RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 NAP1L5Q96NT1 182 aaPredicted RBP21.74■■□□□ 1.07
TRIM27-201ENST00000377194 NUTM2FA1L443 756 aa21.74■■□□□ 1.07
TRIM27-201ENST00000377194 ATF7IPQ6VMQ6 1270 aa21.73■■□□□ 1.07
TRIM27-201ENST00000377194 AATKQ6ZMQ8 1374 aa21.73■■□□□ 1.07
TRIM27-201ENST00000377194 USP19O94966 1318 aa21.73■■□□□ 1.07
TRIM27-201ENST00000377194 NFE2L2Q16236 605 aa21.72■■□□□ 1.07
TRIM27-201ENST00000377194 SLC26A8Q96RN1 970 aa21.72■■□□□ 1.07
TRIM27-201ENST00000377194 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
TRIM27-201ENST00000377194 SEC24BO95487 1268 aa21.71■■□□□ 1.07
TRIM27-201ENST00000377194 ZMYND15Q9H091 742 aa21.71■■□□□ 1.07
TRIM27-201ENST00000377194 MON2Q7Z3U7 1717 aa21.7■■□□□ 1.07
TRIM27-201ENST00000377194 CDK12Q9NYV4 1490 aaPredicted RBP21.7■■□□□ 1.07
TRIM27-201ENST00000377194 GLIPR1L2Q4G1C9 344 aa21.7■■□□□ 1.06
TRIM27-201ENST00000377194 ZNF692Q9BU19 519 aaPredicted RBP21.7■■□□□ 1.06
TRIM27-201ENST00000377194 RWDD1Q9H446 243 aaPredicted RBP21.7■■□□□ 1.06
TRIM27-201ENST00000377194 PLPPR3Q6T4P5 718 aa21.7■■□□□ 1.06
TRIM27-201ENST00000377194 ITPRIPQ8IWB1 547 aa21.69■■□□□ 1.06
TRIM27-201ENST00000377194 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
TRIM27-201ENST00000377194 TMEM57Q8N5G2 664 aa21.68■■□□□ 1.06
TRIM27-201ENST00000377194 C3P01024 1663 aa21.67■■□□□ 1.06
TRIM27-201ENST00000377194 PLEKHG1Q9ULL1 1385 aa21.67■■□□□ 1.06
TRIM27-201ENST00000377194 ACEP12821 1306 aa21.67■■□□□ 1.06
TRIM27-201ENST00000377194 AKAP12Q02952 1782 aa21.67■■□□□ 1.06
TRIM27-201ENST00000377194 PTPRUQ92729 1446 aa21.66■■□□□ 1.06
TRIM27-201ENST00000377194 TSPYL6Q8N831 410 aa21.66■■□□□ 1.06
TRIM27-201ENST00000377194 DDX19BQ9UMR2 479 aa21.66■■□□□ 1.06
TRIM27-201ENST00000377194 TTC21BQ7Z4L5 1316 aa21.65■■□□□ 1.06
TRIM27-201ENST00000377194 ALDH1L2Q3SY69 923 aa21.64■■□□□ 1.06
TRIM27-201ENST00000377194 L1TD1Q5T7N2 865 aaKnown RBP21.64■■□□□ 1.06
TRIM27-201ENST00000377194 FAM83GA6ND36 823 aa21.64■■□□□ 1.05
TRIM27-201ENST00000377194 VAMP4O75379 141 aa21.64■■□□□ 1.05
TRIM27-201ENST00000377194 PANK2Q9BZ23 570 aa21.64■■□□□ 1.05
TRIM27-201ENST00000377194 GZF1Q9H116 711 aaPredicted RBP21.64■■□□□ 1.05
TRIM27-201ENST00000377194 ELL2O00472 640 aaPredicted RBP21.63■■□□□ 1.05
TRIM27-201ENST00000377194 ITSN1Q15811 1721 aa21.63■■□□□ 1.05
TRIM27-201ENST00000377194 KIF16BQ96L93 1317 aa21.63■■□□□ 1.05
TRIM27-201ENST00000377194 MBIPQ9NS73 344 aa21.63■■□□□ 1.05
TRIM27-201ENST00000377194 PLEKHG3A1L390 1219 aa21.63■■□□□ 1.05
TRIM27-201ENST00000377194 ZNF853P0CG23 659 aa21.63■■□□□ 1.05
TRIM27-201ENST00000377194 ZBTB40Q9NUA8 1239 aa21.63■■□□□ 1.05
TRIM27-201ENST00000377194 BECN1Q14457 450 aa21.62■■□□□ 1.05
TRIM27-201ENST00000377194 AEBP1Q8IUX7 1158 aa21.62■■□□□ 1.05
TRIM27-201ENST00000377194 IPO8O15397 1037 aaKnown RBP21.62■■□□□ 1.05
TRIM27-201ENST00000377194 DCTN1Q14203 1278 aa21.62■■□□□ 1.05
TRIM27-201ENST00000377194 HSP90AA2PQ14568 343 aaPredicted RBP21.62■■□□□ 1.05
TRIM27-201ENST00000377194 VIRMAQ69YN4 1812 aaKnown RBP21.61■■□□□ 1.05
TRIM27-201ENST00000377194 XRCC6P12956 609 aaKnown RBP eCLIP21.61■■□□□ 1.052e-6■■■□□ 18.8
TRIM27-201ENST00000377194 IFT57Q9NWB7 429 aa21.61■■□□□ 1.05
TRIM27-201ENST00000377194 AMOTL2Q9Y2J4 779 aa21.61■■□□□ 1.05
TRIM27-201ENST00000377194 HDAC1Q13547 482 aaPredicted RBP21.61■■□□□ 1.05
TRIM27-201ENST00000377194 EIF4A2Q14240 407 aaKnown RBP21.61■■□□□ 1.05
TRIM27-201ENST00000377194 EID1Q9Y6B2 187 aa21.61■■□□□ 1.05
TRIM27-201ENST00000377194 GNAI1P63096 354 aa21.6■■□□□ 1.05
TRIM27-201ENST00000377194 SPRYD3Q8NCJ5 442 aa21.6■■□□□ 1.05
TRIM27-201ENST00000377194 BRPF1P55201 1214 aaPredicted RBP21.59■■□□□ 1.05
TRIM27-201ENST00000377194 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
TRIM27-201ENST00000377194 DLG5Q8TDM6 1919 aa21.58■■□□□ 1.05
TRIM27-201ENST00000377194 USP6P35125 1406 aa21.58■■□□□ 1.05
TRIM27-201ENST00000377194 HSP90AA1P07900 732 aaKnown RBP21.58■■□□□ 1.05
TRIM27-201ENST00000377194 MRPL50Q8N5N7 158 aaKnown RBP21.58■■□□□ 1.05
TRIM27-201ENST00000377194 HSP90AB2PQ58FF8 381 aa21.58■■□□□ 1.04
TRIM27-201ENST00000377194 SULT6B1Q6IMI4 303 aa21.58■■□□□ 1.04
TRIM27-201ENST00000377194 C8orf58Q8NAV2 365 aa21.58■■□□□ 1.04
TRIM27-201ENST00000377194 ZNF428Q96B54 188 aa21.58■■□□□ 1.04
TRIM27-201ENST00000377194 CFAP44Q96MT7 982 aa21.58■■□□□ 1.04
TRIM27-201ENST00000377194 OVOS2A0A0J9YW53 1432 aa21.57■■□□□ 1.04
TRIM27-201ENST00000377194 OVOS2Q6IE36 1432 aa21.57■■□□□ 1.04
TRIM27-201ENST00000377194 SOX12O15370 315 aa21.57■■□□□ 1.04
TRIM27-201ENST00000377194 NRKQ7Z2Y5 1582 aa21.57■■□□□ 1.04
TRIM27-201ENST00000377194 TOPAZ1Q8N9V7 1692 aa21.56■■□□□ 1.04
TRIM27-201ENST00000377194 ANTXR1Q9H6X2 564 aa21.56■■□□□ 1.04
TRIM27-201ENST00000377194 GOLGA6L3A6NEY3 463 aa21.55■■□□□ 1.04
TRIM27-201ENST00000377194 SMC5Q8IY18 1101 aa21.55■■□□□ 1.04
TRIM27-201ENST00000377194 TBX22Q9Y458 520 aa21.55■■□□□ 1.04
TRIM27-201ENST00000377194 TWISTNBQ3B726 338 aaPredicted RBP21.54■■□□□ 1.04
TRIM27-201ENST00000377194 ARHGAP23Q9P227 1491 aa21.54■■□□□ 1.04
TRIM27-201ENST00000377194 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
TRIM27-201ENST00000377194 SLIT1O75093 1534 aa21.53■■□□□ 1.04
TRIM27-201ENST00000377194 LMOD3Q0VAK6 560 aa21.53■■□□□ 1.04
TRIM27-201ENST00000377194 ZBTB7BO15156 539 aaPredicted RBP21.52■■□□□ 1.04
TRIM27-201ENST00000377194 CLCN1P35523 988 aa21.52■■□□□ 1.03
TRIM27-201ENST00000377194 PEAK1Q9H792 1746 aa21.51■■□□□ 1.03
TRIM27-201ENST00000377194 ARHGAP45Q92619 1136 aa21.51■■□□□ 1.03
TRIM27-201ENST00000377194 USP31Q70CQ4 1352 aa21.51■■□□□ 1.03
TRIM27-201ENST00000377194 THEMISQ8N1K5 641 aaPredicted RBP21.5■■□□□ 1.03
TRIM27-201ENST00000377194 TBC1D2Q9BYX2 928 aa21.5■■□□□ 1.03
TRIM27-201ENST00000377194 KRT24Q2M2I5 525 aa21.49■■□□□ 1.03
TRIM27-201ENST00000377194 MCM10Q7L590 875 aa21.49■■□□□ 1.03
TRIM27-201ENST00000377194 C1orf115Q9H7X2 142 aa21.49■■□□□ 1.03
TRIM27-201ENST00000377194 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
TRIM27-201ENST00000377194 RRP9O43818 475 aaKnown RBP21.49■■□□□ 1.03
TRIM27-201ENST00000377194 MAP3K19Q56UN5 1328 aa21.48■■□□□ 1.03
TRIM27-201ENST00000377194 PIK3R4Q99570 1358 aa21.48■■□□□ 1.03
TRIM27-201ENST00000377194 NGDNQ8NEJ9 315 aaKnown RBP21.47■■□□□ 1.03
TRIM27-201ENST00000377194 TBC1D32Q96NH3 1257 aa21.47■■□□□ 1.03
TRIM27-201ENST00000377194 UPF2Q9HAU5 1272 aaKnown RBP21.47■■□□□ 1.03
TRIM27-201ENST00000377194 NALCNQ8IZF0 1738 aa21.47■■□□□ 1.03
TRIM27-201ENST00000377194 RGPD8O14715 1765 aaPredicted RBP21.46■■□□□ 1.03
TRIM27-201ENST00000377194 FSD2A1L4K1 749 aa21.46■■□□□ 1.03
TRIM27-201ENST00000377194 ABCC4O15439 1325 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms