RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TTC24A2A3L6 582 aaPredicted RBP5.15□□□□□ -1.59
VPS41-206ENST00000418457 GIGYF1O75420 1035 aaPredicted RBP5.15□□□□□ -1.59
VPS41-206ENST00000418457 PRR20EP86478 221 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 PRR20CP86479 221 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 PRR20DP86480 221 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 PRR20BP86481 221 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 PRR20AP86496 221 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 RNF20Q5VTR2 975 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 RNF135Q8IUD6 432 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 CYP4X1Q8N118 509 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 SNIP1Q8TAD8 396 aaKnown RBP5.15□□□□□ -1.59
VPS41-206ENST00000418457 UCN2Q96RP3 112 aa5.15□□□□□ -1.59
VPS41-206ENST00000418457 ESPNB1AK53 854 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 ADH1CP00326 375 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 ALDH1A1P00352 501 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 SKIP12755 728 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 FSHRP23945 695 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 RAB15P59190 212 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 INTS6LQ5JSJ4 861 aaKnown RBP5.14□□□□□ -1.59
VPS41-206ENST00000418457 TRIM67Q6ZTA4 783 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 SEPT12Q8IYM1 358 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 ARID3AQ99856 593 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 WASF2Q9Y6W5 498 aa5.14□□□□□ -1.59
VPS41-206ENST00000418457 PIK3CDO00329 1044 aa5.13□□□□□ -1.59
VPS41-206ENST00000418457 GRM5P41594 1212 aa5.13□□□□□ -1.59
VPS41-206ENST00000418457 NR5A1Q13285 461 aa5.13□□□□□ -1.59
VPS41-206ENST00000418457 CCDC125Q86Z20 511 aa5.13□□□□□ -1.59
VPS41-206ENST00000418457 PHTF2Q8N3S3 785 aa5.13□□□□□ -1.59
VPS41-206ENST00000418457 NFATC2IPQ8NCF5 419 aa5.13□□□□□ -1.59
VPS41-206ENST00000418457 PPP1R12CQ9BZL4 782 aa5.13□□□□□ -1.59
VPS41-206ENST00000418457 PALM3A6NDB9 673 aaPredicted RBP5.12□□□□□ -1.59
VPS41-206ENST00000418457 J3QL48 77 aa5.12□□□□□ -1.59
VPS41-206ENST00000418457 ATP9BO43861 1147 aa5.12□□□□□ -1.59
VPS41-206ENST00000418457 DHX9Q08211 1270 aaKnown RBP5.12□□□□□ -1.59
VPS41-206ENST00000418457 MAP7D1Q3KQU3 841 aa5.12□□□□□ -1.59
VPS41-206ENST00000418457 TBC1D9Q6ZT07 1266 aa5.12□□□□□ -1.59
VPS41-206ENST00000418457 CCDC116Q8IYX3 515 aa5.12□□□□□ -1.59
VPS41-206ENST00000418457 PLPP7Q8NBV4 271 aa5.12□□□□□ -1.59
VPS41-206ENST00000418457 TOR4AQ9NXH8 423 aa5.12□□□□□ -1.59
VPS41-206ENST00000418457 TFIP11Q9UBB9 837 aaKnown RBP5.12□□□□□ -1.59
VPS41-206ENST00000418457 PDZRN3Q9UPQ7 1066 aa5.12□□□□□ -1.59
VPS41-206ENST00000418457 USP17L5A8MUK1 530 aa5.11□□□□□ -1.59
VPS41-206ENST00000418457 NNTQ13423 1086 aa5.11□□□□□ -1.59
VPS41-206ENST00000418457 TRIM52Q96A61 297 aa5.11□□□□□ -1.59
VPS41-206ENST00000418457 CCDC85AQ96PX6 553 aaPredicted RBP5.11□□□□□ -1.59
VPS41-206ENST00000418457 CHIC2Q9UKJ5 165 aa5.11□□□□□ -1.59
VPS41-206ENST00000418457 DOLKQ9UPQ8 538 aa5.11□□□□□ -1.59
VPS41-206ENST00000418457 PCDHB11Q9Y5F2 797 aa5.11□□□□□ -1.59
VPS41-206ENST00000418457 ERVH48-1M5A8F1 160 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 LZTS3O60299 673 aaPredicted RBP5.1□□□□□ -1.59
VPS41-206ENST00000418457 NR3C2P08235 984 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 SMPD1P17405 629 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 RFX1P22670 979 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 LMOD1P29536 600 aaPredicted RBP5.1□□□□□ -1.59
VPS41-206ENST00000418457 TSGA10IPQ3SY00 556 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 OXLD1Q5BKU9 147 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 CFAP70Q5T0N1 1121 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 PPP1R26Q5T8A7 1209 aaPredicted RBP5.1□□□□□ -1.59
VPS41-206ENST00000418457 TRAF7Q6Q0C0 670 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 MAFBQ9Y5Q3 323 aaPredicted RBP5.1□□□□□ -1.59
VPS41-206ENST00000418457 EMILIN1Q9Y6C2 1016 aa5.1□□□□□ -1.59
VPS41-206ENST00000418457 USP17L3A6NCW0 530 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 USP17L4A6NCW7 530 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 NCOA4Q13772 614 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 EML3Q32P44 896 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 USP17L2Q6R6M4 530 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 USP17L1Q7RTZ2 530 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 PLEKHM2Q8IWE5 1019 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 DEPDC4Q8N2C3 294 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 SIRT1Q96EB6 747 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 CDCA7Q9BWT1 371 aaPredicted RBP5.09□□□□□ -1.59
VPS41-206ENST00000418457 TMPRSS4Q9NRS4 437 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 PGPEP1Q9NXJ5 209 aa5.09□□□□□ -1.59
VPS41-206ENST00000418457 FAM187AA6NFU0 413 aa5.08□□□□□ -1.6
VPS41-206ENST00000418457 GFRA3O60609 400 aa5.08□□□□□ -1.6
VPS41-206ENST00000418457 MYT1Q01538 1121 aa5.08□□□□□ -1.6
VPS41-206ENST00000418457 USP4Q13107 963 aa5.08□□□□□ -1.6
VPS41-206ENST00000418457 ZNF784Q8NCA9 323 aaPredicted RBP5.08□□□□□ -1.6
VPS41-206ENST00000418457 ESF1Q9H501 851 aaKnown RBP5.08□□□□□ -1.6
VPS41-206ENST00000418457 NRG2O14511 850 aaPredicted RBP5.07□□□□□ -1.6
VPS41-206ENST00000418457 ZIC2O95409 532 aaPredicted RBP5.07□□□□□ -1.6
VPS41-206ENST00000418457 MYCP01106 439 aaPredicted RBP5.07□□□□□ -1.6
VPS41-206ENST00000418457 WDR4P57081 412 aaKnown RBP5.07□□□□□ -1.6
VPS41-206ENST00000418457 ERVK-9P63128 1117 aa5.07□□□□□ -1.6
VPS41-206ENST00000418457 CC2D2BQ6DHV5 1058 aa5.07□□□□□ -1.6
VPS41-206ENST00000418457 HPS1Q92902 700 aa5.07□□□□□ -1.6
VPS41-206ENST00000418457 ITPKCQ96DU7 683 aa5.07□□□□□ -1.6
VPS41-206ENST00000418457 VRTNQ9H8Y1 702 aa5.07□□□□□ -1.6
VPS41-206ENST00000418457 CYLDQ9NQC7 956 aa5.07□□□□□ -1.6
VPS41-206ENST00000418457 MKRN1Q9UHC7 482 aaKnown RBP5.07□□□□□ -1.6
VPS41-206ENST00000418457 NOD1Q9Y239 953 aa5.07□□□□□ -1.6
VPS41-206ENST00000418457 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.06□□□□□ -1.6
VPS41-206ENST00000418457 ATP5J2-PTCD1G3V325 749 aa5.06□□□□□ -1.6
VPS41-206ENST00000418457 PPP1R15AO75807 674 aaPredicted RBP5.06□□□□□ -1.6
VPS41-206ENST00000418457 TIMP2P16035 220 aa5.06□□□□□ -1.6
VPS41-206ENST00000418457 SCTRP47872 440 aa5.06□□□□□ -1.6
VPS41-206ENST00000418457 LAPTM4AQ15012 233 aa5.06□□□□□ -1.6
VPS41-206ENST00000418457 PKDCCQ504Y2 493 aa5.06□□□□□ -1.6
VPS41-206ENST00000418457 TRIM50Q86XT4 487 aa5.06□□□□□ -1.6
VPS41-206ENST00000418457 PBXIP1Q96AQ6 731 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms