RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CLTCQ00610 1675 aaKnown RBP17.48■□□□□ 0.39
NUP98-204ENST00000397004 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
NUP98-204ENST00000397004 ALDH1L2Q3SY69 923 aa17.48■□□□□ 0.39
NUP98-204ENST00000397004 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
NUP98-204ENST00000397004 CLCN1P35523 988 aa17.47■□□□□ 0.39
NUP98-204ENST00000397004 BRPF1P55201 1214 aaPredicted RBP17.47■□□□□ 0.39
NUP98-204ENST00000397004 GAS2L2Q8NHY3 880 aa17.47■□□□□ 0.39
NUP98-204ENST00000397004 PIK3R4Q99570 1358 aa17.46■□□□□ 0.39
NUP98-204ENST00000397004 TMEM131LA2VDJ0 1609 aa17.46■□□□□ 0.39
NUP98-204ENST00000397004 GSPT1P15170 499 aaKnown RBP17.46■□□□□ 0.39
NUP98-204ENST00000397004 CDK19Q9BWU1 502 aa17.46■□□□□ 0.39
NUP98-204ENST00000397004 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
NUP98-204ENST00000397004 YTHDC2Q9H6S0 1430 aaKnown RBP17.46■□□□□ 0.39
NUP98-204ENST00000397004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
NUP98-204ENST00000397004 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
NUP98-204ENST00000397004 MRE11P49959 708 aa17.45■□□□□ 0.38
NUP98-204ENST00000397004 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
NUP98-204ENST00000397004 FCHSD2O94868 740 aa17.45■□□□□ 0.38
NUP98-204ENST00000397004 PTCH1Q13635 1447 aa17.45■□□□□ 0.38
NUP98-204ENST00000397004 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
NUP98-204ENST00000397004 MBIPQ9NS73 344 aa17.44■□□□□ 0.38
NUP98-204ENST00000397004 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
NUP98-204ENST00000397004 KIF20BQ96Q89 1820 aa17.44■□□□□ 0.38
NUP98-204ENST00000397004 IPO8O15397 1037 aaKnown RBP17.44■□□□□ 0.38
NUP98-204ENST00000397004 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
NUP98-204ENST00000397004 FBXO31Q5XUX0 539 aaPredicted RBP17.44■□□□□ 0.38
NUP98-204ENST00000397004 SSFA2P28290 1259 aa17.43■□□□□ 0.38
NUP98-204ENST00000397004 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
NUP98-204ENST00000397004 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
NUP98-204ENST00000397004 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
NUP98-204ENST00000397004 TERF2IPQ9NYB0 399 aa17.43■□□□□ 0.38
NUP98-204ENST00000397004 ABCC4O15439 1325 aa17.43■□□□□ 0.38
NUP98-204ENST00000397004 DDX11L8A8MPP1 907 aa17.42■□□□□ 0.38
NUP98-204ENST00000397004 WAPLQ7Z5K2 1190 aa17.42■□□□□ 0.38
NUP98-204ENST00000397004 OTUD7AQ8TE49 926 aaPredicted RBP17.41■□□□□ 0.38
NUP98-204ENST00000397004 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
NUP98-204ENST00000397004 PKP1Q13835 747 aa17.4■□□□□ 0.38
NUP98-204ENST00000397004 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
NUP98-204ENST00000397004 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
NUP98-204ENST00000397004 ALKQ9UM73 1620 aa17.4■□□□□ 0.38
NUP98-204ENST00000397004 HSP90AB1P08238 724 aaKnown RBP17.4■□□□□ 0.38
NUP98-204ENST00000397004 IL13P35225 146 aa17.4■□□□□ 0.38
NUP98-204ENST00000397004 NCKAP5LQ9HCH0 1330 aa17.4■□□□□ 0.38
NUP98-204ENST00000397004 K7ELQ4 463 aaPredicted RBP17.39■□□□□ 0.37
NUP98-204ENST00000397004 KRT24Q2M2I5 525 aa17.39■□□□□ 0.37
NUP98-204ENST00000397004 PLEKHM2Q8IWE5 1019 aa17.39■□□□□ 0.37
NUP98-204ENST00000397004 GCC1Q96CN9 775 aa17.39■□□□□ 0.37
NUP98-204ENST00000397004 ARHGAP45Q92619 1136 aa17.38■□□□□ 0.37
NUP98-204ENST00000397004 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
NUP98-204ENST00000397004 ESPNB1AK53 854 aa17.37■□□□□ 0.37
NUP98-204ENST00000397004 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
NUP98-204ENST00000397004 NME9Q86XW9 330 aa17.37■□□□□ 0.37
NUP98-204ENST00000397004 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
NUP98-204ENST00000397004 SLC52A1Q9NWF4 448 aa17.36■□□□□ 0.37
NUP98-204ENST00000397004 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
NUP98-204ENST00000397004 RGS12O14924 1447 aa17.36■□□□□ 0.37
NUP98-204ENST00000397004 TWISTNBQ3B726 338 aaPredicted RBP17.35■□□□□ 0.37
NUP98-204ENST00000397004 HDGFL2Q7Z4V5 671 aaPredicted RBP17.35■□□□□ 0.37
NUP98-204ENST00000397004 NAP1L5Q96NT1 182 aaPredicted RBP17.35■□□□□ 0.37
NUP98-204ENST00000397004 IFT57Q9NWB7 429 aa17.35■□□□□ 0.37
NUP98-204ENST00000397004 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
NUP98-204ENST00000397004 ATP10DQ9P241 1426 aa17.34■□□□□ 0.37
NUP98-204ENST00000397004 RRS1Q15050 365 aaKnown RBP17.34■□□□□ 0.37
NUP98-204ENST00000397004 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
NUP98-204ENST00000397004 BAG4O95429 457 aaKnown RBP17.33■□□□□ 0.37
NUP98-204ENST00000397004 ZNF428Q96B54 188 aa17.33■□□□□ 0.36
NUP98-204ENST00000397004 CPS1P31327 1500 aa17.32■□□□□ 0.36
NUP98-204ENST00000397004 DCTPP1Q9H773 170 aa17.32■□□□□ 0.36
NUP98-204ENST00000397004 CYP2E1P05181 493 aaPredicted RBP17.32■□□□□ 0.36
NUP98-204ENST00000397004 USP26Q9BXU7 913 aa17.32■□□□□ 0.36
NUP98-204ENST00000397004 CPSF1Q10570 1443 aaKnown RBP17.32■□□□□ 0.36
NUP98-204ENST00000397004 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
NUP98-204ENST00000397004 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
NUP98-204ENST00000397004 GBP4Q96PP9 640 aa17.31■□□□□ 0.36
NUP98-204ENST00000397004 SETD1AO15047 1707 aaKnown RBP17.31■□□□□ 0.36
NUP98-204ENST00000397004 CDC45O75419 566 aa17.3■□□□□ 0.36
NUP98-204ENST00000397004 GNAI1P63096 354 aa17.3■□□□□ 0.36
NUP98-204ENST00000397004 AEBP1Q8IUX7 1158 aa17.3■□□□□ 0.36
NUP98-204ENST00000397004 ZDHHC9Q9Y397 364 aa17.3■□□□□ 0.36
NUP98-204ENST00000397004 TTC22Q5TAA0 569 aa17.3■□□□□ 0.36
NUP98-204ENST00000397004 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
NUP98-204ENST00000397004 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
NUP98-204ENST00000397004 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
NUP98-204ENST00000397004 ATP7BP35670 1465 aa17.28■□□□□ 0.36
NUP98-204ENST00000397004 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
NUP98-204ENST00000397004 LMBRD1Q9NUN5 540 aa17.28■□□□□ 0.36
NUP98-204ENST00000397004 SDSP20132 328 aa17.27■□□□□ 0.36
NUP98-204ENST00000397004 CDK12Q9NYV4 1490 aaPredicted RBP17.27■□□□□ 0.36
NUP98-204ENST00000397004 KLHL40Q2TBA0 621 aa17.27■□□□□ 0.35
NUP98-204ENST00000397004 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.35
NUP98-204ENST00000397004 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
NUP98-204ENST00000397004 CEP85Q6P2H3 762 aa17.26■□□□□ 0.35
NUP98-204ENST00000397004 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
NUP98-204ENST00000397004 APBB1O00213 710 aa17.26■□□□□ 0.35
NUP98-204ENST00000397004 SKOR2Q2VWA4 1001 aaPredicted RBP17.26■□□□□ 0.35
NUP98-204ENST00000397004 MCTP1Q6DN14 999 aa17.25■□□□□ 0.35
NUP98-204ENST00000397004 MEIS3Q99687 375 aa17.25■□□□□ 0.35
NUP98-204ENST00000397004 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
NUP98-204ENST00000397004 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
NUP98-204ENST00000397004 GPT2Q8TD30 523 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms