RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 IPO8O15397 1037 aaKnown RBP19.94■□□□□ 0.78
CHMP1A-201ENST00000397901 DDX11L8A8MPP1 907 aa19.94■□□□□ 0.78
CHMP1A-201ENST00000397901 TERF2IPQ9NYB0 399 aa19.94■□□□□ 0.78
CHMP1A-201ENST00000397901 MAP7D2Q96T17 732 aa19.93■□□□□ 0.78
CHMP1A-201ENST00000397901 NRXN3Q9Y4C0 1643 aa19.93■□□□□ 0.78
CHMP1A-201ENST00000397901 NUCB1Q02818 461 aa19.93■□□□□ 0.78
CHMP1A-201ENST00000397901 ANKRD26Q9UPS8 1709 aa19.91■□□□□ 0.78
CHMP1A-201ENST00000397901 TERF1P54274 439 aa19.91■□□□□ 0.78
CHMP1A-201ENST00000397901 ZNF692Q9BU19 519 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-201ENST00000397901 FBLN1P23142 703 aa19.91■□□□□ 0.78
CHMP1A-201ENST00000397901 CHD1LQ86WJ1 897 aa19.91■□□□□ 0.78
CHMP1A-201ENST00000397901 CDK19Q9BWU1 502 aa19.9■□□□□ 0.78
CHMP1A-201ENST00000397901 DNAJC5Q9H3Z4 198 aa19.9■□□□□ 0.78
CHMP1A-201ENST00000397901 C1orf115Q9H7X2 142 aa19.9■□□□□ 0.78
CHMP1A-201ENST00000397901 MED14O60244 1454 aa19.89■□□□□ 0.77
CHMP1A-201ENST00000397901 PRKAR2BP31323 418 aa19.88■□□□□ 0.77
CHMP1A-201ENST00000397901 RBM25P49756 843 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-201ENST00000397901 ALDH1L2Q3SY69 923 aa19.88■□□□□ 0.77
CHMP1A-201ENST00000397901 ESF1Q9H501 851 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-201ENST00000397901 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
CHMP1A-201ENST00000397901 HDGFL2Q7Z4V5 671 aaPredicted RBP19.87■□□□□ 0.77
CHMP1A-201ENST00000397901 THUMPD2Q9BTF0 503 aaKnown RBP19.87■□□□□ 0.77
CHMP1A-201ENST00000397901 OFD1O75665 1012 aa19.87■□□□□ 0.77
CHMP1A-201ENST00000397901 HSP90AB1P08238 724 aaKnown RBP19.86■□□□□ 0.77
CHMP1A-201ENST00000397901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHMP1A-201ENST00000397901 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHMP1A-201ENST00000397901 CABP1Q9NZU7 370 aa19.86■□□□□ 0.77
CHMP1A-201ENST00000397901 A0A0U1RQG5 324 aaPredicted RBP19.86■□□□□ 0.77
CHMP1A-201ENST00000397901 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.86■□□□□ 0.77
CHMP1A-201ENST00000397901 WAPLQ7Z5K2 1190 aa19.86■□□□□ 0.77
CHMP1A-201ENST00000397901 LRRC7Q96NW7 1537 aa19.85■□□□□ 0.77
CHMP1A-201ENST00000397901 HMOX1P09601 288 aa19.85■□□□□ 0.77
CHMP1A-201ENST00000397901 NCOA3Q9Y6Q9 1424 aa19.85■□□□□ 0.77
CHMP1A-201ENST00000397901 FCHSD2O94868 740 aa19.84■□□□□ 0.77
CHMP1A-201ENST00000397901 FOXD4L1Q9NU39 408 aa19.84■□□□□ 0.77
CHMP1A-201ENST00000397901 PNPLA6Q8IY17 1366 aa19.84■□□□□ 0.77
CHMP1A-201ENST00000397901 TNRQ92752 1358 aa19.84■□□□□ 0.77
CHMP1A-201ENST00000397901 ELL2O00472 640 aaPredicted RBP19.84■□□□□ 0.77
CHMP1A-201ENST00000397901 DDIT3P35638 169 aa19.84■□□□□ 0.77
CHMP1A-201ENST00000397901 SNX21Q969T3 373 aa19.84■□□□□ 0.77
CHMP1A-201ENST00000397901 KIF20BQ96Q89 1820 aa19.83■□□□□ 0.77
CHMP1A-201ENST00000397901 PPIP5K1Q6PFW1 1433 aa19.83■□□□□ 0.77
CHMP1A-201ENST00000397901 METP08581 1390 aa19.83■□□□□ 0.77
CHMP1A-201ENST00000397901 CCDC173Q0VFZ6 552 aa19.83■□□□□ 0.77
CHMP1A-201ENST00000397901 BMP2KLQ5H9B9 411 aa19.83■□□□□ 0.77
CHMP1A-201ENST00000397901 TNPO1Q92973 898 aaKnown RBP19.83■□□□□ 0.77
CHMP1A-201ENST00000397901 ZBTB7BO15156 539 aaPredicted RBP19.83■□□□□ 0.76
CHMP1A-201ENST00000397901 ZSCAN30Q86W11 494 aa19.83■□□□□ 0.76
CHMP1A-201ENST00000397901 PHACTR3Q96KR7 559 aa19.83■□□□□ 0.76
CHMP1A-201ENST00000397901 UBR1Q8IWV7 1749 aa19.83■□□□□ 0.76
CHMP1A-201ENST00000397901 SMAP1Q8IYB5 467 aaPredicted RBP19.82■□□□□ 0.76
CHMP1A-201ENST00000397901 TSPYL6Q8N831 410 aa19.82■□□□□ 0.76
CHMP1A-201ENST00000397901 KNDC1Q76NI1 1749 aa19.82■□□□□ 0.76
CHMP1A-201ENST00000397901 ATP7BP35670 1465 aa19.81■□□□□ 0.76
CHMP1A-201ENST00000397901 CD2BP2O95400 341 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-201ENST00000397901 MRPL50Q8N5N7 158 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-201ENST00000397901 PPP1R9BQ96SB3 815 aa19.81■□□□□ 0.76
CHMP1A-201ENST00000397901 KIF2CQ99661 725 aa19.81■□□□□ 0.76
CHMP1A-201ENST00000397901 VAMP4O75379 141 aa19.8■□□□□ 0.76
CHMP1A-201ENST00000397901 GAS2L3Q86XJ1 694 aa19.8■□□□□ 0.76
CHMP1A-201ENST00000397901 POLKQ9UBT6 870 aa19.8■□□□□ 0.76
CHMP1A-201ENST00000397901 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
CHMP1A-201ENST00000397901 SKOR2Q2VWA4 1001 aaPredicted RBP19.8■□□□□ 0.76
CHMP1A-201ENST00000397901 TECPR2O15040 1411 aa19.79■□□□□ 0.76
CHMP1A-201ENST00000397901 NFE2L2Q16236 605 aa19.79■□□□□ 0.76
CHMP1A-201ENST00000397901 TBC1D9Q6ZT07 1266 aa19.79■□□□□ 0.76
CHMP1A-201ENST00000397901 GCC1Q96CN9 775 aa19.79■□□□□ 0.76
CHMP1A-201ENST00000397901 FGD1P98174 961 aa19.79■□□□□ 0.76
CHMP1A-201ENST00000397901 RBM42Q9BTD8 480 aaKnown RBP19.79■□□□□ 0.76
CHMP1A-201ENST00000397901 PTMSP20962 102 aa19.78■□□□□ 0.76
CHMP1A-201ENST00000397901 MTERF4Q7Z6M4 381 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-201ENST00000397901 TMEM2Q9UHN6 1383 aa19.78■□□□□ 0.76
CHMP1A-201ENST00000397901 MSNP26038 577 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-201ENST00000397901 HDGFP51858 240 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-201ENST00000397901 SIRT2Q8IXJ6 389 aa19.78■□□□□ 0.76
CHMP1A-201ENST00000397901 BRPF1P55201 1214 aaPredicted RBP19.77■□□□□ 0.76
CHMP1A-201ENST00000397901 ZNF428Q96B54 188 aa19.77■□□□□ 0.76
CHMP1A-201ENST00000397901 CPS1P31327 1500 aa19.77■□□□□ 0.76
CHMP1A-201ENST00000397901 SIRT1Q96EB6 747 aa19.77■□□□□ 0.75
CHMP1A-201ENST00000397901 GBP4Q96PP9 640 aa19.77■□□□□ 0.75
CHMP1A-201ENST00000397901 CIZ1Q9ULV3 898 aaPredicted RBP19.77■□□□□ 0.75
CHMP1A-201ENST00000397901 WASLO00401 505 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-201ENST00000397901 RAB3GAP1Q15042 981 aa19.76■□□□□ 0.75
CHMP1A-201ENST00000397901 FAM13BQ9NYF5 915 aa19.76■□□□□ 0.75
CHMP1A-201ENST00000397901 EMILIN1Q9Y6C2 1016 aa19.76■□□□□ 0.75
CHMP1A-201ENST00000397901 MBIPQ9NS73 344 aa19.76■□□□□ 0.75
CHMP1A-201ENST00000397901 TXNDC2Q86VQ3 553 aa19.75■□□□□ 0.75
CHMP1A-201ENST00000397901 ANP32BQ92688 251 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-201ENST00000397901 CDC42BPGQ6DT37 1551 aa19.75■□□□□ 0.75
CHMP1A-201ENST00000397901 CPSF1Q10570 1443 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-201ENST00000397901 PTCH1Q13635 1447 aa19.75■□□□□ 0.75
CHMP1A-201ENST00000397901 CHMP4BQ9H444 224 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-201ENST00000397901 GNAI1P63096 354 aa19.74■□□□□ 0.75
CHMP1A-201ENST00000397901 ARHGAP45Q92619 1136 aa19.74■□□□□ 0.75
CHMP1A-201ENST00000397901 K7ELQ4 463 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-201ENST00000397901 PIK3R4Q99570 1358 aa19.73■□□□□ 0.75
CHMP1A-201ENST00000397901 TWISTNBQ3B726 338 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-201ENST00000397901 IFT57Q9NWB7 429 aa19.73■□□□□ 0.75
CHMP1A-201ENST00000397901 ABCC4O15439 1325 aa19.72■□□□□ 0.75
CHMP1A-201ENST00000397901 ADAMTS13Q76LX8 1427 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms