RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SCUBE2Q9NQ36 999 aa7.27□□□□□ -1.25
VPS41-205ENST00000414632 PLA2R1Q13018 1463 aa7.27□□□□□ -1.25
VPS41-205ENST00000414632 RPRD2Q5VT52 1461 aaKnown RBP7.27□□□□□ -1.25
VPS41-205ENST00000414632 KDM5AP29375 1690 aaKnown RBP7.27□□□□□ -1.25
VPS41-205ENST00000414632 IDI1Q13907 227 aa7.26□□□□□ -1.25
VPS41-205ENST00000414632 STRCP1A6NGW2 1772 aa7.25□□□□□ -1.25
VPS41-205ENST00000414632 PRSS12P56730 875 aa7.25□□□□□ -1.25
VPS41-205ENST00000414632 TRIM26Q12899 539 aaPredicted RBP7.25□□□□□ -1.25
VPS41-205ENST00000414632 THEMISQ8N1K5 641 aaPredicted RBP7.25□□□□□ -1.25
VPS41-205ENST00000414632 CCDC82Q8N4S0 544 aa7.25□□□□□ -1.25
VPS41-205ENST00000414632 OTUD5Q96G74 571 aa7.25□□□□□ -1.25
VPS41-205ENST00000414632 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS41-205ENST00000414632 TBC1D2Q9BYX2 928 aa7.25□□□□□ -1.25
VPS41-205ENST00000414632 ADAM33Q9BZ11 813 aa7.25□□□□□ -1.25
VPS41-205ENST00000414632 RBM27Q9P2N5 1060 aaKnown RBP7.25□□□□□ -1.25
VPS41-205ENST00000414632 PTPRTO14522 1441 aa7.25□□□□□ -1.25
VPS41-205ENST00000414632 SETD5Q9C0A6 1442 aa7.25□□□□□ -1.25
VPS41-205ENST00000414632 RAB3GAP2Q9H2M9 1393 aa7.24□□□□□ -1.25
VPS41-205ENST00000414632 SLIT1O75093 1534 aa7.24□□□□□ -1.25
VPS41-205ENST00000414632 TRPM2O94759 1503 aa7.24□□□□□ -1.25
VPS41-205ENST00000414632 RAD21O60216 631 aa7.24□□□□□ -1.25
VPS41-205ENST00000414632 RBM46Q8TBY0 533 aaKnown RBP7.24□□□□□ -1.25
VPS41-205ENST00000414632 NPHP4O75161 1426 aaPredicted RBP7.24□□□□□ -1.25
VPS41-205ENST00000414632 SCAF11Q99590 1463 aaKnown RBP7.24□□□□□ -1.25
VPS41-205ENST00000414632 ARHGAP23Q9P227 1491 aa7.24□□□□□ -1.25
VPS41-205ENST00000414632 LTBP4Q8N2S1 1624 aa7.23□□□□□ -1.25
VPS41-205ENST00000414632 NUDT7P0C024 238 aa7.23□□□□□ -1.25
VPS41-205ENST00000414632 LTKP29376 864 aa7.23□□□□□ -1.25
VPS41-205ENST00000414632 CLK2P49760 499 aaKnown RBP7.23□□□□□ -1.25
VPS41-205ENST00000414632 ARSIQ5FYB1 569 aa7.23□□□□□ -1.25
VPS41-205ENST00000414632 NUTM2DQ5VT03 806 aaPredicted RBP7.23□□□□□ -1.25
VPS41-205ENST00000414632 PROSER2Q86WR7 435 aaPredicted RBP7.23□□□□□ -1.25
VPS41-205ENST00000414632 ANKLE2Q86XL3 938 aa7.23□□□□□ -1.25
VPS41-205ENST00000414632 KHSRPQ92945 711 aaKnown RBP eCLIP7.23□□□□□ -1.252e-6■■□□□ 13.5
VPS41-205ENST00000414632 CDCA7LQ96GN5 454 aa7.23□□□□□ -1.25
VPS41-205ENST00000414632 POM121Q96HA1 1249 aa7.23□□□□□ -1.25
VPS41-205ENST00000414632 ZNF335Q9H4Z2 1342 aaPredicted RBP7.23□□□□□ -1.25
VPS41-205ENST00000414632 HRCP23327 699 aa7.22□□□□□ -1.25
VPS41-205ENST00000414632 DIXDC1Q155Q3 683 aa7.22□□□□□ -1.25
VPS41-205ENST00000414632 TXNDC2Q86VQ3 553 aa7.22□□□□□ -1.25
VPS41-205ENST00000414632 FNBP4Q8N3X1 1017 aaPredicted RBP7.22□□□□□ -1.25
VPS41-205ENST00000414632 TMEM2Q9UHN6 1383 aa7.21□□□□□ -1.25
VPS41-205ENST00000414632 RIMS2Q9UQ26 1411 aa7.21□□□□□ -1.25
VPS41-205ENST00000414632 SPDYE5A6NIY4 337 aa7.21□□□□□ -1.26
VPS41-205ENST00000414632 BANK1Q8NDB2 785 aa7.21□□□□□ -1.26
VPS41-205ENST00000414632 SLC52A1Q9NWF4 448 aa7.21□□□□□ -1.26
VPS41-205ENST00000414632 XIRP1Q702N8 1843 aaKnown RBP7.21□□□□□ -1.26
VPS41-205ENST00000414632 MED14O60244 1454 aa7.21□□□□□ -1.26
VPS41-205ENST00000414632 PPLO60437 1756 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 ZFYVE9O95405 1425 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.2□□□□□ -1.26
VPS41-205ENST00000414632 RCCD1A6NED2 376 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 RFC5P40937 340 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 DOK7Q18PE1 504 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 MPHOSPH9Q99550 1183 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 SNRKQ9NRH2 765 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 FAM198AQ9UFP1 575 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 LIMD1Q9UGP4 676 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 EID1Q9Y6B2 187 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 IFT172Q9UG01 1749 aa7.2□□□□□ -1.26
VPS41-205ENST00000414632 NEXMIFQ5QGS0 1516 aa7.19□□□□□ -1.26
VPS41-205ENST00000414632 PPP1R15AO75807 674 aaPredicted RBP7.19□□□□□ -1.26
VPS41-205ENST00000414632 HOXB3P14651 431 aaPredicted RBP7.19□□□□□ -1.26
VPS41-205ENST00000414632 TMEM259Q4ZIN3 620 aa7.19□□□□□ -1.26
VPS41-205ENST00000414632 ZNF326Q5BKZ1 582 aaKnown RBP7.19□□□□□ -1.26
VPS41-205ENST00000414632 RIC3Q7Z5B4 369 aa7.19□□□□□ -1.26
VPS41-205ENST00000414632 EYA1Q99502 592 aa7.19□□□□□ -1.26
VPS41-205ENST00000414632 CHD2O14647 1828 aaKnown RBP7.19□□□□□ -1.26
VPS41-205ENST00000414632 NRXN3Q9Y4C0 1643 aa7.19□□□□□ -1.26
VPS41-205ENST00000414632 PDIA4P13667 645 aaKnown RBP7.18□□□□□ -1.26
VPS41-205ENST00000414632 COL9A1P20849 921 aa7.18□□□□□ -1.26
VPS41-205ENST00000414632 GPR153Q6NV75 609 aa7.18□□□□□ -1.26
VPS41-205ENST00000414632 SPIRE2Q8WWL2 714 aa7.18□□□□□ -1.26
VPS41-205ENST00000414632 SLC26A8Q96RN1 970 aa7.18□□□□□ -1.26
VPS41-205ENST00000414632 COG6Q9Y2V7 657 aa7.18□□□□□ -1.26
VPS41-205ENST00000414632 RIMBP2O15034 1052 aa7.17□□□□□ -1.26
VPS41-205ENST00000414632 PPP2R2DQ66LE6 453 aa7.17□□□□□ -1.26
VPS41-205ENST00000414632 SERPINA10Q9UK55 444 aa7.17□□□□□ -1.26
VPS41-205ENST00000414632 CCDC144AA2RUR9 1427 aa7.17□□□□□ -1.26
VPS41-205ENST00000414632 CPS1P31327 1500 aa7.17□□□□□ -1.26
VPS41-205ENST00000414632 SETD1AO15047 1707 aaKnown RBP7.16□□□□□ -1.26
VPS41-205ENST00000414632 SPTLC1O15269 473 aa7.16□□□□□ -1.26
VPS41-205ENST00000414632 CD46P15529 392 aa7.16□□□□□ -1.26
VPS41-205ENST00000414632 NUTM1Q86Y26 1132 aa7.16□□□□□ -1.26
VPS41-205ENST00000414632 ZSWIM6Q9HCJ5 1215 aa7.16□□□□□ -1.26
VPS41-205ENST00000414632 LHX6Q9UPM6 363 aa7.16□□□□□ -1.26
VPS41-205ENST00000414632 PLEKHG1Q9ULL1 1385 aa7.16□□□□□ -1.26
VPS41-205ENST00000414632 DDX11L8A8MPP1 907 aa7.15□□□□□ -1.26
VPS41-205ENST00000414632 RGL3Q3MIN7 710 aa7.15□□□□□ -1.26
VPS41-205ENST00000414632 NUDT18Q6ZVK8 323 aa7.15□□□□□ -1.26
VPS41-205ENST00000414632 SULF1Q8IWU6 871 aa7.15□□□□□ -1.26
VPS41-205ENST00000414632 CCDC97Q96F63 343 aaPredicted RBP7.15□□□□□ -1.26
VPS41-205ENST00000414632 BCL2L12Q9HB09 334 aa7.15□□□□□ -1.26
VPS41-205ENST00000414632 TSKSQ9UJT2 592 aa7.15□□□□□ -1.26
VPS41-205ENST00000414632 ZNF330Q9Y3S2 320 aaPredicted RBP7.15□□□□□ -1.26
VPS41-205ENST00000414632 LRRC7Q96NW7 1537 aa7.15□□□□□ -1.27
VPS41-205ENST00000414632 DIP2AQ14689 1571 aa7.15□□□□□ -1.27
VPS41-205ENST00000414632 NWD1Q149M9 1564 aa7.15□□□□□ -1.27
VPS41-205ENST00000414632 C3orf80F5H4A9 247 aa7.14□□□□□ -1.27
VPS41-205ENST00000414632 CSPP1Q1MSJ5 1256 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms