RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
CPNE1-208ENST00000414711 ABTB2Q8N961 1025 aa23.51■■□□□ 1.35
CPNE1-208ENST00000414711 WNK3Q9BYP7 1800 aa23.51■■□□□ 1.35
CPNE1-208ENST00000414711 MARCH10Q8NA82 808 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-208ENST00000414711 TOPAZ1Q8N9V7 1692 aa23.49■■□□□ 1.35
CPNE1-208ENST00000414711 GOLGB1Q14789 3259 aaKnown RBP23.48■■□□□ 1.35
CPNE1-208ENST00000414711 PELP1Q8IZL8 1130 aaKnown RBP23.48■■□□□ 1.35
CPNE1-208ENST00000414711 MPHOSPH9Q99550 1183 aa23.48■■□□□ 1.35
CPNE1-208ENST00000414711 ACEP12821 1306 aa23.48■■□□□ 1.35
CPNE1-208ENST00000414711 GCP02774 474 aa23.47■■□□□ 1.35
CPNE1-208ENST00000414711 PAPPAQ13219 1627 aa23.47■■□□□ 1.35
CPNE1-208ENST00000414711 TOM1L2Q6ZVM7 507 aa23.45■■□□□ 1.34
CPNE1-208ENST00000414711 KLHL34Q8N239 644 aa23.45■■□□□ 1.34
CPNE1-208ENST00000414711 ZBTB7CA1YPR0 619 aa23.44■■□□□ 1.34
CPNE1-208ENST00000414711 NLRP13Q86W25 1043 aa23.43■■□□□ 1.34
CPNE1-208ENST00000414711 ARHGEF28Q8N1W1 1705 aaKnown RBP23.42■■□□□ 1.34
CPNE1-208ENST00000414711 CDCA7Q9BWT1 371 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-208ENST00000414711 HSPA6P17066 643 aa23.41■■□□□ 1.34
CPNE1-208ENST00000414711 ATP10DQ9P241 1426 aa23.4■■□□□ 1.34
CPNE1-208ENST00000414711 NHSQ6T4R5 1651 aa23.39■■□□□ 1.34
CPNE1-208ENST00000414711 WDR17Q8IZU2 1322 aa23.38■■□□□ 1.33
CPNE1-208ENST00000414711 PLEKHG3A1L390 1219 aa23.38■■□□□ 1.33
CPNE1-208ENST00000414711 CDK19Q9BWU1 502 aa23.38■■□□□ 1.33
CPNE1-208ENST00000414711 CCDC61Q9Y6R9 512 aa23.38■■□□□ 1.33
CPNE1-208ENST00000414711 ZNF827Q17R98 1081 aa23.37■■□□□ 1.33
CPNE1-208ENST00000414711 POLD1P28340 1107 aa23.36■■□□□ 1.33
CPNE1-208ENST00000414711 NLGN2Q8NFZ4 835 aa23.36■■□□□ 1.33
CPNE1-208ENST00000414711 SLIT3O75094 1523 aa23.36■■□□□ 1.33
CPNE1-208ENST00000414711 GRIN3BO60391 1043 aa23.34■■□□□ 1.33
CPNE1-208ENST00000414711 COL18A1P39060 1754 aa23.34■■□□□ 1.33
CPNE1-208ENST00000414711 TNS2Q63HR2 1409 aa23.33■■□□□ 1.33
CPNE1-208ENST00000414711 YBX3P16989 372 aaKnown RBP eCLIP23.33■■□□□ 1.332e-6■■■■□ 21.8
CPNE1-208ENST00000414711 GPBP1L1Q9HC44 474 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-208ENST00000414711 COL24A1Q17RW2 1714 aa23.33■■□□□ 1.32
CPNE1-208ENST00000414711 SLC16A10Q8TF71 515 aa23.32■■□□□ 1.32
CPNE1-208ENST00000414711 BRD4O60885 1362 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-208ENST00000414711 EXOC5O00471 708 aa23.3■■□□□ 1.32
CPNE1-208ENST00000414711 AXIN2Q9Y2T1 843 aa23.3■■□□□ 1.32
CPNE1-208ENST00000414711 QSER1Q2KHR3 1735 aa23.3■■□□□ 1.32
CPNE1-208ENST00000414711 CPSF1Q10570 1443 aaKnown RBP23.29■■□□□ 1.32
CPNE1-208ENST00000414711 CARD10Q9BWT7 1032 aa23.29■■□□□ 1.32
CPNE1-208ENST00000414711 PPIP5K1Q6PFW1 1433 aa23.28■■□□□ 1.32
CPNE1-208ENST00000414711 ACSBG1Q96GR2 724 aa23.28■■□□□ 1.32
CPNE1-208ENST00000414711 ABCC6O95255 1503 aa23.28■■□□□ 1.32
CPNE1-208ENST00000414711 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
CPNE1-208ENST00000414711 BTAF1O14981 1849 aa23.27■■□□□ 1.32
CPNE1-208ENST00000414711 NLRP6P59044 892 aa23.27■■□□□ 1.32
CPNE1-208ENST00000414711 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
CPNE1-208ENST00000414711 AKT1S1Q96B36 256 aa23.26■■□□□ 1.31
CPNE1-208ENST00000414711 LRRC4BQ9NT99 713 aa23.26■■□□□ 1.31
CPNE1-208ENST00000414711 KDM2AQ9Y2K7 1162 aa23.26■■□□□ 1.31
CPNE1-208ENST00000414711 ADCY9O60503 1353 aa23.26■■□□□ 1.31
CPNE1-208ENST00000414711 USP6P35125 1406 aa23.25■■□□□ 1.31
CPNE1-208ENST00000414711 PNPLA7Q6ZV29 1317 aa23.25■■□□□ 1.31
CPNE1-208ENST00000414711 ZNF526Q8TF50 670 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-208ENST00000414711 CCDC7Q96M83 1385 aa23.24■■□□□ 1.31
CPNE1-208ENST00000414711 PIK3C2AO00443 1686 aa23.22■■□□□ 1.31
CPNE1-208ENST00000414711 DCAF11Q8TEB1 546 aa23.22■■□□□ 1.31
CPNE1-208ENST00000414711 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
CPNE1-208ENST00000414711 TUBGCP6Q96RT7 1819 aa23.21■■□□□ 1.31
CPNE1-208ENST00000414711 ARHGEF25Q86VW2 580 aa23.19■■□□□ 1.3
CPNE1-208ENST00000414711 SRPK2P78362 688 aaKnown RBP23.18■■□□□ 1.3
CPNE1-208ENST00000414711 SLC27A3Q5K4L6 730 aa23.17■■□□□ 1.3
CPNE1-208ENST00000414711 TFCP2L1Q9NZI6 479 aa23.17■■□□□ 1.3
CPNE1-208ENST00000414711 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
CPNE1-208ENST00000414711 APLP1P51693 650 aa23.15■■□□□ 1.3
CPNE1-208ENST00000414711 STAC3Q96MF2 364 aa23.15■■□□□ 1.3
CPNE1-208ENST00000414711 SOX12O15370 315 aa23.13■■□□□ 1.29
CPNE1-208ENST00000414711 KCNH5Q8NCM2 988 aa23.13■■□□□ 1.29
CPNE1-208ENST00000414711 CABP2Q9NPB3 220 aa23.13■■□□□ 1.29
CPNE1-208ENST00000414711 KIF3CO14782 793 aa23.11■■□□□ 1.29
CPNE1-208ENST00000414711 CAPN15O75808 1086 aa23.11■■□□□ 1.29
CPNE1-208ENST00000414711 NFAT5O94916 1531 aa23.11■■□□□ 1.29
CPNE1-208ENST00000414711 DNAJC5GQ8N7S2 189 aa23.09■■□□□ 1.29
CPNE1-208ENST00000414711 CABP1Q9NZU7 370 aa23.09■■□□□ 1.29
CPNE1-208ENST00000414711 IL2RBP14784 551 aa23.08■■□□□ 1.29
CPNE1-208ENST00000414711 KCNQ4P56696 695 aa23.08■■□□□ 1.29
CPNE1-208ENST00000414711 KAT6BQ8WYB5 2073 aa23.08■■□□□ 1.29
CPNE1-208ENST00000414711 MSH5O43196 834 aa23.06■■□□□ 1.28
CPNE1-208ENST00000414711 COL13A1Q5TAT6 717 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-208ENST00000414711 CD2APQ9Y5K6 639 aa23.06■■□□□ 1.28
CPNE1-208ENST00000414711 MSL1Q68DK7 614 aa23.05■■□□□ 1.28
CPNE1-208ENST00000414711 NLRP2Q9NX02 1062 aa23.05■■□□□ 1.28
CPNE1-208ENST00000414711 ERBB3P21860 1342 aa23.05■■□□□ 1.28
CPNE1-208ENST00000414711 LY75O60449 1722 aa23.02■■□□□ 1.28
CPNE1-208ENST00000414711 KIAA1210Q9ULL0 1709 aa23.02■■□□□ 1.28
CPNE1-208ENST00000414711 COL23A1Q86Y22 540 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-208ENST00000414711 TTC21BQ7Z4L5 1316 aa23.02■■□□□ 1.28
CPNE1-208ENST00000414711 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-208ENST00000414711 PRELPP51888 382 aa23■■□□□ 1.27
CPNE1-208ENST00000414711 TNS4Q8IZW8 715 aa22.99■■□□□ 1.27
CPNE1-208ENST00000414711 WDR90Q96KV7 1748 aa22.99■■□□□ 1.27
CPNE1-208ENST00000414711 SYTL4Q96C24 671 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-208ENST00000414711 TTC21AQ8NDW8 1320 aa22.98■■□□□ 1.27
CPNE1-208ENST00000414711 DOT1LQ8TEK3 1739 aa22.97■■□□□ 1.27
CPNE1-208ENST00000414711 TOMM70O94826 608 aa22.97■■□□□ 1.27
CPNE1-208ENST00000414711 CCNL1Q9UK58 526 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-208ENST00000414711 WWC3Q9ULE0 1092 aa22.96■■□□□ 1.27
CPNE1-208ENST00000414711 IGSF1Q8N6C5 1336 aa22.96■■□□□ 1.27
CPNE1-208ENST00000414711 NSD2O96028 1365 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms