RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
CSNK1E-202ENST00000366216 THRAP3Q9Y2W1 955 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-202ENST00000366216 PROM2Q8N271 834 aa15.95■□□□□ 0.14
CSNK1E-202ENST00000366216 SYT17Q9BSW7 474 aa15.95■□□□□ 0.14
CSNK1E-202ENST00000366216 FHDC1Q9C0D6 1143 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-202ENST00000366216 ATF5Q9Y2D1 282 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-202ENST00000366216 COL5A2P05997 1499 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-202ENST00000366216 GOLGB1Q14789 3259 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-202ENST00000366216 NUDT16Q96DE0 195 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-202ENST00000366216 BCL11BQ9C0K0 894 aaPredicted RBP15.94■□□□□ 0.14
CSNK1E-202ENST00000366216 CPDO75976 1380 aa15.94■□□□□ 0.14
CSNK1E-202ENST00000366216 COL18A1P39060 1754 aa15.92■□□□□ 0.14
CSNK1E-202ENST00000366216 CRB1P82279 1406 aa15.92■□□□□ 0.14
CSNK1E-202ENST00000366216 USP19O94966 1318 aa15.91■□□□□ 0.14
CSNK1E-202ENST00000366216 COL24A1Q17RW2 1714 aa15.91■□□□□ 0.14
CSNK1E-202ENST00000366216 QSER1Q2KHR3 1735 aa15.91■□□□□ 0.14
CSNK1E-202ENST00000366216 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
CSNK1E-202ENST00000366216 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
CSNK1E-202ENST00000366216 ACEP12821 1306 aa15.9■□□□□ 0.14
CSNK1E-202ENST00000366216 GIGYF1O75420 1035 aaPredicted RBP15.89■□□□□ 0.13
CSNK1E-202ENST00000366216 SGIP1Q9BQI5 828 aa15.89■□□□□ 0.13
CSNK1E-202ENST00000366216 MTFR1LQ9H019 292 aa15.89■□□□□ 0.13
CSNK1E-202ENST00000366216 STK32BQ9NY57 414 aa15.89■□□□□ 0.13
CSNK1E-202ENST00000366216 NHSQ6T4R5 1651 aa15.89■□□□□ 0.13
CSNK1E-202ENST00000366216 PAPPAQ13219 1627 aa15.88■□□□□ 0.13
CSNK1E-202ENST00000366216 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
CSNK1E-202ENST00000366216 BTAF1O14981 1849 aa15.87■□□□□ 0.13
CSNK1E-202ENST00000366216 BCL9O00512 1426 aa15.87■□□□□ 0.13
CSNK1E-202ENST00000366216 DDB1Q16531 1140 aa15.87■□□□□ 0.13
CSNK1E-202ENST00000366216 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
CSNK1E-202ENST00000366216 L3MBTL2Q969R5 705 aa15.87■□□□□ 0.13
CSNK1E-202ENST00000366216 CDK19Q9BWU1 502 aa15.87■□□□□ 0.13
CSNK1E-202ENST00000366216 TUBGCP6Q96RT7 1819 aa15.87■□□□□ 0.13
CSNK1E-202ENST00000366216 MAP3K5Q99683 1374 aa15.87■□□□□ 0.13
CSNK1E-202ENST00000366216 SLC15A2Q16348 729 aa15.86■□□□□ 0.13
CSNK1E-202ENST00000366216 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
CSNK1E-202ENST00000366216 TXNRD1Q16881 649 aa15.85■□□□□ 0.13
CSNK1E-202ENST00000366216 AATKQ6ZMQ8 1374 aa15.85■□□□□ 0.13
CSNK1E-202ENST00000366216 GCP02774 474 aa15.84■□□□□ 0.13
CSNK1E-202ENST00000366216 MARCH10Q8NA82 808 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-202ENST00000366216 ARXQ96QS3 562 aa15.84■□□□□ 0.13
CSNK1E-202ENST00000366216 GPR162Q16538 588 aa15.83■□□□□ 0.12
CSNK1E-202ENST00000366216 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
CSNK1E-202ENST00000366216 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
CSNK1E-202ENST00000366216 CCDC61Q9Y6R9 512 aa15.82■□□□□ 0.12
CSNK1E-202ENST00000366216 PIK3C2AO00443 1686 aa15.81■□□□□ 0.12
CSNK1E-202ENST00000366216 SLIT3O75094 1523 aa15.81■□□□□ 0.12
CSNK1E-202ENST00000366216 QRICH2Q9H0J4 1663 aa15.81■□□□□ 0.12
CSNK1E-202ENST00000366216 AXIN2Q9Y2T1 843 aa15.81■□□□□ 0.12
CSNK1E-202ENST00000366216 TOM1L2Q6ZVM7 507 aa15.8■□□□□ 0.12
CSNK1E-202ENST00000366216 ZBTB7CA1YPR0 619 aa15.79■□□□□ 0.12
CSNK1E-202ENST00000366216 KIAA1210Q9ULL0 1709 aa15.79■□□□□ 0.12
CSNK1E-202ENST00000366216 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
CSNK1E-202ENST00000366216 DIEXFQ68CQ4 756 aaKnown RBP15.78■□□□□ 0.12
CSNK1E-202ENST00000366216 CDCA7Q9BWT1 371 aaPredicted RBP15.78■□□□□ 0.12
CSNK1E-202ENST00000366216 WDR17Q8IZU2 1322 aa15.76■□□□□ 0.11
CSNK1E-202ENST00000366216 PPIP5K1Q6PFW1 1433 aa15.76■□□□□ 0.11
CSNK1E-202ENST00000366216 ABCC6O95255 1503 aa15.75■□□□□ 0.11
CSNK1E-202ENST00000366216 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
CSNK1E-202ENST00000366216 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
CSNK1E-202ENST00000366216 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-202ENST00000366216 CABP2Q9NPB3 220 aa15.74■□□□□ 0.11
CSNK1E-202ENST00000366216 LTN1O94822 1766 aa15.73■□□□□ 0.11
CSNK1E-202ENST00000366216 MAPK8IP2Q13387 824 aaPredicted RBP15.73■□□□□ 0.11
CSNK1E-202ENST00000366216 CPSF1Q10570 1443 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-202ENST00000366216 TNS2Q63HR2 1409 aa15.73■□□□□ 0.11
CSNK1E-202ENST00000366216 USP6P35125 1406 aa15.72■□□□□ 0.11
CSNK1E-202ENST00000366216 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
CSNK1E-202ENST00000366216 LY75O60449 1722 aa15.71■□□□□ 0.11
CSNK1E-202ENST00000366216 EXOC5O00471 708 aa15.71■□□□□ 0.11
CSNK1E-202ENST00000366216 NLRP6P59044 892 aa15.71■□□□□ 0.11
CSNK1E-202ENST00000366216 ZNF827Q17R98 1081 aa15.71■□□□□ 0.11
CSNK1E-202ENST00000366216 STAC3Q96MF2 364 aa15.71■□□□□ 0.11
CSNK1E-202ENST00000366216 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
CSNK1E-202ENST00000366216 CARD10Q9BWT7 1032 aa15.7■□□□□ 0.1
CSNK1E-202ENST00000366216 POLD1P28340 1107 aa15.69■□□□□ 0.1
CSNK1E-202ENST00000366216 CABP1Q9NZU7 370 aa15.69■□□□□ 0.1
CSNK1E-202ENST00000366216 EIF4G2P78344 907 aaKnown RBP eCLIP15.68■□□□□ 0.1
CSNK1E-202ENST00000366216 NLGN2Q8NFZ4 835 aa15.68■□□□□ 0.1
CSNK1E-202ENST00000366216 SLC16A10Q8TF71 515 aa15.68■□□□□ 0.1
CSNK1E-202ENST00000366216 LRRC4BQ9NT99 713 aa15.68■□□□□ 0.1
CSNK1E-202ENST00000366216 ATP10DQ9P241 1426 aa15.68■□□□□ 0.1
CSNK1E-202ENST00000366216 CCDC7Q96M83 1385 aa15.67■□□□□ 0.1
CSNK1E-202ENST00000366216 CSB-PGBD3P0DP91 1061 aa15.67■□□□□ 0.1
CSNK1E-202ENST00000366216 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-202ENST00000366216 ACSBG1Q96GR2 724 aa15.67■□□□□ 0.1
CSNK1E-202ENST00000366216 NFAT5O94916 1531 aa15.67■□□□□ 0.1
CSNK1E-202ENST00000366216 GRIN3BO60391 1043 aa15.66■□□□□ 0.1
CSNK1E-202ENST00000366216 YBX3P16989 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
CSNK1E-202ENST00000366216 HSPA6P17066 643 aa15.66■□□□□ 0.1
CSNK1E-202ENST00000366216 DOT1LQ8TEK3 1739 aa15.65■□□□□ 0.1
CSNK1E-202ENST00000366216 AKT1S1Q96B36 256 aa15.65■□□□□ 0.1
CSNK1E-202ENST00000366216 SOX12O15370 315 aa15.64■□□□□ 0.09
CSNK1E-202ENST00000366216 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
CSNK1E-202ENST00000366216 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
CSNK1E-202ENST00000366216 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
CSNK1E-202ENST00000366216 GPBP1L1Q9HC44 474 aaPredicted RBP15.63■□□□□ 0.09
CSNK1E-202ENST00000366216 TAF1LQ8IZX4 1826 aa15.63■□□□□ 0.09
CSNK1E-202ENST00000366216 USP54Q70EL1 1684 aa15.63■□□□□ 0.09
CSNK1E-202ENST00000366216 CENPJQ9HC77 1338 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms