RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 POTEMA6NI47 508 aa10.41□□□□□ -0.74
HMGN1-205ENST00000419378 MS4A1P11836 297 aa10.41□□□□□ -0.74
HMGN1-205ENST00000419378 IDI1Q13907 227 aa10.41□□□□□ -0.74
HMGN1-205ENST00000419378 FBXO41Q8TF61 875 aa10.41□□□□□ -0.74
HMGN1-205ENST00000419378 DDRGK1Q96HY6 314 aa10.41□□□□□ -0.74
HMGN1-205ENST00000419378 GPCPD1Q9NPB8 672 aa10.41□□□□□ -0.74
HMGN1-205ENST00000419378 SLC52A1Q9NWF4 448 aa10.4□□□□□ -0.74
HMGN1-205ENST00000419378 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
HMGN1-205ENST00000419378 TMEM2Q9UHN6 1383 aa10.39□□□□□ -0.75
HMGN1-205ENST00000419378 ERBB3P21860 1342 aa10.39□□□□□ -0.75
HMGN1-205ENST00000419378 ST18O60284 1047 aa10.39□□□□□ -0.75
HMGN1-205ENST00000419378 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
HMGN1-205ENST00000419378 SPHKAPQ2M3C7 1700 aa10.38□□□□□ -0.75
HMGN1-205ENST00000419378 IQSEC2Q5JU85 1478 aa10.38□□□□□ -0.75
HMGN1-205ENST00000419378 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
HMGN1-205ENST00000419378 VARS2Q5ST30 1063 aaKnown RBP10.38□□□□□ -0.75
HMGN1-205ENST00000419378 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
HMGN1-205ENST00000419378 MYO5BQ9ULV0 1848 aa10.37□□□□□ -0.75
HMGN1-205ENST00000419378 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
HMGN1-205ENST00000419378 C3orf80F5H4A9 247 aa10.37□□□□□ -0.75
HMGN1-205ENST00000419378 LTKP29376 864 aa10.37□□□□□ -0.75
HMGN1-205ENST00000419378 PROX2Q3B8N5 592 aa10.37□□□□□ -0.75
HMGN1-205ENST00000419378 TXNDC2Q86VQ3 553 aa10.37□□□□□ -0.75
HMGN1-205ENST00000419378 SSTR3P32745 418 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-205ENST00000419378 NUDT18Q6ZVK8 323 aa10.36□□□□□ -0.75
HMGN1-205ENST00000419378 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
HMGN1-205ENST00000419378 TIMELESSQ9UNS1 1208 aa10.36□□□□□ -0.75
HMGN1-205ENST00000419378 EID1Q9Y6B2 187 aa10.36□□□□□ -0.75
HMGN1-205ENST00000419378 CPS1P31327 1500 aa10.36□□□□□ -0.75
HMGN1-205ENST00000419378 ZFYVE9O95405 1425 aa10.35□□□□□ -0.75
HMGN1-205ENST00000419378 TRPM2O94759 1503 aa10.35□□□□□ -0.75
HMGN1-205ENST00000419378 PSEN2P49810 448 aa10.35□□□□□ -0.75
HMGN1-205ENST00000419378 EMP3P54852 163 aa10.35□□□□□ -0.75
HMGN1-205ENST00000419378 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
HMGN1-205ENST00000419378 EYA1Q99502 592 aa10.35□□□□□ -0.75
HMGN1-205ENST00000419378 TATDN2Q93075 761 aa10.34□□□□□ -0.75
HMGN1-205ENST00000419378 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
HMGN1-205ENST00000419378 FAM217BQ9NTX9 383 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-205ENST00000419378 PNMA3Q9UL41 463 aa10.34□□□□□ -0.75
HMGN1-205ENST00000419378 STRCP1A6NGW2 1772 aa10.34□□□□□ -0.75
HMGN1-205ENST00000419378 RIMS2Q9UQ26 1411 aa10.33□□□□□ -0.76
HMGN1-205ENST00000419378 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
HMGN1-205ENST00000419378 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
HMGN1-205ENST00000419378 CLTCL1P53675 1640 aa10.33□□□□□ -0.76
HMGN1-205ENST00000419378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
HMGN1-205ENST00000419378 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
HMGN1-205ENST00000419378 FAM163AQ96GL9 167 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-205ENST00000419378 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
HMGN1-205ENST00000419378 AXIN2Q9Y2T1 843 aa10.32□□□□□ -0.76
HMGN1-205ENST00000419378 PLEKHG1Q9ULL1 1385 aa10.31□□□□□ -0.76
HMGN1-205ENST00000419378 SMAPO00193 183 aa10.31□□□□□ -0.76
HMGN1-205ENST00000419378 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
HMGN1-205ENST00000419378 SETD5Q9C0A6 1442 aa10.31□□□□□ -0.76
HMGN1-205ENST00000419378 LRRC7Q96NW7 1537 aa10.3□□□□□ -0.76
HMGN1-205ENST00000419378 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
HMGN1-205ENST00000419378 ONECUT3O60422 494 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-205ENST00000419378 BEGAINQ9BUH8 593 aa10.3□□□□□ -0.76
HMGN1-205ENST00000419378 KIAA1468Q9P260 1216 aa10.3□□□□□ -0.76
HMGN1-205ENST00000419378 PPP1R15AO75807 674 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-205ENST00000419378 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
HMGN1-205ENST00000419378 SLC26A8Q96RN1 970 aa10.29□□□□□ -0.76
HMGN1-205ENST00000419378 NWD1Q149M9 1564 aa10.29□□□□□ -0.76
HMGN1-205ENST00000419378 KIF1BO60333 1816 aa10.28□□□□□ -0.76
HMGN1-205ENST00000419378 RAB3GAP2Q9H2M9 1393 aa10.28□□□□□ -0.76
HMGN1-205ENST00000419378 DNAJB2P25686 324 aa10.28□□□□□ -0.76
HMGN1-205ENST00000419378 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
HMGN1-205ENST00000419378 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
HMGN1-205ENST00000419378 DIP2AQ14689 1571 aa10.27□□□□□ -0.76
HMGN1-205ENST00000419378 UBAP1LF5GYI3 381 aa10.27□□□□□ -0.77
HMGN1-205ENST00000419378 NUTM2DQ5VT03 806 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-205ENST00000419378 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
HMGN1-205ENST00000419378 NEXMIFQ5QGS0 1516 aa10.27□□□□□ -0.77
HMGN1-205ENST00000419378 ADAMTS13Q76LX8 1427 aa10.26□□□□□ -0.77
HMGN1-205ENST00000419378 NKTRP30414 1462 aaKnown RBP10.26□□□□□ -0.77
HMGN1-205ENST00000419378 PBX2P40425 430 aa10.26□□□□□ -0.77
HMGN1-205ENST00000419378 C14orf37Q86TY3 774 aa10.26□□□□□ -0.77
HMGN1-205ENST00000419378 MPHOSPH9Q99550 1183 aa10.26□□□□□ -0.77
HMGN1-205ENST00000419378 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
HMGN1-205ENST00000419378 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
HMGN1-205ENST00000419378 XIRP1Q702N8 1843 aaKnown RBP10.26□□□□□ -0.77
HMGN1-205ENST00000419378 ALKQ9UM73 1620 aa10.25□□□□□ -0.77
HMGN1-205ENST00000419378 NRXN3Q9Y4C0 1643 aa10.25□□□□□ -0.77
HMGN1-205ENST00000419378 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
HMGN1-205ENST00000419378 KCNA6P17658 529 aa10.25□□□□□ -0.77
HMGN1-205ENST00000419378 ZNF326Q5BKZ1 582 aaKnown RBP10.25□□□□□ -0.77
HMGN1-205ENST00000419378 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
HMGN1-205ENST00000419378 SETBP1Q9Y6X0 1596 aa10.25□□□□□ -0.77
HMGN1-205ENST00000419378 ACIN1Q9UKV3 1341 aaKnown RBP10.25□□□□□ -0.77
HMGN1-205ENST00000419378 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
HMGN1-205ENST00000419378 CHD2O14647 1828 aaKnown RBP10.24□□□□□ -0.77
HMGN1-205ENST00000419378 ERICH6Q7L0X2 663 aa10.24□□□□□ -0.77
HMGN1-205ENST00000419378 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
HMGN1-205ENST00000419378 SLC4A5Q9BY07 1137 aa10.24□□□□□ -0.77
HMGN1-205ENST00000419378 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
HMGN1-205ENST00000419378 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-205ENST00000419378 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
HMGN1-205ENST00000419378 TBX22Q9Y458 520 aa10.24□□□□□ -0.77
HMGN1-205ENST00000419378 DDX11L8A8MPP1 907 aa10.23□□□□□ -0.77
HMGN1-205ENST00000419378 SH3D19Q5HYK7 790 aa10.23□□□□□ -0.77
HMGN1-205ENST00000419378 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms