RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 SLC4A10Q6U841 1118 aa14.77□□□□□ -0.05
ERCC1-204ENST00000423698 C16orf71Q8IYS4 520 aaPredicted RBP14.77□□□□□ -0.05
ERCC1-204ENST00000423698 WASLO00401 505 aaPredicted RBP14.76□□□□□ -0.05
ERCC1-204ENST00000423698 TBC1D32Q96NH3 1257 aa14.76□□□□□ -0.05
ERCC1-204ENST00000423698 ZBTB40Q9NUA8 1239 aa14.75□□□□□ -0.05
ERCC1-204ENST00000423698 FCHSD2O94868 740 aa14.75□□□□□ -0.05
ERCC1-204ENST00000423698 NFE2L2Q16236 605 aa14.75□□□□□ -0.05
ERCC1-204ENST00000423698 PTPRMP28827 1452 aa14.75□□□□□ -0.05
ERCC1-204ENST00000423698 ARHGAP31Q2M1Z3 1444 aa14.75□□□□□ -0.05
ERCC1-204ENST00000423698 ARHGEF28Q8N1W1 1705 aaKnown RBP14.75□□□□□ -0.05
ERCC1-204ENST00000423698 CD163L1Q9NR16 1453 aa14.75□□□□□ -0.05
ERCC1-204ENST00000423698 IPO8O15397 1037 aaKnown RBP14.75□□□□□ -0.05
ERCC1-204ENST00000423698 L1TD1Q5T7N2 865 aaKnown RBP14.75□□□□□ -0.05
ERCC1-204ENST00000423698 DIP2BQ9P265 1576 aa14.74□□□□□ -0.05
ERCC1-204ENST00000423698 SMARCA5O60264 1052 aaPredicted RBP14.74□□□□□ -0.05
ERCC1-204ENST00000423698 VAMP4O75379 141 aa14.74□□□□□ -0.05
ERCC1-204ENST00000423698 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
ERCC1-204ENST00000423698 MYO3AQ8NEV4 1616 aa14.74□□□□□ -0.05
ERCC1-204ENST00000423698 PPIP5K1Q6PFW1 1433 aa14.73□□□□□ -0.05
ERCC1-204ENST00000423698 ZC3H13Q5T200 1668 aaKnown RBP14.73□□□□□ -0.05
ERCC1-204ENST00000423698 OTUD7AQ8TE49 926 aaPredicted RBP14.72□□□□□ -0.05
ERCC1-204ENST00000423698 PREX1Q8TCU6 1659 aa14.72□□□□□ -0.05
ERCC1-204ENST00000423698 RIMS2Q9UQ26 1411 aa14.72□□□□□ -0.05
ERCC1-204ENST00000423698 F6X3S4 739 aa14.72□□□□□ -0.05
ERCC1-204ENST00000423698 IL13P35225 146 aa14.72□□□□□ -0.05
ERCC1-204ENST00000423698 TAF7LQ5H9L4 462 aa14.72□□□□□ -0.05
ERCC1-204ENST00000423698 RRP9O43818 475 aaKnown RBP14.72□□□□□ -0.05
ERCC1-204ENST00000423698 TSHZ3Q63HK5 1081 aa14.72□□□□□ -0.05
ERCC1-204ENST00000423698 CHD1LQ86WJ1 897 aa14.72□□□□□ -0.05
ERCC1-204ENST00000423698 PRR36Q9H6K5 1346 aa14.71□□□□□ -0.05
ERCC1-204ENST00000423698 NSD2O96028 1365 aa14.71□□□□□ -0.05
ERCC1-204ENST00000423698 CCDC61Q9Y6R9 512 aa14.71□□□□□ -0.05
ERCC1-204ENST00000423698 ERBB4Q15303 1308 aa14.71□□□□□ -0.06
ERCC1-204ENST00000423698 SIRT2Q8IXJ6 389 aa14.7□□□□□ -0.06
ERCC1-204ENST00000423698 BCL11BQ9C0K0 894 aaPredicted RBP14.7□□□□□ -0.06
ERCC1-204ENST00000423698 KIF16BQ96L93 1317 aa14.7□□□□□ -0.06
ERCC1-204ENST00000423698 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
ERCC1-204ENST00000423698 MRPL50Q8N5N7 158 aaKnown RBP14.7□□□□□ -0.06
ERCC1-204ENST00000423698 TPRNQ4KMQ1 711 aa14.7□□□□□ -0.06
ERCC1-204ENST00000423698 NINLQ9Y2I6 1382 aa14.69□□□□□ -0.06
ERCC1-204ENST00000423698 ZBTB7BO15156 539 aaPredicted RBP14.69□□□□□ -0.06
ERCC1-204ENST00000423698 CD2BP2O95400 341 aaKnown RBP14.69□□□□□ -0.06
ERCC1-204ENST00000423698 CLCN1P35523 988 aa14.69□□□□□ -0.06
ERCC1-204ENST00000423698 EIF4A2Q14240 407 aaKnown RBP14.69□□□□□ -0.06
ERCC1-204ENST00000423698 ALKQ9UM73 1620 aa14.69□□□□□ -0.06
ERCC1-204ENST00000423698 ZMYM3Q14202 1370 aa14.69□□□□□ -0.06
ERCC1-204ENST00000423698 LTKP29376 864 aa14.68□□□□□ -0.06
ERCC1-204ENST00000423698 TMEM131LA2VDJ0 1609 aa14.68□□□□□ -0.06
ERCC1-204ENST00000423698 CLTCQ00610 1675 aaKnown RBP14.68□□□□□ -0.06
ERCC1-204ENST00000423698 USHBP1Q8N6Y0 703 aa14.68□□□□□ -0.06
ERCC1-204ENST00000423698 ACEP12821 1306 aa14.68□□□□□ -0.06
ERCC1-204ENST00000423698 GNAI1P63096 354 aa14.68□□□□□ -0.06
ERCC1-204ENST00000423698 HSP90AB1P08238 724 aaKnown RBP14.67□□□□□ -0.06
ERCC1-204ENST00000423698 HSCBQ8IWL3 235 aa14.67□□□□□ -0.06
ERCC1-204ENST00000423698 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
ERCC1-204ENST00000423698 LRRC7Q96NW7 1537 aa14.67□□□□□ -0.06
ERCC1-204ENST00000423698 NUCB1Q02818 461 aa14.67□□□□□ -0.06
ERCC1-204ENST00000423698 HDAC1Q13547 482 aaPredicted RBP14.67□□□□□ -0.06
ERCC1-204ENST00000423698 FOXD4L5Q5VV16 416 aaPredicted RBP14.67□□□□□ -0.06
ERCC1-204ENST00000423698 FOXD4L4Q8WXT5 416 aaPredicted RBP14.67□□□□□ -0.06
ERCC1-204ENST00000423698 SMC5Q8IY18 1101 aa14.66□□□□□ -0.06
ERCC1-204ENST00000423698 NOL8Q76FK4 1167 aaKnown RBP14.66□□□□□ -0.06
ERCC1-204ENST00000423698 COL3A1P02461 1466 aaPredicted RBP14.66□□□□□ -0.06
ERCC1-204ENST00000423698 NLRP1Q9C000 1473 aa14.66□□□□□ -0.06
ERCC1-204ENST00000423698 SLC4A2P04920 1241 aa14.65□□□□□ -0.06
ERCC1-204ENST00000423698 G2E3Q7L622 706 aa14.65□□□□□ -0.06
ERCC1-204ENST00000423698 ANTXR1Q9H6X2 564 aa14.65□□□□□ -0.06
ERCC1-204ENST00000423698 ARHGEF40Q8TER5 1519 aa14.65□□□□□ -0.06
ERCC1-204ENST00000423698 ESPNB1AK53 854 aa14.64□□□□□ -0.07
ERCC1-204ENST00000423698 TBC1D9Q6ZT07 1266 aa14.64□□□□□ -0.07
ERCC1-204ENST00000423698 MEIS3Q99687 375 aa14.64□□□□□ -0.07
ERCC1-204ENST00000423698 PUS7Q96PZ0 661 aaKnown RBP14.64□□□□□ -0.07
ERCC1-204ENST00000423698 ZFYVE9O95405 1425 aa14.64□□□□□ -0.07
ERCC1-204ENST00000423698 TRAK2O60296 914 aa14.64□□□□□ -0.07
ERCC1-204ENST00000423698 AMPHP49418 695 aa14.64□□□□□ -0.07
ERCC1-204ENST00000423698 LMOD2Q6P5Q4 547 aa14.64□□□□□ -0.07
ERCC1-204ENST00000423698 TRIM44Q96DX7 344 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-204ENST00000423698 ROBO2Q9HCK4 1378 aa14.63□□□□□ -0.07
ERCC1-204ENST00000423698 DTNBO60941 627 aa14.63□□□□□ -0.07
ERCC1-204ENST00000423698 CPS1P31327 1500 aa14.63□□□□□ -0.07
ERCC1-204ENST00000423698 A2ML1A8K2U0 1454 aa14.63□□□□□ -0.07
ERCC1-204ENST00000423698 CHAMP1Q96JM3 812 aa14.63□□□□□ -0.07
ERCC1-204ENST00000423698 CFAP44Q96MT7 982 aa14.63□□□□□ -0.07
ERCC1-204ENST00000423698 MCM4P33991 863 aa14.62□□□□□ -0.07
ERCC1-204ENST00000423698 XPCQ01831 940 aaPredicted RBP14.62□□□□□ -0.07
ERCC1-204ENST00000423698 IFT57Q9NWB7 429 aa14.62□□□□□ -0.07
ERCC1-204ENST00000423698 MAP2P11137 1827 aaKnown RBP14.61□□□□□ -0.07
ERCC1-204ENST00000423698 CT47B1P0C2W7 299 aaPredicted RBP14.61□□□□□ -0.07
ERCC1-204ENST00000423698 ALDH1L2Q3SY69 923 aa14.61□□□□□ -0.07
ERCC1-204ENST00000423698 FOXD4L6Q3SYB3 417 aaPredicted RBP14.61□□□□□ -0.07
ERCC1-204ENST00000423698 FOXD4L3Q6VB84 417 aaPredicted RBP14.61□□□□□ -0.07
ERCC1-204ENST00000423698 IL16Q14005 1332 aa14.61□□□□□ -0.07
ERCC1-204ENST00000423698 TTC21BQ7Z4L5 1316 aa14.61□□□□□ -0.07
ERCC1-204ENST00000423698 PNPLA6Q8IY17 1366 aa14.61□□□□□ -0.07
ERCC1-204ENST00000423698 TSPYL4Q9UJ04 414 aa14.61□□□□□ -0.07
ERCC1-204ENST00000423698 EXOC6BQ9Y2D4 811 aa14.61□□□□□ -0.07
ERCC1-204ENST00000423698 NLRP6P59044 892 aa14.6□□□□□ -0.07
ERCC1-204ENST00000423698 FAM13BQ9NYF5 915 aa14.6□□□□□ -0.07
ERCC1-204ENST00000423698 FAM135BQ49AJ0 1406 aa14.6□□□□□ -0.07
ERCC1-204ENST00000423698 MTHFSDQ2M296 383 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms