RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 RIMS1Q86UR5 1692 aaKnown RBP5.83□□□□□ -1.48
APP-207ENST00000415997 WIPF1O43516 503 aa5.83□□□□□ -1.48
APP-207ENST00000415997 SSTR3P32745 418 aaPredicted RBP5.83□□□□□ -1.48
APP-207ENST00000415997 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
APP-207ENST00000415997 BAP1Q92560 729 aa5.83□□□□□ -1.48
APP-207ENST00000415997 UACAQ9BZF9 1416 aa5.82□□□□□ -1.48
APP-207ENST00000415997 TNIKQ9UKE5 1360 aa5.82□□□□□ -1.48
APP-207ENST00000415997 SIAH2O43255 324 aa5.82□□□□□ -1.48
APP-207ENST00000415997 CCNYL3P0C7X3 344 aa5.82□□□□□ -1.48
APP-207ENST00000415997 SH3BP2P78314 561 aa5.82□□□□□ -1.48
APP-207ENST00000415997 TTLL12Q14166 644 aaPredicted RBP5.82□□□□□ -1.48
APP-207ENST00000415997 WDR7Q9Y4E6 1490 aa5.82□□□□□ -1.48
APP-207ENST00000415997 CD109Q6YHK3 1445 aa5.82□□□□□ -1.48
APP-207ENST00000415997 CFAP43Q8NDM7 1665 aa5.82□□□□□ -1.48
APP-207ENST00000415997 TRIM46Q7Z4K8 759 aa5.81□□□□□ -1.48
APP-207ENST00000415997 SPIRE2Q8WWL2 714 aa5.81□□□□□ -1.48
APP-207ENST00000415997 UNC93B1Q9H1C4 597 aa5.81□□□□□ -1.48
APP-207ENST00000415997 WRNQ14191 1432 aaPredicted RBP eCLIP5.81□□□□□ -1.48
APP-207ENST00000415997 ZCCHC11Q5TAX3 1644 aaKnown RBP5.81□□□□□ -1.48
APP-207ENST00000415997 MOXD2PA6NHM9 499 aa5.8□□□□□ -1.48
APP-207ENST00000415997 CTHP32929 405 aa5.8□□□□□ -1.48
APP-207ENST00000415997 PRR7Q8TB68 274 aa5.8□□□□□ -1.48
APP-207ENST00000415997 NXF1Q9UBU9 619 aaKnown RBP5.8□□□□□ -1.48
APP-207ENST00000415997 TLL2Q9Y6L7 1015 aa5.8□□□□□ -1.48
APP-207ENST00000415997 FRMPD1Q5SYB0 1578 aa5.8□□□□□ -1.48
APP-207ENST00000415997 TTC37Q6PGP7 1564 aa5.8□□□□□ -1.48
APP-207ENST00000415997 GMPRP36959 345 aa5.79□□□□□ -1.48
APP-207ENST00000415997 EVA1BQ9NVM1 165 aa5.79□□□□□ -1.48
APP-207ENST00000415997 PREX1Q8TCU6 1659 aa5.79□□□□□ -1.48
APP-207ENST00000415997 KCNH2Q12809 1159 aa5.78□□□□□ -1.48
APP-207ENST00000415997 ARID5BQ14865 1188 aa5.78□□□□□ -1.48
APP-207ENST00000415997 PTPRNQ16849 979 aa5.78□□□□□ -1.48
APP-207ENST00000415997 VSIG10Q8N0Z9 540 aa5.78□□□□□ -1.48
APP-207ENST00000415997 ZFP42Q96MM3 310 aa5.78□□□□□ -1.48
APP-207ENST00000415997 RGS17Q9UGC6 210 aaPredicted RBP5.78□□□□□ -1.48
APP-207ENST00000415997 PHLDB1Q86UU1 1377 aa5.78□□□□□ -1.48
APP-207ENST00000415997 PLEKHG3A1L390 1219 aa5.77□□□□□ -1.49
APP-207ENST00000415997 HSPA1LP34931 641 aa5.77□□□□□ -1.49
APP-207ENST00000415997 NNTQ13423 1086 aa5.77□□□□□ -1.49
APP-207ENST00000415997 MTMR2Q13614 643 aa5.77□□□□□ -1.49
APP-207ENST00000415997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.77□□□□□ -1.49
APP-207ENST00000415997 IRF7Q92985 503 aa5.77□□□□□ -1.49
APP-207ENST00000415997 PURBQ96QR8 312 aaKnown RBP5.77□□□□□ -1.49
APP-207ENST00000415997 ARHGEF40Q8TER5 1519 aa5.77□□□□□ -1.49
APP-207ENST00000415997 FAM181BA6NEQ2 426 aa5.76□□□□□ -1.49
APP-207ENST00000415997 SOBPA7XYQ1 873 aa5.76□□□□□ -1.49
APP-207ENST00000415997 UBAP1LF5GYI3 381 aa5.76□□□□□ -1.49
APP-207ENST00000415997 WDR4P57081 412 aaKnown RBP5.76□□□□□ -1.49
APP-207ENST00000415997 SCARF1Q14162 830 aa5.76□□□□□ -1.49
APP-207ENST00000415997 ZNF511Q8NB15 262 aa5.76□□□□□ -1.49
APP-207ENST00000415997 BEGAINQ9BUH8 593 aa5.76□□□□□ -1.49
APP-207ENST00000415997 SIGLEC1Q9BZZ2 1709 aa5.76□□□□□ -1.49
APP-207ENST00000415997 DISP1Q96F81 1524 aa5.75□□□□□ -1.49
APP-207ENST00000415997 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
APP-207ENST00000415997 VARSP26640 1264 aaKnown RBP5.75□□□□□ -1.49
APP-207ENST00000415997 AGERQ15109 404 aa5.75□□□□□ -1.49
APP-207ENST00000415997 CSPP1Q1MSJ5 1256 aa5.75□□□□□ -1.49
APP-207ENST00000415997 GIGYF2Q6Y7W6 1299 aaKnown RBP5.75□□□□□ -1.49
APP-207ENST00000415997 ZSCAN1Q8NBB4 408 aa5.75□□□□□ -1.49
APP-207ENST00000415997 TSC1Q92574 1164 aa5.75□□□□□ -1.49
APP-207ENST00000415997 CARMIL2Q6F5E8 1435 aa5.74□□□□□ -1.49
APP-207ENST00000415997 C6orf118Q5T5N4 469 aa5.74□□□□□ -1.49
APP-207ENST00000415997 MRPL14Q6P1L8 145 aaKnown RBP5.74□□□□□ -1.49
APP-207ENST00000415997 FAM174AQ8TBP5 190 aa5.74□□□□□ -1.49
APP-207ENST00000415997 FOXJ1Q92949 421 aa5.74□□□□□ -1.49
APP-207ENST00000415997 TBC1D2Q9BYX2 928 aa5.74□□□□□ -1.49
APP-207ENST00000415997 PCDHB15Q9Y5E8 787 aa5.74□□□□□ -1.49
APP-207ENST00000415997 NCOA1Q15788 1441 aa5.74□□□□□ -1.49
APP-207ENST00000415997 ERBB4Q15303 1308 aa5.74□□□□□ -1.49
APP-207ENST00000415997 ARID4BQ4LE39 1312 aaPredicted RBP5.74□□□□□ -1.49
APP-207ENST00000415997 SPDYE5A6NIY4 337 aa5.73□□□□□ -1.49
APP-207ENST00000415997 H3BM21 787 aa5.73□□□□□ -1.49
APP-207ENST00000415997 BIVM-ERCC5R4GMW8 1640 aa5.73□□□□□ -1.49
APP-207ENST00000415997 ARHGEF12Q9NZN5 1544 aa5.73□□□□□ -1.49
APP-207ENST00000415997 POGZQ7Z3K3 1410 aa5.73□□□□□ -1.49
APP-207ENST00000415997 FANCAO15360 1455 aa5.72□□□□□ -1.49
APP-207ENST00000415997 NEO1Q92859 1461 aa5.72□□□□□ -1.49
APP-207ENST00000415997 ADH1CP00326 375 aa5.72□□□□□ -1.49
APP-207ENST00000415997 TIMP2P16035 220 aa5.72□□□□□ -1.49
APP-207ENST00000415997 BARGINQ6ZT62 677 aa5.72□□□□□ -1.49
APP-207ENST00000415997 MAP10Q9P2G4 905 aa5.72□□□□□ -1.49
APP-207ENST00000415997 UHRF1BP1Q6BDS2 1440 aa5.72□□□□□ -1.49
APP-207ENST00000415997 ALKQ9UM73 1620 aa5.71□□□□□ -1.5
APP-207ENST00000415997 CFAP99D6REC4 459 aa5.71□□□□□ -1.5
APP-207ENST00000415997 MAN1A2O60476 641 aa5.71□□□□□ -1.5
APP-207ENST00000415997 ZIC2O95409 532 aaPredicted RBP5.71□□□□□ -1.5
APP-207ENST00000415997 DESI1Q6ICB0 168 aa5.71□□□□□ -1.5
APP-207ENST00000415997 LYPD8Q6UX82 237 aa5.71□□□□□ -1.5
APP-207ENST00000415997 NPAS3Q8IXF0 933 aa5.71□□□□□ -1.5
APP-207ENST00000415997 CABLES1Q8TDN4 633 aa5.71□□□□□ -1.5
APP-207ENST00000415997 ZFAND3Q9H8U3 227 aa5.71□□□□□ -1.5
APP-207ENST00000415997 ZNF335Q9H4Z2 1342 aaPredicted RBP5.71□□□□□ -1.5
APP-207ENST00000415997 FER1L4A9Z1Z3 1794 aa5.7□□□□□ -1.5
APP-207ENST00000415997 NUTM2BA6NNL0 878 aaPredicted RBP5.7□□□□□ -1.5
APP-207ENST00000415997 NUTM2EB1AL46 878 aaPredicted RBP5.7□□□□□ -1.5
APP-207ENST00000415997 ZMYND10O75800 440 aa5.7□□□□□ -1.5
APP-207ENST00000415997 HRCP23327 699 aa5.7□□□□□ -1.5
APP-207ENST00000415997 NUTM2DQ5VT03 806 aaPredicted RBP5.7□□□□□ -1.5
APP-207ENST00000415997 RSBN1LQ6PCB5 846 aaPredicted RBP5.7□□□□□ -1.5
APP-207ENST00000415997 NUTM2AQ8IVF1 878 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms