RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 PDCL2Q8N4E4 241 aa21.36■■□□□ 1.01
SMG5-201ENST00000361813 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
SMG5-201ENST00000361813 AIMP1Q12904 312 aaKnown RBP21.35■■□□□ 1.01
SMG5-201ENST00000361813 KRT85P78386 507 aa21.35■■□□□ 1.01
SMG5-201ENST00000361813 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
SMG5-201ENST00000361813 STK3Q13188 491 aa21.34■■□□□ 1.01
SMG5-201ENST00000361813 CPLX2Q6PUV4 134 aaKnown RBP21.34■■□□□ 1.01
SMG5-201ENST00000361813 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
SMG5-201ENST00000361813 ZSCAN23Q3MJ62 389 aa21.34■■□□□ 1.01
SMG5-201ENST00000361813 NUTM2GQ5VZR2 741 aa21.34■■□□□ 1.01
SMG5-201ENST00000361813 NUCB1Q02818 461 aa21.33■■□□□ 1.01
SMG5-201ENST00000361813 NAT10Q9H0A0 1025 aaKnown RBP21.33■■□□□ 1.01
SMG5-201ENST00000361813 SYNE3Q6ZMZ3 975 aa21.33■■□□□ 1
SMG5-201ENST00000361813 DDX58O95786 925 aaKnown RBP21.33■■□□□ 1
SMG5-201ENST00000361813 CWC27Q6UX04 472 aaKnown RBP21.33■■□□□ 1
SMG5-201ENST00000361813 FERMT3Q86UX7 667 aa21.32■■□□□ 1
SMG5-201ENST00000361813 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
SMG5-201ENST00000361813 SMC2O95347 1197 aa21.31■■□□□ 1
SMG5-201ENST00000361813 MIS18AQ9NYP9 233 aa21.31■■□□□ 1
SMG5-201ENST00000361813 ABCC11Q96J66 1382 aa21.31■■□□□ 1
SMG5-201ENST00000361813 AEBP1Q8IUX7 1158 aa21.31■■□□□ 1
SMG5-201ENST00000361813 CCDC66A2RUB6 948 aa21.3■■□□□ 1
SMG5-201ENST00000361813 HDGFL1Q5TGJ6 251 aa21.3■■□□□ 1
SMG5-201ENST00000361813 JAKMIP1Q96N16 626 aaKnown RBP21.3■■□□□ 1
SMG5-201ENST00000361813 NUP62CLQ9H1M0 184 aa21.3■■□□□ 1
SMG5-201ENST00000361813 FILIP1Q7Z7B0 1213 aa21.3■■□□□ 1
SMG5-201ENST00000361813 PRAG1Q86YV5 1406 aa21.3■■□□□ 1
SMG5-201ENST00000361813 TPM1P09493 284 aa21.29■■□□□ 1
SMG5-201ENST00000361813 NEUROD6Q96NK8 337 aa21.29■■□□□ 1
SMG5-201ENST00000361813 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
SMG5-201ENST00000361813 CAMK4Q16566 473 aa21.29■■□□□ 1
SMG5-201ENST00000361813 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
SMG5-201ENST00000361813 GAS2L2Q8NHY3 880 aa21.29■■□□□ 1
SMG5-201ENST00000361813 SRCIN1Q9C0H9 1055 aa21.29■■□□□ 1
SMG5-201ENST00000361813 TRIM29Q14134 588 aa21.29■■□□□ 1
SMG5-201ENST00000361813 SNX21Q969T3 373 aa21.29■■□□□ 1
SMG5-201ENST00000361813 APPP05067 770 aa21.28■■□□□ 1
SMG5-201ENST00000361813 NLRP6P59044 892 aa21.28■■□□□ 1
SMG5-201ENST00000361813 MX1P20591 662 aa21.28■■□□□ 1
SMG5-201ENST00000361813 SRGAP3O43295 1099 aa21.28■■□□□ 1
SMG5-201ENST00000361813 MCM10Q7L590 875 aa21.28■■□□□ 1
SMG5-201ENST00000361813 NOC3LQ8WTT2 800 aaKnown RBP21.28■■□□□ 1
SMG5-201ENST00000361813 LARP6Q9BRS8 491 aaKnown RBP21.28■■□□□ 1
SMG5-201ENST00000361813 ZHX1Q9UKY1 873 aaPredicted RBP21.28■■□□□ 1
SMG5-201ENST00000361813 TXNDC2Q86VQ3 553 aa21.28■■□□□ 1
SMG5-201ENST00000361813 PDILTQ8N807 584 aa21.28■■□□□ 1
SMG5-201ENST00000361813 PDRG1Q9NUG6 133 aa21.28■■□□□ 1
SMG5-201ENST00000361813 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
SMG5-201ENST00000361813 TSR1Q2NL82 804 aaKnown RBP21.27■■□□□ 1
SMG5-201ENST00000361813 CCDC183Q5T5S1 534 aa21.27■■□□□ 1
SMG5-201ENST00000361813 RIC3Q7Z5B4 369 aa21.27■■□□□ 1
SMG5-201ENST00000361813 SPATA32Q96LK8 384 aa21.27■■□□□ 1
SMG5-201ENST00000361813 RAB3GAP1Q15042 981 aa21.26■□□□□ 0.99
SMG5-201ENST00000361813 CCDC83Q8IWF9 413 aa21.26■□□□□ 0.99
SMG5-201ENST00000361813 DDX54Q8TDD1 881 aaKnown RBP21.26■□□□□ 0.99
SMG5-201ENST00000361813 DMRT2Q9Y5R5 561 aa21.26■□□□□ 0.99
SMG5-201ENST00000361813 F6X3S4 739 aa21.26■□□□□ 0.99
SMG5-201ENST00000361813 CASTP20810 708 aaKnown RBP21.26■□□□□ 0.99
SMG5-201ENST00000361813 ATAD2Q6PL18 1390 aa21.26■□□□□ 0.99
SMG5-201ENST00000361813 MCM5P33992 734 aa21.26■□□□□ 0.99
SMG5-201ENST00000361813 SMC5Q8IY18 1101 aa21.26■□□□□ 0.99
SMG5-201ENST00000361813 PODXL2Q9NZ53 605 aa21.25■□□□□ 0.99
SMG5-201ENST00000361813 PRIM1P49642 420 aaKnown RBP21.25■□□□□ 0.99
SMG5-201ENST00000361813 TRDNQ13061 729 aa21.25■□□□□ 0.99
SMG5-201ENST00000361813 MAP3K11Q16584 847 aa21.25■□□□□ 0.99
SMG5-201ENST00000361813 TCOF1Q13428 1488 aaKnown RBP21.25■□□□□ 0.99
SMG5-201ENST00000361813 ZNF830Q96NB3 372 aaPredicted RBP21.25■□□□□ 0.99
SMG5-201ENST00000361813 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
SMG5-201ENST00000361813 DYNC1I1O14576 645 aa21.24■□□□□ 0.99
SMG5-201ENST00000361813 TSHZ3Q63HK5 1081 aa21.24■□□□□ 0.99
SMG5-201ENST00000361813 ADCY5O95622 1261 aa21.24■□□□□ 0.99
SMG5-201ENST00000361813 LRRFIP1Q32MZ4 808 aaKnown RBP21.24■□□□□ 0.99
SMG5-201ENST00000361813 DNAJC2Q99543 621 aaKnown RBP21.24■□□□□ 0.99
SMG5-201ENST00000361813 TTC22Q5TAA0 569 aa21.24■□□□□ 0.99
SMG5-201ENST00000361813 CFAP43Q8NDM7 1665 aa21.23■□□□□ 0.99
SMG5-201ENST00000361813 KDM4AO75164 1064 aa21.23■□□□□ 0.99
SMG5-201ENST00000361813 BLOC1S2Q6QNY1 142 aa21.23■□□□□ 0.99
SMG5-201ENST00000361813 LRSAM1Q6UWE0 723 aa21.23■□□□□ 0.99
SMG5-201ENST00000361813 TEX14Q8IWB6 1497 aa21.23■□□□□ 0.99
SMG5-201ENST00000361813 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
SMG5-201ENST00000361813 AKAP17AQ02040 695 aaKnown RBP21.23■□□□□ 0.99
SMG5-201ENST00000361813 EMILIN1Q9Y6C2 1016 aa21.23■□□□□ 0.99
SMG5-201ENST00000361813 ME1P48163 572 aa21.22■□□□□ 0.99
SMG5-201ENST00000361813 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
SMG5-201ENST00000361813 RALYLQ86SE5 291 aaKnown RBP21.22■□□□□ 0.99
SMG5-201ENST00000361813 SIL1Q9H173 461 aa21.22■□□□□ 0.99
SMG5-201ENST00000361813 RPGRIP1LQ68CZ1 1315 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 HCLS1P14317 486 aaPredicted RBP21.21■□□□□ 0.99
SMG5-201ENST00000361813 SDSP20132 328 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 WASHC4Q2M389 1173 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 ZSCAN31Q96LW9 406 aaPredicted RBP21.21■□□□□ 0.99
SMG5-201ENST00000361813 ZKSCAN5Q9Y2L8 839 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 HIP1O00291 1037 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 TMX3Q96JJ7 454 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 FBLN1P23142 703 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 STK38Q15208 465 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 CARD14Q9BXL6 1004 aa21.21■□□□□ 0.99
SMG5-201ENST00000361813 HOOK1Q9UJC3 728 aaKnown RBP21.21■□□□□ 0.99
SMG5-201ENST00000361813 NFXL1Q6ZNB6 911 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms