RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 SYNJ1O43426 1573 aa19.58■□□□□ 0.72
CDC42BPG-201ENST00000342711 SYCP1Q15431 976 aa19.57■□□□□ 0.72
CDC42BPG-201ENST00000342711 CHD1LQ86WJ1 897 aa19.57■□□□□ 0.72
CDC42BPG-201ENST00000342711 CCT4P50991 539 aaKnown RBP19.57■□□□□ 0.72
CDC42BPG-201ENST00000342711 CNNM1Q9NRU3 951 aa19.57■□□□□ 0.72
CDC42BPG-201ENST00000342711 MVPQ14764 893 aaKnown RBP19.56■□□□□ 0.72
CDC42BPG-201ENST00000342711 DACH1Q9UI36 760 aa19.56■□□□□ 0.72
CDC42BPG-201ENST00000342711 NBPF1Q3BBV0 1214 aa19.56■□□□□ 0.72
CDC42BPG-201ENST00000342711 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
CDC42BPG-201ENST00000342711 HDGFL1Q5TGJ6 251 aa19.56■□□□□ 0.72
CDC42BPG-201ENST00000342711 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
CDC42BPG-201ENST00000342711 RRBP1Q9P2E9 1410 aaKnown RBP19.56■□□□□ 0.72
CDC42BPG-201ENST00000342711 FYCO1Q9BQS8 1478 aa19.55■□□□□ 0.72
CDC42BPG-201ENST00000342711 CASKIN1Q8WXD9 1431 aa19.55■□□□□ 0.72
CDC42BPG-201ENST00000342711 DHX8Q14562 1220 aaKnown RBP19.55■□□□□ 0.72
CDC42BPG-201ENST00000342711 RBM42Q9BTD8 480 aaKnown RBP19.55■□□□□ 0.72
CDC42BPG-201ENST00000342711 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.55■□□□□ 0.721e-6■■■■■ 34.8
CDC42BPG-201ENST00000342711 DEF6Q9H4E7 631 aa19.55■□□□□ 0.72
CDC42BPG-201ENST00000342711 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
CDC42BPG-201ENST00000342711 ATF7IPQ6VMQ6 1270 aa19.55■□□□□ 0.72
CDC42BPG-201ENST00000342711 NCOA2Q15596 1464 aa19.55■□□□□ 0.72
CDC42BPG-201ENST00000342711 ERLIN2O94905 339 aa19.54■□□□□ 0.72
CDC42BPG-201ENST00000342711 TMEM132AQ24JP5 1023 aa19.54■□□□□ 0.72
CDC42BPG-201ENST00000342711 CCDC181Q5TID7 509 aa19.54■□□□□ 0.72
CDC42BPG-201ENST00000342711 GOLGA6L10A6NI86 522 aa19.54■□□□□ 0.72
CDC42BPG-201ENST00000342711 PLCD4Q9BRC7 762 aa19.54■□□□□ 0.72
CDC42BPG-201ENST00000342711 TRIM22Q8IYM9 498 aa19.54■□□□□ 0.72
CDC42BPG-201ENST00000342711 SPATA32Q96LK8 384 aa19.54■□□□□ 0.72
CDC42BPG-201ENST00000342711 CCDC69A6NI79 296 aa19.53■□□□□ 0.72
CDC42BPG-201ENST00000342711 MCM4P33991 863 aa19.53■□□□□ 0.72
CDC42BPG-201ENST00000342711 SULT6B1Q6IMI4 303 aa19.53■□□□□ 0.72
CDC42BPG-201ENST00000342711 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
CDC42BPG-201ENST00000342711 WDR63Q8IWG1 891 aa19.53■□□□□ 0.72
CDC42BPG-201ENST00000342711 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
CDC42BPG-201ENST00000342711 TANGO6Q9C0B7 1094 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 SCAPERQ9BY12 1400 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 CBFA2T2O43439 604 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 NEFHP12036 1026 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 PKNOX2Q96KN3 472 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 PRAM1Q96QH2 718 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 SRCIN1Q9C0H9 1055 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 STIM1Q13586 685 aa19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 PNISRQ8TF01 805 aaKnown RBP19.52■□□□□ 0.72
CDC42BPG-201ENST00000342711 SMG6Q86US8 1419 aaKnown RBP19.52■□□□□ 0.71
CDC42BPG-201ENST00000342711 ERLIN1O75477 346 aa19.51■□□□□ 0.71
CDC42BPG-201ENST00000342711 HSP90AB3PQ58FF7 597 aa19.51■□□□□ 0.71
CDC42BPG-201ENST00000342711 GPRASP1Q5JY77 1395 aa19.51■□□□□ 0.71
CDC42BPG-201ENST00000342711 NUP133Q8WUM0 1156 aa19.51■□□□□ 0.71
CDC42BPG-201ENST00000342711 ZHX3Q9H4I2 956 aa19.51■□□□□ 0.71
CDC42BPG-201ENST00000342711 KIAA0754O94854 1291 aa19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 JAKMIP1Q96N16 626 aaKnown RBP19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 NUP62CLQ9H1M0 184 aa19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 BLOC1S2Q6QNY1 142 aa19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 KRI1Q8N9T8 703 aaKnown RBP19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 ESPNB1AK53 854 aa19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 CWC27Q6UX04 472 aaKnown RBP19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 AACSQ86V21 672 aa19.5■□□□□ 0.71
CDC42BPG-201ENST00000342711 ESCO1Q5FWF5 840 aa19.49■□□□□ 0.71
CDC42BPG-201ENST00000342711 LUC7LQ9NQ29 371 aaKnown RBP19.49■□□□□ 0.71
CDC42BPG-201ENST00000342711 GNL3LQ9NVN8 582 aaKnown RBP19.49■□□□□ 0.71
CDC42BPG-201ENST00000342711 FAM193AP78312 1265 aa19.49■□□□□ 0.71
CDC42BPG-201ENST00000342711 NACAP1Q9BZK3 213 aa19.49■□□□□ 0.71
CDC42BPG-201ENST00000342711 ATP2B2Q01814 1243 aa19.49■□□□□ 0.71
CDC42BPG-201ENST00000342711 EIF3JO75822 258 aaKnown RBP19.49■□□□□ 0.71
CDC42BPG-201ENST00000342711 CENPHQ9H3R5 247 aa19.49■□□□□ 0.71
CDC42BPG-201ENST00000342711 CIZ1Q9ULV3 898 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPG-201ENST00000342711 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
CDC42BPG-201ENST00000342711 NESP48681 1621 aa19.48■□□□□ 0.71
CDC42BPG-201ENST00000342711 FILIP1Q7Z7B0 1213 aa19.48■□□□□ 0.71
CDC42BPG-201ENST00000342711 CEP57L1Q8IYX8 460 aa19.48■□□□□ 0.71
CDC42BPG-201ENST00000342711 ZSCAN31Q96LW9 406 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPG-201ENST00000342711 PDCL3Q9H2J4 239 aa19.47■□□□□ 0.71
CDC42BPG-201ENST00000342711 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
CDC42BPG-201ENST00000342711 UPF3BQ9BZI7 483 aaKnown RBP19.47■□□□□ 0.71
CDC42BPG-201ENST00000342711 CFAP45Q9UL16 551 aa19.47■□□□□ 0.71
CDC42BPG-201ENST00000342711 MYL6BP14649 208 aa19.47■□□□□ 0.71
CDC42BPG-201ENST00000342711 FKBP4Q02790 459 aaKnown RBP eCLIP19.47■□□□□ 0.71
CDC42BPG-201ENST00000342711 FAM69CQ0P6D2 419 aa19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 CDK19Q9BWU1 502 aa19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 ARHGAP5Q13017 1502 aa19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 ANKRD62A6NC57 917 aa19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 SRGAP3O43295 1099 aa19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 SEPT7Q16181 437 aaKnown RBP19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 NOL7Q9UMY1 257 aaKnown RBP19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 SYCE3A1L190 88 aa19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 IL1RAPL2Q9NP60 686 aa19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 CABP1Q9NZU7 370 aa19.46■□□□□ 0.71
CDC42BPG-201ENST00000342711 TXLNBQ8N3L3 684 aa19.45■□□□□ 0.7
CDC42BPG-201ENST00000342711 TATP17735 454 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPG-201ENST00000342711 ENOX2Q16206 610 aaKnown RBP19.45■□□□□ 0.7
CDC42BPG-201ENST00000342711 CCDC184Q52MB2 194 aa19.45■□□□□ 0.7
CDC42BPG-201ENST00000342711 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
CDC42BPG-201ENST00000342711 TXNDC2Q86VQ3 553 aa19.45■□□□□ 0.7
CDC42BPG-201ENST00000342711 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
CDC42BPG-201ENST00000342711 DHX37Q8IY37 1157 aaKnown RBP19.44■□□□□ 0.7
CDC42BPG-201ENST00000342711 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
CDC42BPG-201ENST00000342711 CABP4P57796 275 aa19.44■□□□□ 0.7
CDC42BPG-201ENST00000342711 TAX1BP1Q86VP1 789 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms