RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
GABPA-201ENST00000354828 DNTTIP2Q5QJE6 756 aaKnown RBP11.85□□□□□ -0.51
GABPA-201ENST00000354828 SIL1Q9H173 461 aa11.85□□□□□ -0.51
GABPA-201ENST00000354828 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
GABPA-201ENST00000354828 SLC4A3P48751 1232 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 NFE2L2Q16236 605 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 RALYLQ86SE5 291 aaKnown RBP11.84□□□□□ -0.51
GABPA-201ENST00000354828 IGHMBP2P38935 993 aaKnown RBP11.84□□□□□ -0.51
GABPA-201ENST00000354828 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 IFNL2Q8IZJ0 200 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 TRIM29Q14134 588 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 FSD1Q9BTV5 496 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
GABPA-201ENST00000354828 CREBRFQ8IUR6 639 aa11.83□□□□□ -0.51
GABPA-201ENST00000354828 DRC7Q8IY82 874 aa11.83□□□□□ -0.51
GABPA-201ENST00000354828 LNPKQ9C0E8 428 aa11.83□□□□□ -0.51
GABPA-201ENST00000354828 DDB1Q16531 1140 aa11.83□□□□□ -0.52
GABPA-201ENST00000354828 RPRD2Q5VT52 1461 aaKnown RBP11.83□□□□□ -0.52
GABPA-201ENST00000354828 REC8O95072 547 aa11.83□□□□□ -0.52
GABPA-201ENST00000354828 GNAI2P04899 355 aa11.83□□□□□ -0.52
GABPA-201ENST00000354828 ABCA8O94911 1581 aa11.83□□□□□ -0.52
GABPA-201ENST00000354828 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
GABPA-201ENST00000354828 MCTP1Q6DN14 999 aa11.82□□□□□ -0.52
GABPA-201ENST00000354828 GBP4Q96PP9 640 aa11.82□□□□□ -0.52
GABPA-201ENST00000354828 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
GABPA-201ENST00000354828 CCT4P50991 539 aaKnown RBP11.81□□□□□ -0.52
GABPA-201ENST00000354828 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
GABPA-201ENST00000354828 FOXD4L5Q5VV16 416 aaPredicted RBP11.81□□□□□ -0.52
GABPA-201ENST00000354828 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
GABPA-201ENST00000354828 FOXD4L4Q8WXT5 416 aaPredicted RBP11.81□□□□□ -0.52
GABPA-201ENST00000354828 RFC4P35249 363 aa11.81□□□□□ -0.52
GABPA-201ENST00000354828 ATP2B2Q01814 1243 aa11.81□□□□□ -0.52
GABPA-201ENST00000354828 ERC1Q8IUD2 1116 aa11.81□□□□□ -0.52
GABPA-201ENST00000354828 THUMPD2Q9BTF0 503 aaKnown RBP11.81□□□□□ -0.52
GABPA-201ENST00000354828 CCDC43Q96MW1 224 aaKnown RBP11.81□□□□□ -0.52
GABPA-201ENST00000354828 CDCA7LQ96GN5 454 aa11.81□□□□□ -0.52
GABPA-201ENST00000354828 NOP58Q9Y2X3 529 aaKnown RBP11.81□□□□□ -0.52
GABPA-201ENST00000354828 NBPF14Q5TI25 921 aa11.8□□□□□ -0.52
GABPA-201ENST00000354828 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
GABPA-201ENST00000354828 TBX22Q9Y458 520 aa11.8□□□□□ -0.52
GABPA-201ENST00000354828 ATP7AQ04656 1500 aa11.8□□□□□ -0.52
GABPA-201ENST00000354828 SLC3A2P08195 630 aaKnown RBP11.8□□□□□ -0.52
GABPA-201ENST00000354828 CHAF1AQ13111 956 aaPredicted RBP11.8□□□□□ -0.52
GABPA-201ENST00000354828 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
GABPA-201ENST00000354828 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
GABPA-201ENST00000354828 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
GABPA-201ENST00000354828 PAXIP1Q6ZW49 1069 aaPredicted RBP11.8□□□□□ -0.52
GABPA-201ENST00000354828 ZCRB1Q8TBF4 217 aaKnown RBP11.8□□□□□ -0.52
GABPA-201ENST00000354828 C1orf115Q9H7X2 142 aa11.79□□□□□ -0.52
GABPA-201ENST00000354828 TMPOP42166 694 aaKnown RBP11.79□□□□□ -0.52
GABPA-201ENST00000354828 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
GABPA-201ENST00000354828 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
GABPA-201ENST00000354828 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
GABPA-201ENST00000354828 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
GABPA-201ENST00000354828 SCAF11Q99590 1463 aaKnown RBP11.79□□□□□ -0.52
GABPA-201ENST00000354828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.79□□□□□ -0.52
GABPA-201ENST00000354828 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
GABPA-201ENST00000354828 DUSP27Q5VZP5 1158 aa11.78□□□□□ -0.52
GABPA-201ENST00000354828 TTC21BQ7Z4L5 1316 aa11.78□□□□□ -0.52
GABPA-201ENST00000354828 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
GABPA-201ENST00000354828 WDR63Q8IWG1 891 aa11.78□□□□□ -0.52
GABPA-201ENST00000354828 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.78□□□□□ -0.52
GABPA-201ENST00000354828 CNTROBQ8N137 903 aa11.78□□□□□ -0.52
GABPA-201ENST00000354828 TEX13AQ9BXU3 409 aaPredicted RBP11.78□□□□□ -0.52
GABPA-201ENST00000354828 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
GABPA-201ENST00000354828 RRP12Q5JTH9 1297 aaKnown RBP11.78□□□□□ -0.52
GABPA-201ENST00000354828 ZNF622Q969S3 477 aaKnown RBP eCLIP11.78□□□□□ -0.524e-6■□□□□ 9.9
GABPA-201ENST00000354828 ERCC6L2Q5T890 1561 aa11.77□□□□□ -0.52
GABPA-201ENST00000354828 GPTP24298 496 aa11.77□□□□□ -0.52
GABPA-201ENST00000354828 TPM4P67936 248 aa11.77□□□□□ -0.53
GABPA-201ENST00000354828 L1TD1Q5T7N2 865 aaKnown RBP11.77□□□□□ -0.53
GABPA-201ENST00000354828 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
GABPA-201ENST00000354828 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
GABPA-201ENST00000354828 SART3Q15020 963 aaKnown RBP11.76□□□□□ -0.53
GABPA-201ENST00000354828 MYD88Q99836 296 aa11.76□□□□□ -0.53
GABPA-201ENST00000354828 BTG4Q9NY30 223 aa11.76□□□□□ -0.53
GABPA-201ENST00000354828 NINLQ9Y2I6 1382 aa11.76□□□□□ -0.53
GABPA-201ENST00000354828 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
GABPA-201ENST00000354828 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
GABPA-201ENST00000354828 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
GABPA-201ENST00000354828 SYAP1Q96A49 352 aaPredicted RBP11.76□□□□□ -0.53
GABPA-201ENST00000354828 ZBTB3Q9H5J0 574 aa11.76□□□□□ -0.53
GABPA-201ENST00000354828 SRGAP3O43295 1099 aa11.76□□□□□ -0.53
GABPA-201ENST00000354828 MAPKBP1O60336 1514 aa11.76□□□□□ -0.53
GABPA-201ENST00000354828 FBLN1P23142 703 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 METTL24Q5JXM2 366 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 STK11IPQ8N1F8 1099 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 PPIP5K1Q6PFW1 1433 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 YEATS2Q9ULM3 1422 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 IL2RBP14784 551 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 POLD1P28340 1107 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
GABPA-201ENST00000354828 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 MAGI3Q5TCQ9 1506 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 ZFYVE16Q7Z3T8 1539 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
GABPA-201ENST00000354828 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms