RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 USP17L11C9JVI0 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L21D6R901 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L18D6R9N7 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 AGERQ15109 404 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 LINC01559Q495D7 138 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 PHTF2Q8N3S3 785 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 EML3Q32P44 896 aa8.25□□□□□ -1.09
HMGB3P31-201ENST00000413333 TSGA10IPQ3SY00 556 aa8.25□□□□□ -1.09
HMGB3P31-201ENST00000413333 CRTC2Q53ET0 693 aaPredicted RBP8.25□□□□□ -1.09
HMGB3P31-201ENST00000413333 SH3BP5LQ7L8J4 393 aa8.25□□□□□ -1.09
HMGB3P31-201ENST00000413333 BAP1Q92560 729 aa8.25□□□□□ -1.09
HMGB3P31-201ENST00000413333 IL21Q9HBE4 155 aa8.25□□□□□ -1.09
HMGB3P31-201ENST00000413333 MTMR7Q9Y216 660 aa8.25□□□□□ -1.09
HMGB3P31-201ENST00000413333 FAM196BA6NMK8 535 aa8.24□□□□□ -1.09
HMGB3P31-201ENST00000413333 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
HMGB3P31-201ENST00000413333 TJAP1Q5JTD0 557 aa8.24□□□□□ -1.09
HMGB3P31-201ENST00000413333 B4GALNT3Q6L9W6 998 aa8.24□□□□□ -1.09
HMGB3P31-201ENST00000413333 LZTS3O60299 673 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P31-201ENST00000413333 S1PR4O95977 384 aa8.23□□□□□ -1.09
HMGB3P31-201ENST00000413333 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
HMGB3P31-201ENST00000413333 NKX2-3Q8TAU0 364 aa8.23□□□□□ -1.09
HMGB3P31-201ENST00000413333 FAM200AQ8TCP9 573 aa8.23□□□□□ -1.09
HMGB3P31-201ENST00000413333 FOXJ1Q92949 421 aa8.23□□□□□ -1.09
HMGB3P31-201ENST00000413333 FCF1Q9Y324 198 aaKnown RBP8.23□□□□□ -1.09
HMGB3P31-201ENST00000413333 PTK7Q13308 1070 aa8.22□□□□□ -1.09
HMGB3P31-201ENST00000413333 MAP7D1Q3KQU3 841 aa8.22□□□□□ -1.09
HMGB3P31-201ENST00000413333 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
HMGB3P31-201ENST00000413333 OGFOD1Q8N543 542 aa8.22□□□□□ -1.09
HMGB3P31-201ENST00000413333 MYT1LQ9UL68 1186 aa8.22□□□□□ -1.09
HMGB3P31-201ENST00000413333 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
HMGB3P31-201ENST00000413333 GIGYF1O75420 1035 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P31-201ENST00000413333 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
HMGB3P31-201ENST00000413333 BPHLQ86WA6 291 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P31-201ENST00000413333 ANKMY2Q8IV38 441 aa8.21□□□□□ -1.1
HMGB3P31-201ENST00000413333 ZNF594Q96JF6 807 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P31-201ENST00000413333 DPYDQ12882 1025 aa8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 ERFEQ4G0M1 354 aa8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 FOXD4L5Q5VV16 416 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 SH3RF1Q7Z6J0 888 aa8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 ZNF511Q8NB15 262 aa8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 FOXD4L4Q8WXT5 416 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 CDCA7Q9BWT1 371 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 CHIC2Q9UKJ5 165 aa8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 NOD1Q9Y239 953 aa8.2□□□□□ -1.1
HMGB3P31-201ENST00000413333 CLDN10P78369 228 aa8.19□□□□□ -1.1
HMGB3P31-201ENST00000413333 TRIM50Q86XT4 487 aa8.19□□□□□ -1.1
HMGB3P31-201ENST00000413333 SLC10A4Q96EP9 437 aa8.19□□□□□ -1.1
HMGB3P31-201ENST00000413333 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
HMGB3P31-201ENST00000413333 ATP1A2P50993 1020 aa8.18□□□□□ -1.1
HMGB3P31-201ENST00000413333 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
HMGB3P31-201ENST00000413333 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P31-201ENST00000413333 PPEF1O14829 653 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P31-201ENST00000413333 CCDC27Q2M243 656 aa8.17□□□□□ -1.1
HMGB3P31-201ENST00000413333 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
HMGB3P31-201ENST00000413333 SND1Q7KZF4 910 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGB3P31-201ENST00000413333 SSFA2P28290 1259 aa8.16□□□□□ -1.1
HMGB3P31-201ENST00000413333 RAB15P59190 212 aa8.16□□□□□ -1.1
HMGB3P31-201ENST00000413333 SH3BP2P78314 561 aa8.16□□□□□ -1.1
HMGB3P31-201ENST00000413333 GTF2IP78347 998 aa8.16□□□□□ -1.1
HMGB3P31-201ENST00000413333 PHLDB3Q6NSJ2 640 aa8.16□□□□□ -1.1
HMGB3P31-201ENST00000413333 SLAIN2Q9P270 581 aa8.16□□□□□ -1.1
HMGB3P31-201ENST00000413333 RBM19Q9Y4C8 960 aaKnown RBP8.16□□□□□ -1.1
HMGB3P31-201ENST00000413333 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
HMGB3P31-201ENST00000413333 ZBTB24O43167 697 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 PSME1Q06323 249 aa8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 FAM69CQ0P6D2 419 aa8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 NBPF20Q3BBV1 942 aa8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 LARGE2Q8N3Y3 721 aa8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 CLP1Q92989 425 aaKnown RBP8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 KIAA1024Q9UPX6 916 aa8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 GNEQ9Y223 722 aaKnown RBP8.15□□□□□ -1.1
HMGB3P31-201ENST00000413333 ZBTB7BO15156 539 aaPredicted RBP8.14□□□□□ -1.11
HMGB3P31-201ENST00000413333 TXNDC2Q86VQ3 553 aa8.14□□□□□ -1.11
HMGB3P31-201ENST00000413333 ARID4AP29374 1257 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P31-201ENST00000413333 RBM25P49756 843 aaKnown RBP8.13□□□□□ -1.11
HMGB3P31-201ENST00000413333 CCDC102BQ68D86 513 aa8.13□□□□□ -1.11
HMGB3P31-201ENST00000413333 C1QTNF2Q9BXJ5 285 aa8.13□□□□□ -1.11
HMGB3P31-201ENST00000413333 SEC13P55735 322 aa8.12□□□□□ -1.11
HMGB3P31-201ENST00000413333 USP4Q13107 963 aa8.12□□□□□ -1.11
HMGB3P31-201ENST00000413333 SWI5Q1ZZU3 235 aa8.12□□□□□ -1.11
HMGB3P31-201ENST00000413333 SIX5Q8N196 739 aa8.12□□□□□ -1.11
HMGB3P31-201ENST00000413333 TPCN2Q8NHX9 752 aa8.12□□□□□ -1.11
HMGB3P31-201ENST00000413333 SIRT1Q96EB6 747 aa8.12□□□□□ -1.11
HMGB3P31-201ENST00000413333 CDV3Q9UKY7 258 aaKnown RBP8.12□□□□□ -1.11
HMGB3P31-201ENST00000413333 SFI1A8K8P3 1242 aa8.11□□□□□ -1.11
HMGB3P31-201ENST00000413333 ESPNB1AK53 854 aa8.11□□□□□ -1.11
HMGB3P31-201ENST00000413333 PRMT3O60678 531 aa8.11□□□□□ -1.11
HMGB3P31-201ENST00000413333 LGR5O75473 907 aa8.11□□□□□ -1.11
HMGB3P31-201ENST00000413333 SCNN1AP37088 669 aa8.11□□□□□ -1.11
HMGB3P31-201ENST00000413333 ZNF428Q96B54 188 aa8.11□□□□□ -1.11
HMGB3P31-201ENST00000413333 PRIMPOLQ96LW4 560 aa8.11□□□□□ -1.11
HMGB3P31-201ENST00000413333 DKK1O94907 266 aa8.1□□□□□ -1.11
HMGB3P31-201ENST00000413333 KCNC4Q03721 635 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms