RNA–Protein interactions for RNA: ENST00000343619.8

ATP6V0A1-202, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP6V0A1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-202ENST00000343619 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
ATP6V0A1-202ENST00000343619 USP31Q70CQ4 1352 aa12.34□□□□□ -0.43
ATP6V0A1-202ENST00000343619 MST1RQ04912 1400 aa12.34□□□□□ -0.43
ATP6V0A1-202ENST00000343619 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
ATP6V0A1-202ENST00000343619 HOXC9P31274 260 aa12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 STRCQ7RTU9 1775 aa12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 SBNO1A3KN83 1393 aa12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 THUMPD2Q9BTF0 503 aaKnown RBP12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 BRINP3Q76B58 766 aa12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
ATP6V0A1-202ENST00000343619 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
ATP6V0A1-202ENST00000343619 STRCP1A6NGW2 1772 aa12.32□□□□□ -0.44
ATP6V0A1-202ENST00000343619 PLIN1O60240 522 aa12.32□□□□□ -0.44
ATP6V0A1-202ENST00000343619 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
ATP6V0A1-202ENST00000343619 PIP4K2BP78356 416 aa12.32□□□□□ -0.44
ATP6V0A1-202ENST00000343619 LRRC7Q96NW7 1537 aa12.31□□□□□ -0.44
ATP6V0A1-202ENST00000343619 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
ATP6V0A1-202ENST00000343619 TSR2Q969E8 191 aaKnown RBP12.31□□□□□ -0.44
ATP6V0A1-202ENST00000343619 EYA1Q99502 592 aa12.31□□□□□ -0.44
ATP6V0A1-202ENST00000343619 NFE2L2Q16236 605 aa12.31□□□□□ -0.44
ATP6V0A1-202ENST00000343619 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 NCOA3Q9Y6Q9 1424 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 ANP32EQ9BTT0 268 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 NRKQ7Z2Y5 1582 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 DCCP43146 1447 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 CHRNA2Q15822 529 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
ATP6V0A1-202ENST00000343619 PIK3C2AO00443 1686 aa12.29□□□□□ -0.44
ATP6V0A1-202ENST00000343619 RRP1P56182 461 aaKnown RBP12.29□□□□□ -0.44
ATP6V0A1-202ENST00000343619 IP6K1Q92551 441 aa12.29□□□□□ -0.44
ATP6V0A1-202ENST00000343619 FAM83GA6ND36 823 aa12.29□□□□□ -0.44
ATP6V0A1-202ENST00000343619 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
ATP6V0A1-202ENST00000343619 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
ATP6V0A1-202ENST00000343619 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
ATP6V0A1-202ENST00000343619 BCL2L13Q9BXK5 485 aa12.28□□□□□ -0.44
ATP6V0A1-202ENST00000343619 RTF1Q92541 710 aaKnown RBP12.27□□□□□ -0.44
ATP6V0A1-202ENST00000343619 FRAT1Q92837 279 aaPredicted RBP12.27□□□□□ -0.44
ATP6V0A1-202ENST00000343619 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
ATP6V0A1-202ENST00000343619 CCDC27Q2M243 656 aa12.27□□□□□ -0.45
ATP6V0A1-202ENST00000343619 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.45
ATP6V0A1-202ENST00000343619 ARHGEF25Q86VW2 580 aa12.26□□□□□ -0.45
ATP6V0A1-202ENST00000343619 ELL2O00472 640 aaPredicted RBP12.26□□□□□ -0.45
ATP6V0A1-202ENST00000343619 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
ATP6V0A1-202ENST00000343619 ANKRD24Q8TF21 1146 aa12.26□□□□□ -0.45
ATP6V0A1-202ENST00000343619 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
ATP6V0A1-202ENST00000343619 EXOSC9Q06265 439 aaKnown RBP12.26□□□□□ -0.45
ATP6V0A1-202ENST00000343619 MCM10Q7L590 875 aa12.26□□□□□ -0.45
ATP6V0A1-202ENST00000343619 SPATA31A3Q5VYP0 1347 aa12.25□□□□□ -0.45
ATP6V0A1-202ENST00000343619 BCAR3O75815 825 aa12.25□□□□□ -0.45
ATP6V0A1-202ENST00000343619 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
ATP6V0A1-202ENST00000343619 CALD1Q05682 793 aaKnown RBP12.25□□□□□ -0.45
ATP6V0A1-202ENST00000343619 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
ATP6V0A1-202ENST00000343619 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
ATP6V0A1-202ENST00000343619 USP35Q9P2H5 1018 aa12.24□□□□□ -0.45
ATP6V0A1-202ENST00000343619 FANCIQ9NVI1 1328 aa12.24□□□□□ -0.45
ATP6V0A1-202ENST00000343619 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
ATP6V0A1-202ENST00000343619 IQSEC2Q5JU85 1478 aa12.24□□□□□ -0.45
ATP6V0A1-202ENST00000343619 PHF23Q9BUL5 403 aaPredicted RBP12.24□□□□□ -0.45
ATP6V0A1-202ENST00000343619 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
ATP6V0A1-202ENST00000343619 RTL5Q5HYW3 569 aaPredicted RBP12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 CCDC9Q9Y3X0 531 aaKnown RBP12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 TNS3Q68CZ2 1445 aa12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 GAS2L2Q8NHY3 880 aa12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 EXOC6Q8TAG9 804 aa12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 CCDC136Q96JN2 1154 aa12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 PPP4R2Q9NY27 417 aa12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
ATP6V0A1-202ENST00000343619 KIF1AQ12756 1690 aa12.22□□□□□ -0.45
ATP6V0A1-202ENST00000343619 GNAI1P63096 354 aa12.22□□□□□ -0.45
ATP6V0A1-202ENST00000343619 TCERG1O14776 1098 aaKnown RBP12.22□□□□□ -0.45
ATP6V0A1-202ENST00000343619 USP19O94966 1318 aa12.22□□□□□ -0.45
ATP6V0A1-202ENST00000343619 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
ATP6V0A1-202ENST00000343619 RTL1A6NKG5 1358 aa12.21□□□□□ -0.45
ATP6V0A1-202ENST00000343619 STRN4Q9NRL3 753 aa12.21□□□□□ -0.45
ATP6V0A1-202ENST00000343619 SMC4Q9NTJ3 1288 aa12.21□□□□□ -0.45
ATP6V0A1-202ENST00000343619 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
ATP6V0A1-202ENST00000343619 KIAA0232Q92628 1395 aa12.21□□□□□ -0.46
ATP6V0A1-202ENST00000343619 C20orf194Q5TEA3 1177 aa12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 CLUAP1Q96AJ1 413 aa12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 NUTM2BA6NNL0 878 aaPredicted RBP12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 NUTM2EB1AL46 878 aaPredicted RBP12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 NUTM2AQ8IVF1 878 aaPredicted RBP12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 UBAP1LF5GYI3 381 aa12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 EVA1CP58658 441 aa12.2□□□□□ -0.46
ATP6V0A1-202ENST00000343619 SOS2Q07890 1332 aaPredicted RBP12.19□□□□□ -0.46
ATP6V0A1-202ENST00000343619 ZNF530Q6P9A1 599 aaPredicted RBP12.19□□□□□ -0.46
ATP6V0A1-202ENST00000343619 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
ATP6V0A1-202ENST00000343619 IL16Q14005 1332 aa12.19□□□□□ -0.46
ATP6V0A1-202ENST00000343619 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
ATP6V0A1-202ENST00000343619 GNAT3A8MTJ3 354 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms