RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 POLR3AO14802 1390 aaPredicted RBP11.78□□□□□ -0.52
BRCC3-205ENST00000399026 NUTM2BA6NNL0 878 aaPredicted RBP11.77□□□□□ -0.53
BRCC3-205ENST00000399026 NUTM2EB1AL46 878 aaPredicted RBP11.77□□□□□ -0.53
BRCC3-205ENST00000399026 KRT28Q7Z3Y7 464 aa11.77□□□□□ -0.53
BRCC3-205ENST00000399026 NUTM2AQ8IVF1 878 aaPredicted RBP11.77□□□□□ -0.53
BRCC3-205ENST00000399026 TESK2Q96S53 571 aa11.77□□□□□ -0.53
BRCC3-205ENST00000399026 ATAD2Q6PL18 1390 aa11.77□□□□□ -0.53
BRCC3-205ENST00000399026 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
BRCC3-205ENST00000399026 ACEP12821 1306 aa11.76□□□□□ -0.53
BRCC3-205ENST00000399026 SPATA31A6Q5VVP1 1343 aa11.76□□□□□ -0.53
BRCC3-205ENST00000399026 SPATA31A3Q5VYP0 1347 aa11.76□□□□□ -0.53
BRCC3-205ENST00000399026 SBNO1A3KN83 1393 aa11.76□□□□□ -0.53
BRCC3-205ENST00000399026 PSME1Q06323 249 aa11.75□□□□□ -0.53
BRCC3-205ENST00000399026 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
BRCC3-205ENST00000399026 CD163L1Q9NR16 1453 aa11.75□□□□□ -0.53
BRCC3-205ENST00000399026 MEX3CQ5U5Q3 659 aaKnown RBP11.74□□□□□ -0.53
BRCC3-205ENST00000399026 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
BRCC3-205ENST00000399026 CABP1Q9NZU7 370 aa11.74□□□□□ -0.53
BRCC3-205ENST00000399026 USP6P35125 1406 aa11.74□□□□□ -0.53
BRCC3-205ENST00000399026 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
BRCC3-205ENST00000399026 PLEKHG3A1L390 1219 aa11.73□□□□□ -0.53
BRCC3-205ENST00000399026 ARHGEF10O15013 1369 aa11.73□□□□□ -0.53
BRCC3-205ENST00000399026 ADAMTS2O95450 1211 aa11.72□□□□□ -0.53
BRCC3-205ENST00000399026 HSPA5P11021 654 aaKnown RBP11.72□□□□□ -0.53
BRCC3-205ENST00000399026 PSEN1P49768 467 aa11.72□□□□□ -0.53
BRCC3-205ENST00000399026 A0A1W2PP64 1363 aa11.71□□□□□ -0.53
BRCC3-205ENST00000399026 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
BRCC3-205ENST00000399026 NUTM2GQ5VZR2 741 aa11.71□□□□□ -0.53
BRCC3-205ENST00000399026 TMC1Q8TDI8 760 aa11.71□□□□□ -0.53
BRCC3-205ENST00000399026 CABLES1Q8TDN4 633 aa11.71□□□□□ -0.53
BRCC3-205ENST00000399026 CPSF1Q10570 1443 aaKnown RBP11.7□□□□□ -0.54
BRCC3-205ENST00000399026 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
BRCC3-205ENST00000399026 TMF1P82094 1093 aa11.7□□□□□ -0.54
BRCC3-205ENST00000399026 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
BRCC3-205ENST00000399026 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
BRCC3-205ENST00000399026 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
BRCC3-205ENST00000399026 KTN1Q86UP2 1357 aaKnown RBP11.69□□□□□ -0.54
BRCC3-205ENST00000399026 USP54Q70EL1 1684 aa11.69□□□□□ -0.54
BRCC3-205ENST00000399026 PLCG2P16885 1265 aa11.69□□□□□ -0.54
BRCC3-205ENST00000399026 PDAP1Q13442 181 aaKnown RBP11.69□□□□□ -0.54
BRCC3-205ENST00000399026 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
BRCC3-205ENST00000399026 KIF20BQ96Q89 1820 aa11.69□□□□□ -0.54
BRCC3-205ENST00000399026 HAP1P54257 671 aaPredicted RBP11.68□□□□□ -0.54
BRCC3-205ENST00000399026 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
BRCC3-205ENST00000399026 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
BRCC3-205ENST00000399026 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.68□□□□□ -0.54
BRCC3-205ENST00000399026 NINLQ9Y2I6 1382 aa11.67□□□□□ -0.54
BRCC3-205ENST00000399026 COL14A1Q05707 1796 aaKnown RBP11.67□□□□□ -0.54
BRCC3-205ENST00000399026 AFF2P51816 1311 aa11.67□□□□□ -0.54
BRCC3-205ENST00000399026 SLIT3O75094 1523 aa11.67□□□□□ -0.54
BRCC3-205ENST00000399026 OCEL1Q9H607 264 aa11.67□□□□□ -0.54
BRCC3-205ENST00000399026 RGS17Q9UGC6 210 aaPredicted RBP11.67□□□□□ -0.54
BRCC3-205ENST00000399026 NWD2Q9ULI1 1742 aa11.66□□□□□ -0.54
BRCC3-205ENST00000399026 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
BRCC3-205ENST00000399026 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
BRCC3-205ENST00000399026 EDC4Q6P2E9 1401 aaKnown RBP11.66□□□□□ -0.54
BRCC3-205ENST00000399026 ANKRD36BQ8N2N9 1353 aa11.66□□□□□ -0.54
BRCC3-205ENST00000399026 USP19O94966 1318 aa11.65□□□□□ -0.54
BRCC3-205ENST00000399026 TTC21BQ7Z4L5 1316 aa11.65□□□□□ -0.54
BRCC3-205ENST00000399026 HDGFL2Q7Z4V5 671 aaPredicted RBP11.65□□□□□ -0.54
BRCC3-205ENST00000399026 ABTB2Q8N961 1025 aa11.65□□□□□ -0.54
BRCC3-205ENST00000399026 BRD4O60885 1362 aaPredicted RBP11.65□□□□□ -0.55
BRCC3-205ENST00000399026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.64□□□□□ -0.55
BRCC3-205ENST00000399026 PUS7Q96PZ0 661 aaKnown RBP11.64□□□□□ -0.55
BRCC3-205ENST00000399026 LMO7Q8WWI1 1683 aa11.64□□□□□ -0.55
BRCC3-205ENST00000399026 SLIT2O94813 1529 aa11.64□□□□□ -0.55
BRCC3-205ENST00000399026 NFAT5O94916 1531 aa11.64□□□□□ -0.55
BRCC3-205ENST00000399026 LTN1O94822 1766 aa11.64□□□□□ -0.55
BRCC3-205ENST00000399026 SLC24A1O60721 1099 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 POTEAQ6S8J7 498 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 ILDR2Q71H61 639 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 NME9Q86XW9 330 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 TERF2IPQ9NYB0 399 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 KIAA0232Q92628 1395 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
BRCC3-205ENST00000399026 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
BRCC3-205ENST00000399026 OVOS2A0A0J9YW53 1432 aa11.62□□□□□ -0.55
BRCC3-205ENST00000399026 OVOS2Q6IE36 1432 aa11.62□□□□□ -0.55
BRCC3-205ENST00000399026 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
BRCC3-205ENST00000399026 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
BRCC3-205ENST00000399026 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
BRCC3-205ENST00000399026 MKRN3Q13064 507 aaKnown RBP11.62□□□□□ -0.55
BRCC3-205ENST00000399026 ANKRD26Q9UPS8 1709 aa11.61□□□□□ -0.55
BRCC3-205ENST00000399026 SOX12O15370 315 aa11.61□□□□□ -0.55
BRCC3-205ENST00000399026 NLRP6P59044 892 aa11.61□□□□□ -0.55
BRCC3-205ENST00000399026 GLI3P10071 1580 aa11.61□□□□□ -0.55
BRCC3-205ENST00000399026 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
BRCC3-205ENST00000399026 ATRNO75882 1429 aa11.6□□□□□ -0.55
BRCC3-205ENST00000399026 RGPD5Q99666 1765 aa11.6□□□□□ -0.55
BRCC3-205ENST00000399026 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
BRCC3-205ENST00000399026 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
BRCC3-205ENST00000399026 CHRNA2Q15822 529 aa11.6□□□□□ -0.55
BRCC3-205ENST00000399026 ZNF772Q68DY9 489 aaPredicted RBP11.6□□□□□ -0.55
BRCC3-205ENST00000399026 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
BRCC3-205ENST00000399026 PRDM11Q9NQV5 511 aa11.6□□□□□ -0.55
BRCC3-205ENST00000399026 USP21Q9UK80 565 aa11.6□□□□□ -0.55
BRCC3-205ENST00000399026 COL18A1P39060 1754 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms