RNA–Protein interactions for RNA: ENST00000394431.6

PSMD6-202, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best) BASIC

Gene PSMD6, Length 1,349 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-202ENST00000394431 HPS1Q92902 700 aa8.88□□□□□ -0.99
PSMD6-202ENST00000394431 REPIN1Q9BWE0 567 aaKnown RBP8.88□□□□□ -0.99
PSMD6-202ENST00000394431 TTC37Q6PGP7 1564 aa8.88□□□□□ -0.99
PSMD6-202ENST00000394431 UHRF1BP1Q6BDS2 1440 aa8.88□□□□□ -0.99
PSMD6-202ENST00000394431 MED1Q15648 1581 aaPredicted RBP8.87□□□□□ -0.99
PSMD6-202ENST00000394431 CLCN1P35523 988 aa8.87□□□□□ -0.99
PSMD6-202ENST00000394431 DENND4BO75064 1496 aaPredicted RBP8.87□□□□□ -0.99
PSMD6-202ENST00000394431 PREX1Q8TCU6 1659 aa8.86□□□□□ -0.99
PSMD6-202ENST00000394431 JUNDP17535 347 aa8.86□□□□□ -0.99
PSMD6-202ENST00000394431 ATP13A2Q9NQ11 1180 aa8.86□□□□□ -0.99
PSMD6-202ENST00000394431 ABCA9Q8IUA7 1624 aa8.86□□□□□ -0.99
PSMD6-202ENST00000394431 SUPT5HO00267 1087 aaKnown RBP8.85□□□□□ -0.99
PSMD6-202ENST00000394431 PTCRAQ6ISU1 281 aaPredicted RBP8.85□□□□□ -0.99
PSMD6-202ENST00000394431 WFS1O76024 890 aa8.84□□□□□ -0.99
PSMD6-202ENST00000394431 SNRPBP14678 240 aaKnown RBP8.84□□□□□ -0.99
PSMD6-202ENST00000394431 HSPA1LP34931 641 aa8.84□□□□□ -0.99
PSMD6-202ENST00000394431 FHOD3Q2V2M9 1422 aa8.84□□□□□ -0.99
PSMD6-202ENST00000394431 ATP10BO94823 1461 aa8.84□□□□□ -0.99
PSMD6-202ENST00000394431 FER1L4A9Z1Z3 1794 aa8.83□□□□□ -1
PSMD6-202ENST00000394431 ALDH1A1P00352 501 aa8.83□□□□□ -1
PSMD6-202ENST00000394431 FDX1P10109 184 aa8.83□□□□□ -1
PSMD6-202ENST00000394431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.83□□□□□ -1
PSMD6-202ENST00000394431 ZFYVE16Q7Z3T8 1539 aa8.83□□□□□ -1
PSMD6-202ENST00000394431 NUDT12Q9BQG2 462 aa8.83□□□□□ -1
PSMD6-202ENST00000394431 SIGLEC1Q9BZZ2 1709 aa8.83□□□□□ -1
PSMD6-202ENST00000394431 PCDHGC3Q9UN70 934 aa8.83□□□□□ -1
PSMD6-202ENST00000394431 ARHGEF12Q9NZN5 1544 aa8.83□□□□□ -1
PSMD6-202ENST00000394431 C6orf229H3BNL8 230 aa8.82□□□□□ -1
PSMD6-202ENST00000394431 WNT7BP56706 349 aa8.82□□□□□ -1
PSMD6-202ENST00000394431 RETREG3Q86VR2 466 aa8.82□□□□□ -1
PSMD6-202ENST00000394431 GOLGA3Q08378 1498 aa8.82□□□□□ -1
PSMD6-202ENST00000394431 RAPGEF2Q9Y4G8 1499 aa8.82□□□□□ -1
PSMD6-202ENST00000394431 ZNF335Q9H4Z2 1342 aaPredicted RBP8.82□□□□□ -1
PSMD6-202ENST00000394431 NDUFV2P19404 249 aa8.81□□□□□ -1
PSMD6-202ENST00000394431 SSTR3P32745 418 aaPredicted RBP8.81□□□□□ -1
PSMD6-202ENST00000394431 NFX1Q12986 1120 aaKnown RBP8.81□□□□□ -1
PSMD6-202ENST00000394431 EFCAB5A4FU69 1503 aa8.81□□□□□ -1
PSMD6-202ENST00000394431 ZMYM4Q5VZL5 1548 aa8.8□□□□□ -1
PSMD6-202ENST00000394431 NCOA1Q15788 1441 aa8.8□□□□□ -1
PSMD6-202ENST00000394431 PIP4K2BP78356 416 aa8.8□□□□□ -1
PSMD6-202ENST00000394431 SPIRE2Q8WWL2 714 aa8.8□□□□□ -1
PSMD6-202ENST00000394431 MAGI2Q86UL8 1455 aa8.79□□□□□ -1
PSMD6-202ENST00000394431 RICTORQ6R327 1708 aa8.79□□□□□ -1
PSMD6-202ENST00000394431 FAM9AQ8IZU1 332 aaPredicted RBP8.79□□□□□ -1
PSMD6-202ENST00000394431 EHBP1Q8NDI1 1231 aa8.79□□□□□ -1
PSMD6-202ENST00000394431 MOXD2PA6NHM9 499 aa8.78□□□□□ -1
PSMD6-202ENST00000394431 MS4A1P11836 297 aa8.78□□□□□ -1
PSMD6-202ENST00000394431 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
PSMD6-202ENST00000394431 TRIM47Q96LD4 638 aa8.78□□□□□ -1
PSMD6-202ENST00000394431 SENP2Q9HC62 589 aa8.78□□□□□ -1
PSMD6-202ENST00000394431 SIAH2O43255 324 aa8.77□□□□□ -1.01
PSMD6-202ENST00000394431 SH3BP2P78314 561 aa8.77□□□□□ -1.01
PSMD6-202ENST00000394431 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
PSMD6-202ENST00000394431 C9orf84Q5VXU9 1444 aa8.76□□□□□ -1.01
PSMD6-202ENST00000394431 ATP10AO60312 1499 aa8.76□□□□□ -1.01
PSMD6-202ENST00000394431 HECW1Q76N89 1606 aa8.76□□□□□ -1.01
PSMD6-202ENST00000394431 CCNYL3P0C7X3 344 aa8.76□□□□□ -1.01
PSMD6-202ENST00000394431 LCE2CQ5TA81 110 aa8.76□□□□□ -1.01
PSMD6-202ENST00000394431 WASF2Q9Y6W5 498 aa8.76□□□□□ -1.01
PSMD6-202ENST00000394431 TERTO14746 1132 aaKnown RBP8.75□□□□□ -1.01
PSMD6-202ENST00000394431 BMP1P13497 986 aa8.75□□□□□ -1.01
PSMD6-202ENST00000394431 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
PSMD6-202ENST00000394431 TRAPPC8Q9Y2L5 1435 aa8.74□□□□□ -1.01
PSMD6-202ENST00000394431 TOM1O60784 492 aa8.74□□□□□ -1.01
PSMD6-202ENST00000394431 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
PSMD6-202ENST00000394431 BAP1Q92560 729 aa8.74□□□□□ -1.01
PSMD6-202ENST00000394431 UNC93B1Q9H1C4 597 aa8.74□□□□□ -1.01
PSMD6-202ENST00000394431 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
PSMD6-202ENST00000394431 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
PSMD6-202ENST00000394431 EVA1BQ9NVM1 165 aa8.73□□□□□ -1.01
PSMD6-202ENST00000394431 CFAP74Q9C0B2 1584 aa8.72□□□□□ -1.01
PSMD6-202ENST00000394431 SCAPERQ9BY12 1400 aa8.72□□□□□ -1.01
PSMD6-202ENST00000394431 CAMSAP1Q5T5Y3 1602 aa8.72□□□□□ -1.01
PSMD6-202ENST00000394431 CAPN5O15484 640 aaPredicted RBP8.72□□□□□ -1.01
PSMD6-202ENST00000394431 ZMYND10O75800 440 aa8.72□□□□□ -1.01
PSMD6-202ENST00000394431 PTPRNQ16849 979 aa8.72□□□□□ -1.01
PSMD6-202ENST00000394431 TRIM46Q7Z4K8 759 aa8.72□□□□□ -1.01
PSMD6-202ENST00000394431 BEGAINQ9BUH8 593 aa8.72□□□□□ -1.01
PSMD6-202ENST00000394431 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
PSMD6-202ENST00000394431 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
PSMD6-202ENST00000394431 PLEKHD1A6NEE1 506 aa8.71□□□□□ -1.02
PSMD6-202ENST00000394431 KCNH2Q12809 1159 aa8.71□□□□□ -1.02
PSMD6-202ENST00000394431 MTMR2Q13614 643 aa8.71□□□□□ -1.02
PSMD6-202ENST00000394431 ZC3H15Q8WU90 426 aaKnown RBP8.71□□□□□ -1.02
PSMD6-202ENST00000394431 RGS17Q9UGC6 210 aaPredicted RBP8.71□□□□□ -1.02
PSMD6-202ENST00000394431 WIPF1O43516 503 aa8.7□□□□□ -1.02
PSMD6-202ENST00000394431 AMHR2Q16671 573 aa8.69□□□□□ -1.02
PSMD6-202ENST00000394431 CTTNBP2Q8WZ74 1663 aa8.69□□□□□ -1.02
PSMD6-202ENST00000394431 SETD1BQ9UPS6 1966 aaKnown RBP8.68□□□□□ -1.02
PSMD6-202ENST00000394431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.68□□□□□ -1.022e-6■■■□□ 16.1
PSMD6-202ENST00000394431 C3P01024 1663 aa8.68□□□□□ -1.02
PSMD6-202ENST00000394431 CTHP32929 405 aa8.68□□□□□ -1.02
PSMD6-202ENST00000394431 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
PSMD6-202ENST00000394431 PCDHB15Q9Y5E8 787 aa8.68□□□□□ -1.02
PSMD6-202ENST00000394431 NUP153P49790 1475 aaKnown RBP8.68□□□□□ -1.02
PSMD6-202ENST00000394431 VEGFBP49765 207 aa8.67□□□□□ -1.02
PSMD6-202ENST00000394431 INSM1Q01101 510 aaPredicted RBP8.67□□□□□ -1.02
PSMD6-202ENST00000394431 ZNF511Q8NB15 262 aa8.67□□□□□ -1.02
PSMD6-202ENST00000394431 RAPGEF6Q8TEU7 1601 aa8.67□□□□□ -1.02
PSMD6-202ENST00000394431 STK17AQ9UEE5 414 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms