RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 BPHLQ86WA6 291 aaPredicted RBP7.16□□□□□ -1.26
RNU2-28P-201ENST00000410457 ZNF516Q92618 1163 aa7.16□□□□□ -1.26
RNU2-28P-201ENST00000410457 GZF1Q9H116 711 aaPredicted RBP7.16□□□□□ -1.26
RNU2-28P-201ENST00000410457 MKRN1Q9UHC7 482 aaKnown RBP7.16□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L15C9J2P7 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L10C9JJH3 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L13C9JLJ4 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L12C9JPN9 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L11C9JVI0 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L21D6R901 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L18D6R9N7 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L22D6RA61 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L17D6RBQ6 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L19D6RCP7 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L20D6RJB6 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 PTPN5P54829 565 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L24Q0WX57 530 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 TMCO4Q5TGY1 634 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 DZIP3Q86Y13 1208 aaKnown RBP7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 DEPDC4Q8N2C3 294 aa7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 NOVA2Q9UNW9 492 aaKnown RBP7.15□□□□□ -1.26
RNU2-28P-201ENST00000410457 CARNS1A5YM72 827 aa7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 PTK7Q13308 1070 aa7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 EML3Q32P44 896 aa7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 CRTC2Q53ET0 693 aaPredicted RBP7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 TMEM164Q5U3C3 297 aa7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 LARP1Q6PKG0 1096 aaKnown RBP7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 TRAF7Q6Q0C0 670 aa7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 ZNF511Q8NB15 262 aa7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 STK32AQ8WU08 396 aa7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 FCF1Q9Y324 198 aaKnown RBP7.14□□□□□ -1.27
RNU2-28P-201ENST00000410457 MAGEB6P1A0A0J9YX57 407 aa7.13□□□□□ -1.27
RNU2-28P-201ENST00000410457 S1PR4O95977 384 aa7.13□□□□□ -1.27
RNU2-28P-201ENST00000410457 RASA1P20936 1047 aa7.13□□□□□ -1.27
RNU2-28P-201ENST00000410457 ERFEQ4G0M1 354 aa7.13□□□□□ -1.27
RNU2-28P-201ENST00000410457 CCDC125Q86Z20 511 aa7.13□□□□□ -1.27
RNU2-28P-201ENST00000410457 BAP1Q92560 729 aa7.13□□□□□ -1.27
RNU2-28P-201ENST00000410457 C1QTNF2Q9BXJ5 285 aa7.13□□□□□ -1.27
RNU2-28P-201ENST00000410457 RNF20Q5VTR2 975 aa7.12□□□□□ -1.27
RNU2-28P-201ENST00000410457 TRIM50Q86XT4 487 aa7.12□□□□□ -1.27
RNU2-28P-201ENST00000410457 CARD14Q9BXL6 1004 aa7.12□□□□□ -1.27
RNU2-28P-201ENST00000410457 CDV3Q9UKY7 258 aaKnown RBP7.12□□□□□ -1.27
RNU2-28P-201ENST00000410457 GNEQ9Y223 722 aaKnown RBP7.12□□□□□ -1.27
RNU2-28P-201ENST00000410457 ATP1A2P50993 1020 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 AGERQ15109 404 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 NBPF20Q3BBV1 942 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 NPM2Q86SE8 214 aaKnown RBP7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 SEPT12Q8IYM1 358 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 NKX2-3Q8TAU0 364 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 FOXJ1Q92949 421 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 SLC10A4Q96EP9 437 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 CDCA7Q9BWT1 371 aaPredicted RBP7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 DOLKQ9UPQ8 538 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 NOD1Q9Y239 953 aa7.11□□□□□ -1.27
RNU2-28P-201ENST00000410457 RANGAP1P46060 587 aaPredicted RBP7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 MFAP1P55081 439 aaKnown RBP7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 SWI5Q1ZZU3 235 aa7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 ANKMY2Q8IV38 441 aa7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 OGFOD1Q8N543 542 aa7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 FAM200AQ8TCP9 573 aa7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 CCDC85AQ96PX6 553 aaPredicted RBP7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 IVNS1ABPQ9Y6Y0 642 aa7.1□□□□□ -1.27
RNU2-28P-201ENST00000410457 ESPNB1AK53 854 aa7.09□□□□□ -1.27
RNU2-28P-201ENST00000410457 GIGYF1O75420 1035 aaPredicted RBP7.09□□□□□ -1.27
RNU2-28P-201ENST00000410457 CLDN10P78369 228 aa7.09□□□□□ -1.27
RNU2-28P-201ENST00000410457 FAM69CQ0P6D2 419 aa7.09□□□□□ -1.27
RNU2-28P-201ENST00000410457 SIX5Q8N196 739 aa7.09□□□□□ -1.27
RNU2-28P-201ENST00000410457 LARGE2Q8N3Y3 721 aa7.09□□□□□ -1.27
RNU2-28P-201ENST00000410457 CLP1Q92989 425 aaKnown RBP7.09□□□□□ -1.27
RNU2-28P-201ENST00000410457 ITGBL1O95965 494 aaPredicted RBP7.08□□□□□ -1.28
RNU2-28P-201ENST00000410457 SH3BP2P78314 561 aa7.08□□□□□ -1.28
RNU2-28P-201ENST00000410457 TSGA10IPQ3SY00 556 aa7.08□□□□□ -1.28
RNU2-28P-201ENST00000410457 SND1Q7KZF4 910 aaKnown RBP eCLIP7.08□□□□□ -1.28
RNU2-28P-201ENST00000410457 RGS22Q8NE09 1264 aa7.08□□□□□ -1.28
RNU2-28P-201ENST00000410457 SIRT1Q96EB6 747 aa7.08□□□□□ -1.28
RNU2-28P-201ENST00000410457 DNAAF2Q9NVR5 837 aaKnown RBP7.08□□□□□ -1.28
RNU2-28P-201ENST00000410457 SSFA2P28290 1259 aa7.07□□□□□ -1.28
RNU2-28P-201ENST00000410457 KCNC4Q03721 635 aa7.07□□□□□ -1.28
RNU2-28P-201ENST00000410457 DPYDQ12882 1025 aa7.07□□□□□ -1.28
RNU2-28P-201ENST00000410457 PHLDB3Q6NSJ2 640 aa7.07□□□□□ -1.28
RNU2-28P-201ENST00000410457 LCE2BO14633 110 aa7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 ZBTB24O43167 697 aaPredicted RBP7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 DKK1O94907 266 aa7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 WNT7BP56706 349 aa7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 GTF2IP78347 998 aa7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 OXLD1Q5BKU9 147 aa7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 TXNDC2Q86VQ3 553 aa7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 ANKLE1Q8NAG6 615 aa7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 CCER1Q8TC90 406 aaPredicted RBP7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 ZNF594Q96JF6 807 aaPredicted RBP7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 MAP4K5Q9Y4K4 846 aa7.06□□□□□ -1.28
RNU2-28P-201ENST00000410457 VARSP26640 1264 aaKnown RBP7.05□□□□□ -1.28
RNU2-28P-201ENST00000410457 GGCXP38435 758 aa7.05□□□□□ -1.28
RNU2-28P-201ENST00000410457 TRIM32Q13049 653 aa7.05□□□□□ -1.28
RNU2-28P-201ENST00000410457 USP4Q13107 963 aa7.05□□□□□ -1.28
RNU2-28P-201ENST00000410457 RNF223E7ERA6 249 aa7.04□□□□□ -1.28
RNU2-28P-201ENST00000410457 ZBTB7BO15156 539 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms