RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 FOSBP53539 338 aa20.19■□□□□ 0.82
VARS-215ENST00000375663 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
VARS-215ENST00000375663 PIK3C2GO75747 1445 aa20.19■□□□□ 0.82
VARS-215ENST00000375663 NOS1P29475 1434 aa20.19■□□□□ 0.82
VARS-215ENST00000375663 UQCRHLA0A096LP55 91 aa20.19■□□□□ 0.82
VARS-215ENST00000375663 UQCRHP07919 91 aa20.19■□□□□ 0.82
VARS-215ENST00000375663 UPF3BQ9BZI7 483 aaKnown RBP20.19■□□□□ 0.82
VARS-215ENST00000375663 AIMP1Q12904 312 aaKnown RBP20.18■□□□□ 0.82
VARS-215ENST00000375663 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
VARS-215ENST00000375663 FBXW7Q969H0 707 aa20.18■□□□□ 0.82
VARS-215ENST00000375663 FSD1Q9BTV5 496 aa20.18■□□□□ 0.82
VARS-215ENST00000375663 DNMT1P26358 1616 aaKnown RBP20.18■□□□□ 0.82
VARS-215ENST00000375663 SRCIN1Q9C0H9 1055 aa20.18■□□□□ 0.82
VARS-215ENST00000375663 COL17A1Q9UMD9 1497 aaPredicted RBP20.18■□□□□ 0.82
VARS-215ENST00000375663 POLR3AO14802 1390 aaPredicted RBP20.18■□□□□ 0.82
VARS-215ENST00000375663 NUCB1Q02818 461 aa20.18■□□□□ 0.82
VARS-215ENST00000375663 SPC24Q8NBT2 197 aa20.18■□□□□ 0.82
VARS-215ENST00000375663 CPLX1O14810 134 aa20.17■□□□□ 0.82
VARS-215ENST00000375663 BAG4O95429 457 aaKnown RBP20.17■□□□□ 0.82
VARS-215ENST00000375663 CARD14Q9BXL6 1004 aa20.17■□□□□ 0.82
VARS-215ENST00000375663 MAP4K4O95819 1239 aaPredicted RBP20.17■□□□□ 0.82
VARS-215ENST00000375663 NSD2O96028 1365 aa20.16■□□□□ 0.82
VARS-215ENST00000375663 CPLX2Q6PUV4 134 aaKnown RBP20.16■□□□□ 0.82
VARS-215ENST00000375663 EMILIN1Q9Y6C2 1016 aa20.16■□□□□ 0.82
VARS-215ENST00000375663 IL16Q14005 1332 aa20.16■□□□□ 0.82
VARS-215ENST00000375663 HOMER1Q86YM7 354 aa20.16■□□□□ 0.82
VARS-215ENST00000375663 PKNOX2Q96KN3 472 aa20.16■□□□□ 0.82
VARS-215ENST00000375663 CLCN1P35523 988 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 FAM69CQ0P6D2 419 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 MCM10Q7L590 875 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 CREBRFQ8IUR6 639 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 TTC5Q8N0Z6 440 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 BCL11BQ9C0K0 894 aaPredicted RBP20.15■□□□□ 0.82
VARS-215ENST00000375663 CCDC61Q9Y6R9 512 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 CCAR2Q8N163 923 aaKnown RBP20.15■□□□□ 0.82
VARS-215ENST00000375663 CYP46A1Q9Y6A2 500 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 TNNT3P45378 269 aaPredicted RBP20.15■□□□□ 0.82
VARS-215ENST00000375663 RIC3Q7Z5B4 369 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 MIS18AQ9NYP9 233 aa20.15■□□□□ 0.82
VARS-215ENST00000375663 WAPLQ7Z5K2 1190 aa20.14■□□□□ 0.82
VARS-215ENST00000375663 CCDC192P0DO97 292 aa20.14■□□□□ 0.81
VARS-215ENST00000375663 KLHL40Q2TBA0 621 aa20.14■□□□□ 0.81
VARS-215ENST00000375663 LRRFIP1Q32MZ4 808 aaKnown RBP20.14■□□□□ 0.81
VARS-215ENST00000375663 PSME1Q06323 249 aa20.13■□□□□ 0.81
VARS-215ENST00000375663 SDF4Q9BRK5 362 aa20.13■□□□□ 0.81
VARS-215ENST00000375663 SRGAP3O43295 1099 aa20.13■□□□□ 0.81
VARS-215ENST00000375663 NME9Q86XW9 330 aa20.12■□□□□ 0.81
VARS-215ENST00000375663 NUDT16Q96DE0 195 aaKnown RBP20.12■□□□□ 0.81
VARS-215ENST00000375663 MX1P20591 662 aa20.11■□□□□ 0.81
VARS-215ENST00000375663 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
VARS-215ENST00000375663 IDI1Q13907 227 aa20.11■□□□□ 0.81
VARS-215ENST00000375663 KRT85P78386 507 aa20.11■□□□□ 0.81
VARS-215ENST00000375663 TPD52L1Q16890 204 aaPredicted RBP20.11■□□□□ 0.81
VARS-215ENST00000375663 MAGI3Q5TCQ9 1506 aa20.11■□□□□ 0.81
VARS-215ENST00000375663 AEBP1Q8IUX7 1158 aa20.11■□□□□ 0.81
VARS-215ENST00000375663 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
VARS-215ENST00000375663 ZMYM4Q5VZL5 1548 aa20.11■□□□□ 0.81
VARS-215ENST00000375663 LARP1BQ659C4 914 aaKnown RBP20.1■□□□□ 0.81
VARS-215ENST00000375663 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
VARS-215ENST00000375663 SNX21Q969T3 373 aa20.1■□□□□ 0.81
VARS-215ENST00000375663 NEUROD6Q96NK8 337 aa20.1■□□□□ 0.81
VARS-215ENST00000375663 HIP1O00291 1037 aa20.1■□□□□ 0.81
VARS-215ENST00000375663 SMC5Q8IY18 1101 aa20.1■□□□□ 0.81
VARS-215ENST00000375663 ABTB2Q8N961 1025 aa20.1■□□□□ 0.81
VARS-215ENST00000375663 F6X3S4 739 aa20.09■□□□□ 0.81
VARS-215ENST00000375663 RBM42Q9BTD8 480 aaKnown RBP20.09■□□□□ 0.81
VARS-215ENST00000375663 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
VARS-215ENST00000375663 SYCP2Q9BX26 1530 aa20.09■□□□□ 0.81
VARS-215ENST00000375663 SHANK2Q9UPX8 1470 aa20.09■□□□□ 0.81
VARS-215ENST00000375663 ADGRL1O94910 1474 aa20.09■□□□□ 0.81
VARS-215ENST00000375663 RASSF8Q8NHQ8 419 aa20.09■□□□□ 0.81
VARS-215ENST00000375663 MBIPQ9NS73 344 aa20.09■□□□□ 0.81
VARS-215ENST00000375663 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
VARS-215ENST00000375663 ERC1Q8IUD2 1116 aa20.08■□□□□ 0.81
VARS-215ENST00000375663 SYNE3Q6ZMZ3 975 aa20.08■□□□□ 0.81
VARS-215ENST00000375663 NUTM1Q86Y26 1132 aa20.08■□□□□ 0.81
VARS-215ENST00000375663 INSRP06213 1382 aa20.08■□□□□ 0.81
VARS-215ENST00000375663 A2MP01023 1474 aa20.08■□□□□ 0.81
VARS-215ENST00000375663 KINO60870 393 aaKnown RBP20.08■□□□□ 0.8
VARS-215ENST00000375663 JAKMIP1Q96N16 626 aaKnown RBP20.08■□□□□ 0.8
VARS-215ENST00000375663 FBLN1P23142 703 aa20.08■□□□□ 0.8
VARS-215ENST00000375663 GOLGA6L1Q8N7Z2 621 aa20.08■□□□□ 0.8
VARS-215ENST00000375663 ARHGAP45Q92619 1136 aa20.08■□□□□ 0.8
VARS-215ENST00000375663 ADGRL2O95490 1459 aa20.08■□□□□ 0.8
VARS-215ENST00000375663 TTC22Q5TAA0 569 aa20.07■□□□□ 0.8
VARS-215ENST00000375663 TNMDQ9H2S6 317 aa20.07■□□□□ 0.8
VARS-215ENST00000375663 TRDNQ13061 729 aa20.07■□□□□ 0.8
VARS-215ENST00000375663 TRIM29Q14134 588 aa20.07■□□□□ 0.8
VARS-215ENST00000375663 DUOX2Q9NRD8 1548 aa20.07■□□□□ 0.8
VARS-215ENST00000375663 FYB1O15117 783 aa20.07■□□□□ 0.8
VARS-215ENST00000375663 APPP05067 770 aa20.07■□□□□ 0.8
VARS-215ENST00000375663 CEBPZQ03701 1054 aaKnown RBP20.07■□□□□ 0.8
VARS-215ENST00000375663 NAT10Q9H0A0 1025 aaKnown RBP20.07■□□□□ 0.8
VARS-215ENST00000375663 GCC2Q8IWJ2 1684 aa20.06■□□□□ 0.8
VARS-215ENST00000375663 STK3Q13188 491 aa20.06■□□□□ 0.8
VARS-215ENST00000375663 ANKRD36BQ8N2N9 1353 aa20.06■□□□□ 0.8
VARS-215ENST00000375663 EIF2AK4Q9P2K8 1649 aaKnown RBP20.06■□□□□ 0.8
VARS-215ENST00000375663 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
VARS-215ENST00000375663 PDRG1Q9NUG6 133 aa20.06■□□□□ 0.8
VARS-215ENST00000375663 ZBTB40Q9NUA8 1239 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms