RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 HDGFL2Q7Z4V5 671 aaPredicted RBP12.55□□□□□ -0.4
MSH2-202ENST00000406134 NME9Q86XW9 330 aa12.55□□□□□ -0.4
MSH2-202ENST00000406134 ADAMTS13Q76LX8 1427 aa12.55□□□□□ -0.4
MSH2-202ENST00000406134 NCOA3Q9Y6Q9 1424 aa12.55□□□□□ -0.4
MSH2-202ENST00000406134 FAM69CQ0P6D2 419 aa12.55□□□□□ -0.4
MSH2-202ENST00000406134 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
MSH2-202ENST00000406134 VAMP4O75379 141 aa12.54□□□□□ -0.4
MSH2-202ENST00000406134 DDX19BQ9UMR2 479 aa12.54□□□□□ -0.4
MSH2-202ENST00000406134 PPP6R1Q9UPN7 881 aa12.54□□□□□ -0.4
MSH2-202ENST00000406134 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
MSH2-202ENST00000406134 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
MSH2-202ENST00000406134 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
MSH2-202ENST00000406134 ITPRIPQ8IWB1 547 aa12.54□□□□□ -0.4
MSH2-202ENST00000406134 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
MSH2-202ENST00000406134 LRRC37A3O60309 1634 aa12.53□□□□□ -0.4
MSH2-202ENST00000406134 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
MSH2-202ENST00000406134 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
MSH2-202ENST00000406134 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
MSH2-202ENST00000406134 NUCB1Q02818 461 aa12.53□□□□□ -0.4
MSH2-202ENST00000406134 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
MSH2-202ENST00000406134 ZBTB7BO15156 539 aaPredicted RBP12.52□□□□□ -0.4
MSH2-202ENST00000406134 HMOX1P09601 288 aa12.52□□□□□ -0.4
MSH2-202ENST00000406134 BRPF3Q9ULD4 1205 aa12.52□□□□□ -0.4
MSH2-202ENST00000406134 ROBO2Q9HCK4 1378 aa12.52□□□□□ -0.4
MSH2-202ENST00000406134 ABCC4O15439 1325 aa12.52□□□□□ -0.4
MSH2-202ENST00000406134 PIK3C2AO00443 1686 aa12.52□□□□□ -0.4
MSH2-202ENST00000406134 USP54Q70EL1 1684 aa12.52□□□□□ -0.4
MSH2-202ENST00000406134 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.4
MSH2-202ENST00000406134 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
MSH2-202ENST00000406134 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
MSH2-202ENST00000406134 SSH2Q76I76 1423 aa12.51□□□□□ -0.41
MSH2-202ENST00000406134 DDIT3P35638 169 aa12.51□□□□□ -0.41
MSH2-202ENST00000406134 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
MSH2-202ENST00000406134 PTPRUQ92729 1446 aa12.5□□□□□ -0.41
MSH2-202ENST00000406134 KIF2CQ99661 725 aa12.5□□□□□ -0.41
MSH2-202ENST00000406134 XRN1Q8IZH2 1706 aaKnown RBP12.49□□□□□ -0.41
MSH2-202ENST00000406134 FAM83GA6ND36 823 aa12.49□□□□□ -0.41
MSH2-202ENST00000406134 TXNDC2Q86VQ3 553 aa12.49□□□□□ -0.41
MSH2-202ENST00000406134 SLKQ9H2G2 1235 aaPredicted RBP12.49□□□□□ -0.41
MSH2-202ENST00000406134 ATP10DQ9P241 1426 aa12.49□□□□□ -0.41
MSH2-202ENST00000406134 RRS1Q15050 365 aaKnown RBP12.49□□□□□ -0.41
MSH2-202ENST00000406134 C8orf58Q8NAV2 365 aa12.49□□□□□ -0.41
MSH2-202ENST00000406134 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
MSH2-202ENST00000406134 NUDT16Q96DE0 195 aaKnown RBP12.48□□□□□ -0.41
MSH2-202ENST00000406134 SIRT1Q96EB6 747 aa12.48□□□□□ -0.41
MSH2-202ENST00000406134 ARHGAP45Q92619 1136 aa12.47□□□□□ -0.41
MSH2-202ENST00000406134 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
MSH2-202ENST00000406134 TMEM2Q9UHN6 1383 aa12.47□□□□□ -0.41
MSH2-202ENST00000406134 AK9Q5TCS8 1911 aa12.47□□□□□ -0.41
MSH2-202ENST00000406134 ZNF428Q96B54 188 aa12.47□□□□□ -0.41
MSH2-202ENST00000406134 C1orf115Q9H7X2 142 aa12.47□□□□□ -0.41
MSH2-202ENST00000406134 NWD1Q149M9 1564 aa12.46□□□□□ -0.41
MSH2-202ENST00000406134 RBM25P49756 843 aaKnown RBP12.46□□□□□ -0.41
MSH2-202ENST00000406134 DAXXQ9UER7 740 aaPredicted RBP12.46□□□□□ -0.41
MSH2-202ENST00000406134 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.42
MSH2-202ENST00000406134 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.42
MSH2-202ENST00000406134 AEBP1Q8IUX7 1158 aa12.45□□□□□ -0.42
MSH2-202ENST00000406134 USP6P35125 1406 aa12.45□□□□□ -0.42
MSH2-202ENST00000406134 CRB1P82279 1406 aa12.45□□□□□ -0.42
MSH2-202ENST00000406134 USP31Q70CQ4 1352 aa12.45□□□□□ -0.42
MSH2-202ENST00000406134 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
MSH2-202ENST00000406134 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
MSH2-202ENST00000406134 CEP170BQ9Y4F5 1589 aaPredicted RBP12.45□□□□□ -0.42
MSH2-202ENST00000406134 MFAP1P55081 439 aaKnown RBP12.45□□□□□ -0.42
MSH2-202ENST00000406134 LNPKQ9C0E8 428 aa12.45□□□□□ -0.42
MSH2-202ENST00000406134 MLECQ14165 292 aa12.44□□□□□ -0.42
MSH2-202ENST00000406134 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
MSH2-202ENST00000406134 BECN1Q14457 450 aa12.44□□□□□ -0.42
MSH2-202ENST00000406134 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
MSH2-202ENST00000406134 SLIT1O75093 1534 aa12.44□□□□□ -0.42
MSH2-202ENST00000406134 TNRQ92752 1358 aa12.44□□□□□ -0.42
MSH2-202ENST00000406134 DIP2AQ14689 1571 aa12.43□□□□□ -0.42
MSH2-202ENST00000406134 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
MSH2-202ENST00000406134 CD2BP2O95400 341 aaKnown RBP12.43□□□□□ -0.42
MSH2-202ENST00000406134 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
MSH2-202ENST00000406134 KRT24Q2M2I5 525 aa12.43□□□□□ -0.42
MSH2-202ENST00000406134 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
MSH2-202ENST00000406134 ARHGAP23Q9P227 1491 aa12.43□□□□□ -0.42
MSH2-202ENST00000406134 GNAI1P63096 354 aa12.42□□□□□ -0.42
MSH2-202ENST00000406134 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
MSH2-202ENST00000406134 PLEKHG1Q9ULL1 1385 aa12.42□□□□□ -0.42
MSH2-202ENST00000406134 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
MSH2-202ENST00000406134 KIF24Q5T7B8 1368 aa12.42□□□□□ -0.42
MSH2-202ENST00000406134 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
MSH2-202ENST00000406134 EIF5BO60841 1220 aaKnown RBP12.42□□□□□ -0.42
MSH2-202ENST00000406134 GSPT1P15170 499 aaKnown RBP12.42□□□□□ -0.42
MSH2-202ENST00000406134 LTKP29376 864 aa12.42□□□□□ -0.42
MSH2-202ENST00000406134 LTN1O94822 1766 aa12.41□□□□□ -0.42
MSH2-202ENST00000406134 TTC21BQ7Z4L5 1316 aa12.41□□□□□ -0.42
MSH2-202ENST00000406134 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
MSH2-202ENST00000406134 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
MSH2-202ENST00000406134 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.41□□□□□ -0.42
MSH2-202ENST00000406134 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
MSH2-202ENST00000406134 COG3Q96JB2 828 aa12.4□□□□□ -0.42
MSH2-202ENST00000406134 RGPD2P0DJD1 1756 aa12.39□□□□□ -0.43
MSH2-202ENST00000406134 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
MSH2-202ENST00000406134 ACEP12821 1306 aa12.39□□□□□ -0.43
MSH2-202ENST00000406134 SNX21Q969T3 373 aa12.39□□□□□ -0.43
MSH2-202ENST00000406134 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
MSH2-202ENST00000406134 MSH6P52701 1360 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms