RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 CDC45O75419 566 aa17.85■□□□□ 0.45
FGFR1-202ENST00000335922 RIC3Q7Z5B4 369 aa17.85■□□□□ 0.45
FGFR1-202ENST00000335922 CABLES1Q8TDN4 633 aa17.85■□□□□ 0.45
FGFR1-202ENST00000335922 SMARCA5O60264 1052 aaPredicted RBP17.85■□□□□ 0.45
FGFR1-202ENST00000335922 SKOR2Q2VWA4 1001 aaPredicted RBP17.85■□□□□ 0.45
FGFR1-202ENST00000335922 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
FGFR1-202ENST00000335922 KCNH5Q8NCM2 988 aa17.84■□□□□ 0.45
FGFR1-202ENST00000335922 NGLY1Q96IV0 654 aa17.84■□□□□ 0.45
FGFR1-202ENST00000335922 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
FGFR1-202ENST00000335922 ABCA8O94911 1581 aa17.84■□□□□ 0.45
FGFR1-202ENST00000335922 G3V3G9 751 aa17.83■□□□□ 0.45
FGFR1-202ENST00000335922 XRCC6P12956 609 aaKnown RBP eCLIP17.83■□□□□ 0.45
FGFR1-202ENST00000335922 DCAF8Q5TAQ9 597 aa17.83■□□□□ 0.45
FGFR1-202ENST00000335922 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.44
FGFR1-202ENST00000335922 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.44
FGFR1-202ENST00000335922 DDX58O95786 925 aaKnown RBP17.83■□□□□ 0.44
FGFR1-202ENST00000335922 NEK4P51957 841 aa17.83■□□□□ 0.44
FGFR1-202ENST00000335922 SSFA2P28290 1259 aa17.83■□□□□ 0.44
FGFR1-202ENST00000335922 CABP4P57796 275 aa17.83■□□□□ 0.44
FGFR1-202ENST00000335922 MCM10Q7L590 875 aa17.83■□□□□ 0.44
FGFR1-202ENST00000335922 TSPOAP1O95153 1857 aa17.82■□□□□ 0.44
FGFR1-202ENST00000335922 DNAJC5Q9H3Z4 198 aa17.82■□□□□ 0.44
FGFR1-202ENST00000335922 PTCD1O75127 700 aaKnown RBP17.82■□□□□ 0.44
FGFR1-202ENST00000335922 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
FGFR1-202ENST00000335922 ESPNB1AK53 854 aa17.81■□□□□ 0.44
FGFR1-202ENST00000335922 PTMSP20962 102 aa17.81■□□□□ 0.44
FGFR1-202ENST00000335922 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
FGFR1-202ENST00000335922 SHANK2Q9UPX8 1470 aa17.8■□□□□ 0.44
FGFR1-202ENST00000335922 K7ELQ4 463 aaPredicted RBP17.8■□□□□ 0.44
FGFR1-202ENST00000335922 AAMPQ13685 434 aa17.8■□□□□ 0.44
FGFR1-202ENST00000335922 INTS3Q68E01 1043 aaKnown RBP17.8■□□□□ 0.44
FGFR1-202ENST00000335922 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
FGFR1-202ENST00000335922 REC8O95072 547 aa17.79■□□□□ 0.44
FGFR1-202ENST00000335922 LTKP29376 864 aa17.79■□□□□ 0.44
FGFR1-202ENST00000335922 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
FGFR1-202ENST00000335922 UHRF1BP1Q6BDS2 1440 aa17.79■□□□□ 0.44
FGFR1-202ENST00000335922 MSH6P52701 1360 aa17.78■□□□□ 0.44
FGFR1-202ENST00000335922 SPG7Q9UQ90 795 aa17.78■□□□□ 0.44
FGFR1-202ENST00000335922 MAP4K4O95819 1239 aaPredicted RBP17.78■□□□□ 0.44
FGFR1-202ENST00000335922 MYL6BP14649 208 aa17.78■□□□□ 0.44
FGFR1-202ENST00000335922 NEO1Q92859 1461 aa17.78■□□□□ 0.44
FGFR1-202ENST00000335922 FYB1O15117 783 aa17.78■□□□□ 0.44
FGFR1-202ENST00000335922 SLC4A2P04920 1241 aa17.78■□□□□ 0.44
FGFR1-202ENST00000335922 MBD5Q9P267 1494 aa17.78■□□□□ 0.44
FGFR1-202ENST00000335922 FCHSD2O94868 740 aa17.77■□□□□ 0.44
FGFR1-202ENST00000335922 TSHZ3Q63HK5 1081 aa17.77■□□□□ 0.44
FGFR1-202ENST00000335922 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.44
FGFR1-202ENST00000335922 CCDC27Q2M243 656 aa17.76■□□□□ 0.43
FGFR1-202ENST00000335922 C19orf44Q9H6X5 657 aa17.76■□□□□ 0.43
FGFR1-202ENST00000335922 RRAGDQ9NQL2 400 aaPredicted RBP17.76■□□□□ 0.43
FGFR1-202ENST00000335922 MPRIPQ6WCQ1 1025 aa17.76■□□□□ 0.43
FGFR1-202ENST00000335922 CFAP44Q96MT7 982 aa17.76■□□□□ 0.43
FGFR1-202ENST00000335922 GCC2Q8IWJ2 1684 aa17.76■□□□□ 0.43
FGFR1-202ENST00000335922 TBX22Q9Y458 520 aa17.76■□□□□ 0.43
FGFR1-202ENST00000335922 EXOC6BQ9Y2D4 811 aa17.75■□□□□ 0.43
FGFR1-202ENST00000335922 NUCB2P80303 420 aa17.75■□□□□ 0.43
FGFR1-202ENST00000335922 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
FGFR1-202ENST00000335922 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
FGFR1-202ENST00000335922 SYAP1Q96A49 352 aaPredicted RBP17.75■□□□□ 0.43
FGFR1-202ENST00000335922 GCC1Q96CN9 775 aa17.74■□□□□ 0.43
FGFR1-202ENST00000335922 GPATCH3Q96I76 525 aa17.74■□□□□ 0.43
FGFR1-202ENST00000335922 NINLQ9Y2I6 1382 aa17.74■□□□□ 0.43
FGFR1-202ENST00000335922 TTC21BQ7Z4L5 1316 aa17.74■□□□□ 0.43
FGFR1-202ENST00000335922 TBC1D9Q6ZT07 1266 aa17.74■□□□□ 0.43
FGFR1-202ENST00000335922 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
FGFR1-202ENST00000335922 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
FGFR1-202ENST00000335922 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
FGFR1-202ENST00000335922 F6X3S4 739 aa17.73■□□□□ 0.43
FGFR1-202ENST00000335922 TOM1O60784 492 aa17.73■□□□□ 0.43
FGFR1-202ENST00000335922 TULP1O00294 542 aaPredicted RBP17.73■□□□□ 0.43
FGFR1-202ENST00000335922 LARP6Q9BRS8 491 aaKnown RBP17.73■□□□□ 0.43
FGFR1-202ENST00000335922 UPF3BQ9BZI7 483 aaKnown RBP17.73■□□□□ 0.43
FGFR1-202ENST00000335922 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
FGFR1-202ENST00000335922 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
FGFR1-202ENST00000335922 BTBD11A6QL63 1104 aa17.72■□□□□ 0.43
FGFR1-202ENST00000335922 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
FGFR1-202ENST00000335922 VPS37CA5D8V6 355 aaPredicted RBP17.72■□□□□ 0.43
FGFR1-202ENST00000335922 IL1RAPL2Q9NP60 686 aa17.72■□□□□ 0.43
FGFR1-202ENST00000335922 TTC37Q6PGP7 1564 aa17.72■□□□□ 0.43
FGFR1-202ENST00000335922 NPATQ14207 1427 aa17.72■□□□□ 0.43
FGFR1-202ENST00000335922 NRDCO43847 1150 aa17.72■□□□□ 0.43
FGFR1-202ENST00000335922 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
FGFR1-202ENST00000335922 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
FGFR1-202ENST00000335922 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
FGFR1-202ENST00000335922 UBTFL1P0CB47 393 aaPredicted RBP17.7■□□□□ 0.42
FGFR1-202ENST00000335922 FOSBP53539 338 aa17.7■□□□□ 0.42
FGFR1-202ENST00000335922 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
FGFR1-202ENST00000335922 GDPD2Q9HCC8 539 aa17.7■□□□□ 0.42
FGFR1-202ENST00000335922 NPHP3Q7Z494 1330 aa17.7■□□□□ 0.42
FGFR1-202ENST00000335922 PPP1R1BQ9UD71 204 aaPredicted RBP17.7■□□□□ 0.42
FGFR1-202ENST00000335922 ADGRL2O95490 1459 aa17.7■□□□□ 0.42
FGFR1-202ENST00000335922 KDM5CP41229 1560 aa17.7■□□□□ 0.42
FGFR1-202ENST00000335922 PPIP5K1Q6PFW1 1433 aa17.7■□□□□ 0.42
FGFR1-202ENST00000335922 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
FGFR1-202ENST00000335922 ZFYVE16Q7Z3T8 1539 aa17.69■□□□□ 0.42
FGFR1-202ENST00000335922 ARHGEF12Q9NZN5 1544 aa17.69■□□□□ 0.42
FGFR1-202ENST00000335922 GOLGA6L6A8MZA4 724 aa17.69■□□□□ 0.42
FGFR1-202ENST00000335922 RABEP1Q15276 862 aa17.69■□□□□ 0.42
FGFR1-202ENST00000335922 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
FGFR1-202ENST00000335922 SYCE3A1L190 88 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms