RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 SRPK2P78362 688 aaKnown RBP7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 SREK1Q8WXA9 508 aaKnown RBP7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 ZNF592Q92610 1267 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 VRTNQ9H8Y1 702 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 NPATQ14207 1427 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 ROCK1Q13464 1354 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 ZMYM3Q14202 1370 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 ANKRD30AQ9BXX3 1397 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 KIF15Q9NS87 1388 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 PRDM15P57071 1507 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 KIF3BO15066 747 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 SOX12O15370 315 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 ADGRD1Q6QNK2 874 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 ANKRD13AQ8IZ07 590 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 BANK1Q8NDB2 785 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 EMILIN3Q9NT22 766 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 AXIN2Q9Y2T1 843 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 PTPRKQ15262 1439 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 VWDEQ8N2E2 1590 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 CEP152O94986 1710 aa7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 ZNF142P52746 1687 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P7-201ENST00000400214 TCF3P15923 654 aa7.56□□□□□ -1.2
HMGB3P7-201ENST00000400214 FAM50AQ14320 339 aaKnown RBP7.56□□□□□ -1.2
HMGB3P7-201ENST00000400214 TAF7LQ5H9L4 462 aa7.56□□□□□ -1.2
HMGB3P7-201ENST00000400214 CFAP70Q5T0N1 1121 aa7.56□□□□□ -1.2
HMGB3P7-201ENST00000400214 GGT6Q6P531 493 aa7.56□□□□□ -1.2
HMGB3P7-201ENST00000400214 ESF1Q9H501 851 aaKnown RBP7.56□□□□□ -1.2
HMGB3P7-201ENST00000400214 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
HMGB3P7-201ENST00000400214 CAMSAP1Q5T5Y3 1602 aa7.56□□□□□ -1.2
HMGB3P7-201ENST00000400214 NUDT7P0C024 238 aa7.55□□□□□ -1.2
HMGB3P7-201ENST00000400214 ABL2P42684 1182 aa7.55□□□□□ -1.2
HMGB3P7-201ENST00000400214 HIC1Q14526 733 aa7.55□□□□□ -1.2
HMGB3P7-201ENST00000400214 WWC1Q8IX03 1113 aa7.55□□□□□ -1.2
HMGB3P7-201ENST00000400214 RRP7BPQ9NSQ0 103 aa7.55□□□□□ -1.2
HMGB3P7-201ENST00000400214 ABCC3O15438 1527 aa7.55□□□□□ -1.2
HMGB3P7-201ENST00000400214 PZPP20742 1482 aa7.55□□□□□ -1.2
HMGB3P7-201ENST00000400214 LMTK2Q8IWU2 1503 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 RGS20O76081 388 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 NCLP19338 710 aaKnown RBP7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 RFC5P40937 340 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 CEBPAP49715 358 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 PPP1R15BQ5SWA1 713 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 FBXO31Q5XUX0 539 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 PPARGC1BQ86YN6 1023 aaKnown RBP7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 MTMR14Q8NCE2 650 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 C8orf37Q96NL8 207 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 TMUB1Q9BVT8 246 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 CHIC2Q9UKJ5 165 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 LHX6Q9UPM6 363 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 UNC13BO14795 1591 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 GCC2Q8IWJ2 1684 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 STRCQ7RTU9 1775 aa7.54□□□□□ -1.2
HMGB3P7-201ENST00000400214 WASHC2CQ9Y4E1 1318 aa7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 ARHGAP31Q2M1Z3 1444 aa7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 ANKRD50Q9ULJ7 1429 aa7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 MYO3AQ8NEV4 1616 aa7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 GRXCR2A6NFK2 248 aa7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 TMEM88BA6NKF7 163 aa7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 ZNF16P17020 682 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 PSMD1Q99460 953 aa7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 GNEQ9Y223 722 aaKnown RBP7.53□□□□□ -1.2
HMGB3P7-201ENST00000400214 UHRF1BP1Q6BDS2 1440 aa7.52□□□□□ -1.2
HMGB3P7-201ENST00000400214 SPATA31D1Q6ZQQ2 1576 aa7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 ANKRD62A6NC57 917 aa7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 KIF3CO14782 793 aa7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 HRO43593 1189 aa7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 FCHSD2O94868 740 aa7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 TSR1Q2NL82 804 aaKnown RBP7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 CC2D2BQ6DHV5 1058 aa7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 DNAJC14Q6Y2X3 702 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 ADAMTS19Q8TE59 1207 aa7.52□□□□□ -1.21
HMGB3P7-201ENST00000400214 TET3O43151 1660 aa7.51□□□□□ -1.21
HMGB3P7-201ENST00000400214 TK2O00142 265 aa7.51□□□□□ -1.21
HMGB3P7-201ENST00000400214 SIRT1Q96EB6 747 aa7.51□□□□□ -1.21
HMGB3P7-201ENST00000400214 PPP1R1BQ9UD71 204 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P7-201ENST00000400214 IQGAP3Q86VI3 1631 aa7.51□□□□□ -1.21
HMGB3P7-201ENST00000400214 KDM5AP29375 1690 aaKnown RBP7.51□□□□□ -1.21
HMGB3P7-201ENST00000400214 CEP170BQ9Y4F5 1589 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 ARHGAP33O14559 1287 aa7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 HDGFL1Q5TGJ6 251 aa7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 TICAM2Q86XR7 235 aa7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 BEGAINQ9BUH8 593 aa7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 IRX2Q9BZI1 471 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 EFCAB6Q5THR3 1501 aa7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 ZC3H4Q9UPT8 1303 aaKnown RBP7.5□□□□□ -1.21
HMGB3P7-201ENST00000400214 A2ML1A8K2U0 1454 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 NLRP1Q9C000 1473 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 KANK1Q14678 1352 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 SLC34A2O95436 690 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 SSTR3P32745 418 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 IFFO2Q5TF58 517 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 MYSM1Q5VVJ2 828 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 TMED8Q6PL24 325 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 UBXN4Q92575 508 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 HIRIP3Q9BW71 556 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 TBC1D2BQ9UPU7 963 aa7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P7-201ENST00000400214 NAIPQ13075 1403 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms