RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 THSD7AQ9UPZ6 1657 aa6.7□□□□□ -1.34
CNGA1-203ENST00000420489 TULP4Q9NRJ4 1543 aa6.7□□□□□ -1.34
CNGA1-203ENST00000420489 MAP3K9P80192 1104 aa6.7□□□□□ -1.34
CNGA1-203ENST00000420489 LSM11P83369 360 aaKnown RBP eCLIP6.7□□□□□ -1.34
CNGA1-203ENST00000420489 ANO8Q9HCE9 1232 aaPredicted RBP6.7□□□□□ -1.34
CNGA1-203ENST00000420489 EIF2AK4Q9P2K8 1649 aaKnown RBP6.69□□□□□ -1.34
CNGA1-203ENST00000420489 FSTL1Q12841 308 aa6.69□□□□□ -1.34
CNGA1-203ENST00000420489 C19orf44Q9H6X5 657 aa6.69□□□□□ -1.34
CNGA1-203ENST00000420489 ATP10DQ9P241 1426 aa6.69□□□□□ -1.34
CNGA1-203ENST00000420489 KRT27Q7Z3Y8 459 aa6.69□□□□□ -1.34
CNGA1-203ENST00000420489 CLIP1P30622 1438 aa6.69□□□□□ -1.34
CNGA1-203ENST00000420489 QSER1Q2KHR3 1735 aa6.68□□□□□ -1.34
CNGA1-203ENST00000420489 CICQ96RK0 1608 aaPredicted RBP6.68□□□□□ -1.34
CNGA1-203ENST00000420489 MYT1LQ9UL68 1186 aa6.68□□□□□ -1.34
CNGA1-203ENST00000420489 ABCA3Q99758 1704 aa6.67□□□□□ -1.34
CNGA1-203ENST00000420489 TMEM2Q9UHN6 1383 aa6.67□□□□□ -1.34
CNGA1-203ENST00000420489 VPS72Q15906 364 aa6.67□□□□□ -1.34
CNGA1-203ENST00000420489 EHBP1L1Q8N3D4 1523 aa6.67□□□□□ -1.34
CNGA1-203ENST00000420489 EVI5O60447 810 aa6.67□□□□□ -1.34
CNGA1-203ENST00000420489 CAMK2BQ13554 666 aa6.67□□□□□ -1.34
CNGA1-203ENST00000420489 BRINP3Q76B58 766 aa6.67□□□□□ -1.34
CNGA1-203ENST00000420489 SLC4A5Q9BY07 1137 aa6.67□□□□□ -1.34
CNGA1-203ENST00000420489 MST1RQ04912 1400 aa6.66□□□□□ -1.34
CNGA1-203ENST00000420489 RBM46Q8TBY0 533 aaKnown RBP6.66□□□□□ -1.34
CNGA1-203ENST00000420489 RNF166Q96A37 237 aaPredicted RBP6.66□□□□□ -1.34
CNGA1-203ENST00000420489 STAC3Q96MF2 364 aa6.66□□□□□ -1.34
CNGA1-203ENST00000420489 TROQ12816 1431 aaPredicted RBP6.66□□□□□ -1.34
CNGA1-203ENST00000420489 DHX29Q7Z478 1369 aaKnown RBP6.66□□□□□ -1.34
CNGA1-203ENST00000420489 ANKRD13DQ6ZTN6 518 aa6.66□□□□□ -1.34
CNGA1-203ENST00000420489 AFAP1Q8N556 730 aa6.66□□□□□ -1.34
CNGA1-203ENST00000420489 UNC5CLQ8IV45 518 aa6.65□□□□□ -1.34
CNGA1-203ENST00000420489 WDR70Q9NW82 654 aa6.65□□□□□ -1.34
CNGA1-203ENST00000420489 SOS2Q07890 1332 aaPredicted RBP6.65□□□□□ -1.34
CNGA1-203ENST00000420489 SPDYE16A6NNV3 312 aaPredicted RBP6.65□□□□□ -1.35
CNGA1-203ENST00000420489 FAM161AQ3B820 660 aa6.65□□□□□ -1.35
CNGA1-203ENST00000420489 PRPF38BQ5VTL8 546 aaKnown RBP6.65□□□□□ -1.35
CNGA1-203ENST00000420489 FOSBP53539 338 aa6.64□□□□□ -1.35
CNGA1-203ENST00000420489 FBXW7Q969H0 707 aa6.64□□□□□ -1.35
CNGA1-203ENST00000420489 EPAS1Q99814 870 aa6.64□□□□□ -1.35
CNGA1-203ENST00000420489 PXDNLA1KZ92 1463 aa6.64□□□□□ -1.35
CNGA1-203ENST00000420489 RRBP1Q9P2E9 1410 aaKnown RBP6.64□□□□□ -1.35
CNGA1-203ENST00000420489 PAXIP1Q6ZW49 1069 aaPredicted RBP6.64□□□□□ -1.35
CNGA1-203ENST00000420489 BCL2L12Q9HB09 334 aa6.64□□□□□ -1.35
CNGA1-203ENST00000420489 PTPREP23469 700 aa6.63□□□□□ -1.35
CNGA1-203ENST00000420489 ZNF454Q8N9F8 522 aa6.63□□□□□ -1.35
CNGA1-203ENST00000420489 PLEKHG1Q9ULL1 1385 aa6.63□□□□□ -1.35
CNGA1-203ENST00000420489 ATF3P18847 181 aa6.63□□□□□ -1.35
CNGA1-203ENST00000420489 ZDHHC16Q969W1 377 aa6.63□□□□□ -1.35
CNGA1-203ENST00000420489 CDK11AQ9UQ88 783 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-203ENST00000420489 ADAMTS7Q9UKP4 1686 aa6.63□□□□□ -1.35
CNGA1-203ENST00000420489 CFAP44Q96MT7 982 aa6.63□□□□□ -1.35
CNGA1-203ENST00000420489 SYT17Q9BSW7 474 aa6.63□□□□□ -1.35
CNGA1-203ENST00000420489 GPBP1L1Q9HC44 474 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-203ENST00000420489 NRAPQ86VF7 1730 aa6.62□□□□□ -1.35
CNGA1-203ENST00000420489 TOMM70O94826 608 aa6.62□□□□□ -1.35
CNGA1-203ENST00000420489 PHF14O94880 888 aa6.62□□□□□ -1.35
CNGA1-203ENST00000420489 TYW1BQ6NUM6 668 aa6.62□□□□□ -1.35
CNGA1-203ENST00000420489 ADGRD1Q6QNK2 874 aa6.62□□□□□ -1.35
CNGA1-203ENST00000420489 TXNDC2Q86VQ3 553 aa6.62□□□□□ -1.35
CNGA1-203ENST00000420489 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
CNGA1-203ENST00000420489 ARIH1Q9Y4X5 557 aaPredicted RBP6.62□□□□□ -1.35
CNGA1-203ENST00000420489 PRAG1Q86YV5 1406 aa6.61□□□□□ -1.35
CNGA1-203ENST00000420489 SPAG9O60271 1321 aaKnown RBP6.61□□□□□ -1.35
CNGA1-203ENST00000420489 TRPM2O94759 1503 aa6.61□□□□□ -1.35
CNGA1-203ENST00000420489 PLCH1Q4KWH8 1693 aa6.61□□□□□ -1.35
CNGA1-203ENST00000420489 XRN1Q8IZH2 1706 aaKnown RBP6.61□□□□□ -1.35
CNGA1-203ENST00000420489 TBX22Q9Y458 520 aa6.6□□□□□ -1.35
CNGA1-203ENST00000420489 EN1Q05925 392 aaPredicted RBP6.59□□□□□ -1.35
CNGA1-203ENST00000420489 KCNK17Q96T54 332 aa6.59□□□□□ -1.35
CNGA1-203ENST00000420489 EMILIN3Q9NT22 766 aa6.59□□□□□ -1.35
CNGA1-203ENST00000420489 CDC42BPAQ5VT25 1732 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 PRXQ9BXM0 1461 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 HSPA1AP0DMV8 641 aaKnown RBP6.58□□□□□ -1.36
CNGA1-203ENST00000420489 HSPA1BP0DMV9 641 aaKnown RBP6.58□□□□□ -1.36
CNGA1-203ENST00000420489 HNRNPMP52272 730 aaKnown RBP eCLIP6.58□□□□□ -1.36
CNGA1-203ENST00000420489 E2F4Q16254 413 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 PIK3C2BO00750 1634 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 LTKP29376 864 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 POTEEQ6S8J3 1075 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 FAM196AQ6ZSG2 479 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 HCSTQ9UBK5 93 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 DHX57Q6P158 1386 aaKnown RBP6.58□□□□□ -1.36
CNGA1-203ENST00000420489 YTHDC2Q9H6S0 1430 aaKnown RBP6.58□□□□□ -1.36
CNGA1-203ENST00000420489 ADGRL2O95490 1459 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 ARHGEF5Q12774 1597 aa6.58□□□□□ -1.36
CNGA1-203ENST00000420489 NALCNQ8IZF0 1738 aa6.57□□□□□ -1.36
CNGA1-203ENST00000420489 MTFR1LQ9H019 292 aa6.57□□□□□ -1.36
CNGA1-203ENST00000420489 PPP1R3GB7ZBB8 358 aa6.56□□□□□ -1.36
CNGA1-203ENST00000420489 HRO43593 1189 aa6.56□□□□□ -1.36
CNGA1-203ENST00000420489 HDGFP51858 240 aaKnown RBP6.56□□□□□ -1.36
CNGA1-203ENST00000420489 AXIN2Q9Y2T1 843 aa6.56□□□□□ -1.36
CNGA1-203ENST00000420489 DMRTA1Q5VZB9 504 aa6.56□□□□□ -1.36
CNGA1-203ENST00000420489 EZH2Q15910 746 aaKnown RBP6.56□□□□□ -1.36
CNGA1-203ENST00000420489 ABHD8Q96I13 439 aa6.56□□□□□ -1.36
CNGA1-203ENST00000420489 NBPF3Q9H094 633 aa6.56□□□□□ -1.36
CNGA1-203ENST00000420489 VPS9D1Q9Y2B5 631 aa6.56□□□□□ -1.36
CNGA1-203ENST00000420489 BCL9O00512 1426 aa6.55□□□□□ -1.36
CNGA1-203ENST00000420489 BRD4O60885 1362 aaPredicted RBP6.55□□□□□ -1.36
CNGA1-203ENST00000420489 CTCFP49711 727 aaPredicted RBP6.55□□□□□ -1.36
CNGA1-203ENST00000420489 PSEN2P49810 448 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms