000429344 AGLP35573 1532 aa18.58■□□□□ 0.56
CACTIN-203ENST00000429344 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
CACTIN-203ENST00000429344 PHACTR3Q96KR7 559 aa18.57■□□□□ 0.56
CACTIN-203ENST00000429344 ARID3AQ99856 593 aa18.57■□□□□ 0.56
CACTIN-203ENST00000429344 CALD1Q05682 793 aaKnown RBP18.57■□□□□ 0.56
CACTIN-203ENST00000429344 GBP4Q96PP9 640 aa18.57■□□□□ 0.56
CACTIN-203ENST00000429344 IPO8O15397 1037 aaKnown RBP18.57■□□□□ 0.56
CACTIN-203ENST00000429344 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
CACTIN-203ENST00000429344 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
CACTIN-203ENST00000429344 MYO5BQ9ULV0 1848 aa18.56■□□□□ 0.56
CACTIN-203ENST00000429344 A0A0U1RQG5 324 aaPredicted RBP18.56■□□□□ 0.56
CACTIN-203ENST00000429344 ANP32BQ92688 251 aaKnown RBP18.56■□□□□ 0.56
CACTIN-203ENST00000429344 HSP90AA2PQ14568 343 aaPredicted RBP18.55■□□□□ 0.56
CACTIN-203ENST00000429344 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
CACTIN-203ENST00000429344 TTC21BQ7Z4L5 1316 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 PRR36Q9H6K5 1346 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 NFE2L2Q16236 605 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 FAM83GA6ND36 823 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 KCNA6P17658 529 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 CHD1LQ86WJ1 897 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 DDX49Q9Y6V7 483 aaKnown RBP18.54■□□□□ 0.56
CACTIN-203ENST00000429344 HSP90AB2PQ58FF8 381 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 ABTB2Q8N961 1025 aa18.54■□□□□ 0.56
CACTIN-203ENST00000429344 AEBP1Q8IUX7 1158 aa18.53■□□□□ 0.56
CACTIN-203ENST00000429344 AAMPQ13685 434 aa18.53■□□□□ 0.56
CACTIN-203ENST00000429344 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
CACTIN-203ENST00000429344 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
CACTIN-203ENST00000429344 ARHGEF40Q8TER5 1519 aa18.53■□□□□ 0.56
CACTIN-203ENST00000429344 ESPNB1AK53 854 aa18.53■□□□□ 0.56
CACTIN-203ENST00000429344 GOLGA6L22H0YM25 854 aa18.52■□□□□ 0.56
CACTIN-203ENST00000429344 SSFA2P28290 1259 aa18.52■□□□□ 0.56
CACTIN-203ENST00000429344 NLRP1Q9C000 1473 aa18.51■□□□□ 0.55
CACTIN-203ENST00000429344 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
CACTIN-203ENST00000429344 CD2BP2O95400 341 aaKnown RBP18.51■□□□□ 0.55
CACTIN-203ENST00000429344 GNAI1P63096 354 aa18.51■□□□□ 0.55
CACTIN-203ENST00000429344 GAS2L3Q86XJ1 694 aa18.51■□□□□ 0.55
CACTIN-203ENST00000429344 ESCO1Q5FWF5 840 aa18.5■□□□□ 0.55
CACTIN-203ENST00000429344 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
CACTIN-203ENST00000429344 MYO3AQ8NEV4 1616 aa18.5■□□□□ 0.55
CACTIN-203ENST00000429344 PSME1Q06323 249 aa18.5■□□□□ 0.55
CACTIN-203ENST00000429344 EDC4Q6P2E9 1401 aaKnown RBP18.5■□□□□ 0.55
CACTIN-203ENST00000429344 NOL8Q76FK4 1167 aaKnown RBP18.49■□□□□ 0.55
CACTIN-203ENST00000429344 PLEKHF1Q96S99 279 aa18.49■□□□□ 0.55
CACTIN-203ENST00000429344 FOXD4L6Q3SYB3 417 aaPredicted RBP18.49■□□□□ 0.55
CACTIN-203ENST00000429344 FOXD4L3Q6VB84 417 aaPredicted RBP18.49■□□□□ 0.55
CACTIN-203ENST00000429344 TBX22Q9Y458 520 aa18.49■□□□□ 0.55
CACTIN-203ENST00000429344 FSD2A1L4K1 749 aa18.48■□□□□ 0.55
CACTIN-203ENST00000429344 MCM10Q7L590 875 aa18.48■□□□□ 0.55
CACTIN-203ENST00000429344 HDAC1Q13547 482 aaPredicted RBP18.48■□□□□ 0.55
CACTIN-203ENST00000429344 MCTP1Q6DN14 999 aa18.48■□□□□ 0.55
CACTIN-203ENST00000429344 ZBTB40Q9NUA8 1239 aa18.48■□□□□ 0.55
CACTIN-203ENST00000429344 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
CACTIN-203ENST00000429344 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
CACTIN-203ENST00000429344 SMC5Q8IY18 1101 aa18.47■□□□□ 0.55
CACTIN-203ENST00000429344 CLCN1P35523 988 aa18.47■□□□□ 0.55
CACTIN-203ENST00000429344 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
CACTIN-203ENST00000429344 IL13P35225 146 aa18.46■□□□□ 0.55
CACTIN-203ENST00000429344 EIF4A2Q14240 407 aaKnown RBP18.46■□□□□ 0.55
CACTIN-203ENST00000429344 TBC1D9Q6ZT07 1266 aa18.46■□□□□ 0.55
CACTIN-203ENST00000429344 TSPYL6Q8N831 410 aa18.46■□□□□ 0.55
CACTIN-203ENST00000429344 ERBB4Q15303 1308 aa18.46■□□□□ 0.55
CACTIN-203ENST00000429344 MIS18AQ9NYP9 233 aa18.46■□□□□ 0.55
CACTIN-203ENST00000429344 NUCB1Q02818 461 aa18.46■□□□□ 0.54
CACTIN-203ENST00000429344 GAS2L2Q8NHY3 880 aa18.45■□□□□ 0.54
CACTIN-203ENST00000429344 NECTIN2Q92692 538 aa18.45■□□□□ 0.54
CACTIN-203ENST00000429344 CAVIN1Q6NZI2 390 aaKnown RBP18.44■□□□□ 0.54
CACTIN-203ENST00000429344 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
CACTIN-203ENST00000429344 NASPP49321 788 aaPredicted RBP18.44■□□□□ 0.54
CACTIN-203ENST00000429344 PLEKHG1Q9ULL1 1385 aa18.44■□□□□ 0.54
CACTIN-203ENST00000429344 K7ELQ4 463 aaPredicted RBP18.44■□□□□ 0.54
CACTIN-203ENST00000429344 ZMYND15Q9H091 742 aa18.43■□□□□ 0.54
CACTIN-203ENST00000429344 CT47B1P0C2W7 299 aaPredicted RBP18.43■□□□□ 0.54
CACTIN-203ENST00000429344 MSNP26038 577 aaKnown RBP18.43■□□□□ 0.54
CACTIN-203ENST00000429344 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
CACTIN-203ENST00000429344 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
CACTIN-203ENST00000429344 ATP7BP35670 1465 aa18.42■□□□□ 0.54
CACTIN-203ENST00000429344 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
CACTIN-203ENST00000429344 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
CACTIN-203ENST00000429344 CHAMP1Q96JM3 812 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms