RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 NOB1Q9ULX3 412 aaKnown RBP18.14■□□□□ 0.49
CHRD-204ENST00000420973 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
CHRD-204ENST00000420973 KCNA6P17658 529 aa18.13■□□□□ 0.49
CHRD-204ENST00000420973 MCM10Q7L590 875 aa18.13■□□□□ 0.49
CHRD-204ENST00000420973 ZFP91Q96JP5 570 aaPredicted RBP18.13■□□□□ 0.49
CHRD-204ENST00000420973 PPLO60437 1756 aa18.13■□□□□ 0.49
CHRD-204ENST00000420973 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
CHRD-204ENST00000420973 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
CHRD-204ENST00000420973 KRT24Q2M2I5 525 aa18.12■□□□□ 0.49
CHRD-204ENST00000420973 DNTTIP2Q5QJE6 756 aaKnown RBP18.12■□□□□ 0.49
CHRD-204ENST00000420973 ZKSCAN2Q63HK3 967 aa18.12■□□□□ 0.49
CHRD-204ENST00000420973 SMAP1Q8IYB5 467 aaPredicted RBP18.12■□□□□ 0.49
CHRD-204ENST00000420973 ABCC11Q96J66 1382 aa18.12■□□□□ 0.49
CHRD-204ENST00000420973 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
CHRD-204ENST00000420973 MYOM1P52179 1685 aa18.11■□□□□ 0.49
CHRD-204ENST00000420973 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
CHRD-204ENST00000420973 ALKQ9UM73 1620 aa18.11■□□□□ 0.49
CHRD-204ENST00000420973 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
CHRD-204ENST00000420973 ABTB2Q8N961 1025 aa18.11■□□□□ 0.49
CHRD-204ENST00000420973 CHMP4AQ9BY43 222 aa18.11■□□□□ 0.49
CHRD-204ENST00000420973 TMEM2Q9UHN6 1383 aa18.11■□□□□ 0.49
CHRD-204ENST00000420973 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
CHRD-204ENST00000420973 PPP4R3BQ5MIZ7 849 aa18.1■□□□□ 0.49
CHRD-204ENST00000420973 WDR63Q8IWG1 891 aa18.1■□□□□ 0.49
CHRD-204ENST00000420973 ZNF830Q96NB3 372 aaPredicted RBP18.1■□□□□ 0.49
CHRD-204ENST00000420973 MAP7D2Q96T17 732 aa18.1■□□□□ 0.49
CHRD-204ENST00000420973 ESCO1Q5FWF5 840 aa18.1■□□□□ 0.49
CHRD-204ENST00000420973 PREX1Q8TCU6 1659 aa18.1■□□□□ 0.49
CHRD-204ENST00000420973 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
CHRD-204ENST00000420973 PTPRMP28827 1452 aa18.09■□□□□ 0.49
CHRD-204ENST00000420973 R3HCC1Q9Y3T6 440 aaKnown RBP18.08■□□□□ 0.49
CHRD-204ENST00000420973 PCDHB15Q9Y5E8 787 aa18.08■□□□□ 0.49
CHRD-204ENST00000420973 FOXO3O43524 673 aa18.07■□□□□ 0.48
CHRD-204ENST00000420973 SPRYD3Q8NCJ5 442 aa18.07■□□□□ 0.48
CHRD-204ENST00000420973 FCHSD2O94868 740 aa18.06■□□□□ 0.48
CHRD-204ENST00000420973 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
CHRD-204ENST00000420973 TRIM27P14373 513 aa18.06■□□□□ 0.48
CHRD-204ENST00000420973 SLC4A10Q6U841 1118 aa18.06■□□□□ 0.48
CHRD-204ENST00000420973 TMEM57Q8N5G2 664 aa18.05■□□□□ 0.48
CHRD-204ENST00000420973 TMEM131LA2VDJ0 1609 aa18.05■□□□□ 0.48
CHRD-204ENST00000420973 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
CHRD-204ENST00000420973 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
CHRD-204ENST00000420973 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
CHRD-204ENST00000420973 PSME1Q06323 249 aa18.04■□□□□ 0.48
CHRD-204ENST00000420973 RTF1Q92541 710 aaKnown RBP18.04■□□□□ 0.48
CHRD-204ENST00000420973 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
CHRD-204ENST00000420973 NSD2O96028 1365 aa18.04■□□□□ 0.48
CHRD-204ENST00000420973 BRD2P25440 801 aaKnown RBP18.03■□□□□ 0.48
CHRD-204ENST00000420973 PLEKHF1Q96S99 279 aa18.03■□□□□ 0.48
CHRD-204ENST00000420973 KIAA1210Q9ULL0 1709 aa18.03■□□□□ 0.48
CHRD-204ENST00000420973 MSNP26038 577 aaKnown RBP18.03■□□□□ 0.48
CHRD-204ENST00000420973 EIF4A2Q14240 407 aaKnown RBP18.03■□□□□ 0.48
CHRD-204ENST00000420973 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
CHRD-204ENST00000420973 PDE3AQ14432 1141 aa18.02■□□□□ 0.48
CHRD-204ENST00000420973 HAP1P54257 671 aaPredicted RBP18.02■□□□□ 0.48
CHRD-204ENST00000420973 PUS7Q96PZ0 661 aaKnown RBP18.02■□□□□ 0.47
CHRD-204ENST00000420973 NGEFQ8N5V2 710 aa18.01■□□□□ 0.47
CHRD-204ENST00000420973 LNPKQ9C0E8 428 aa18.01■□□□□ 0.47
CHRD-204ENST00000420973 PDZRN3Q9UPQ7 1066 aa18.01■□□□□ 0.47
CHRD-204ENST00000420973 IFT172Q9UG01 1749 aa18.01■□□□□ 0.47
CHRD-204ENST00000420973 ZFYVE9O95405 1425 aa18.01■□□□□ 0.47
CHRD-204ENST00000420973 MRE11P49959 708 aa18.01■□□□□ 0.47
CHRD-204ENST00000420973 TWISTNBQ3B726 338 aaPredicted RBP18.01■□□□□ 0.47
CHRD-204ENST00000420973 TMEM51Q9NW97 253 aa18.01■□□□□ 0.47
CHRD-204ENST00000420973 ANKLE2Q86XL3 938 aa18■□□□□ 0.47
CHRD-204ENST00000420973 MBIPQ9NS73 344 aa18■□□□□ 0.47
CHRD-204ENST00000420973 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
CHRD-204ENST00000420973 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
CHRD-204ENST00000420973 IL13P35225 146 aa18■□□□□ 0.47
CHRD-204ENST00000420973 C8orf58Q8NAV2 365 aa18■□□□□ 0.47
CHRD-204ENST00000420973 RWDD1Q9H446 243 aaPredicted RBP18■□□□□ 0.47
CHRD-204ENST00000420973 INSRP06213 1382 aa17.99■□□□□ 0.47
CHRD-204ENST00000420973 BECN1Q14457 450 aa17.99■□□□□ 0.47
CHRD-204ENST00000420973 MVPQ14764 893 aaKnown RBP17.99■□□□□ 0.47
CHRD-204ENST00000420973 FAM161AQ3B820 660 aa17.99■□□□□ 0.47
CHRD-204ENST00000420973 NINLQ9Y2I6 1382 aa17.98■□□□□ 0.47
CHRD-204ENST00000420973 ZC3H13Q5T200 1668 aaKnown RBP17.98■□□□□ 0.47
CHRD-204ENST00000420973 IPO8O15397 1037 aaKnown RBP17.98■□□□□ 0.47
CHRD-204ENST00000420973 SECISBP2LQ93073 1101 aaKnown RBP17.98■□□□□ 0.47
CHRD-204ENST00000420973 ZBTB22O15209 634 aa17.97■□□□□ 0.47
CHRD-204ENST00000420973 ARHGEF40Q8TER5 1519 aa17.97■□□□□ 0.47
CHRD-204ENST00000420973 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
CHRD-204ENST00000420973 CGNQ9P2M7 1197 aaKnown RBP17.97■□□□□ 0.47
CHRD-204ENST00000420973 GNAI1P63096 354 aa17.96■□□□□ 0.47
CHRD-204ENST00000420973 DDX17Q92841 729 aaKnown RBP17.96■□□□□ 0.47
CHRD-204ENST00000420973 UQCRHLA0A096LP55 91 aa17.96■□□□□ 0.47
CHRD-204ENST00000420973 UQCRHP07919 91 aa17.96■□□□□ 0.47
CHRD-204ENST00000420973 HSPA2P54652 639 aa17.96■□□□□ 0.47
CHRD-204ENST00000420973 DMTNQ08495 405 aa17.96■□□□□ 0.47
CHRD-204ENST00000420973 GRPEL1Q9HAV7 217 aa17.96■□□□□ 0.47
CHRD-204ENST00000420973 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
CHRD-204ENST00000420973 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.96■□□□□ 0.47
CHRD-204ENST00000420973 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
CHRD-204ENST00000420973 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
CHRD-204ENST00000420973 TSPYL4Q9UJ04 414 aa17.95■□□□□ 0.46
CHRD-204ENST00000420973 ANKRD45Q5TZF3 282 aa17.95■□□□□ 0.46
CHRD-204ENST00000420973 PROSER2Q86WR7 435 aaPredicted RBP17.95■□□□□ 0.46
CHRD-204ENST00000420973 KDM2BQ8NHM5 1336 aa17.94■□□□□ 0.46
CHRD-204ENST00000420973 EIF2S2P20042 333 aaKnown RBP17.94■□□□□ 0.46
CHRD-204ENST00000420973 ORAI2Q96SN7 254 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms