RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 FCHSD2O94868 740 aa15.5■□□□□ 0.07
VPS33B-201ENST00000333371 NCKAP5LQ9HCH0 1330 aa15.5■□□□□ 0.07
VPS33B-201ENST00000333371 ATP7BP35670 1465 aa15.49■□□□□ 0.07
VPS33B-201ENST00000333371 CEBPAP49715 358 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-201ENST00000333371 CHD1LQ86WJ1 897 aa15.49■□□□□ 0.07
VPS33B-201ENST00000333371 ANKRD45Q5TZF3 282 aa15.49■□□□□ 0.07
VPS33B-201ENST00000333371 KNDC1Q76NI1 1749 aa15.49■□□□□ 0.07
VPS33B-201ENST00000333371 FAM135BQ49AJ0 1406 aa15.48■□□□□ 0.07
VPS33B-201ENST00000333371 VAMP4O75379 141 aa15.48■□□□□ 0.07
VPS33B-201ENST00000333371 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-201ENST00000333371 NME9Q86XW9 330 aa15.48■□□□□ 0.07
VPS33B-201ENST00000333371 PPIP5K1Q6PFW1 1433 aa15.48■□□□□ 0.07
VPS33B-201ENST00000333371 FAM83GA6ND36 823 aa15.47■□□□□ 0.07
VPS33B-201ENST00000333371 ALDH1L2Q3SY69 923 aa15.47■□□□□ 0.07
VPS33B-201ENST00000333371 ZBTB7BO15156 539 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-201ENST00000333371 HSCBQ8IWL3 235 aa15.47■□□□□ 0.07
VPS33B-201ENST00000333371 PANK2Q9BZ23 570 aa15.47■□□□□ 0.07
VPS33B-201ENST00000333371 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
VPS33B-201ENST00000333371 CHMP5Q9NZZ3 219 aa15.47■□□□□ 0.07
VPS33B-201ENST00000333371 DCTN1Q14203 1278 aa15.47■□□□□ 0.07
VPS33B-201ENST00000333371 DLG5Q8TDM6 1919 aa15.46■□□□□ 0.07
VPS33B-201ENST00000333371 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
VPS33B-201ENST00000333371 NFE2L2Q16236 605 aa15.46■□□□□ 0.07
VPS33B-201ENST00000333371 SIRT2Q8IXJ6 389 aa15.46■□□□□ 0.07
VPS33B-201ENST00000333371 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
VPS33B-201ENST00000333371 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
VPS33B-201ENST00000333371 NUDT16Q96DE0 195 aaKnown RBP15.46■□□□□ 0.06
VPS33B-201ENST00000333371 MBIPQ9NS73 344 aa15.46■□□□□ 0.06
VPS33B-201ENST00000333371 CD2BP2O95400 341 aaKnown RBP15.45■□□□□ 0.06
VPS33B-201ENST00000333371 XRCC6P12956 609 aaKnown RBP eCLIP15.45■□□□□ 0.06
VPS33B-201ENST00000333371 SIRT1Q96EB6 747 aa15.45■□□□□ 0.06
VPS33B-201ENST00000333371 PNNQ9H307 717 aaKnown RBP15.45■□□□□ 0.06
VPS33B-201ENST00000333371 EID1Q9Y6B2 187 aa15.45■□□□□ 0.06
VPS33B-201ENST00000333371 CPS1P31327 1500 aa15.45■□□□□ 0.06
VPS33B-201ENST00000333371 TECPR2O15040 1411 aa15.45■□□□□ 0.06
VPS33B-201ENST00000333371 C8orf58Q8NAV2 365 aa15.45■□□□□ 0.06
VPS33B-201ENST00000333371 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
VPS33B-201ENST00000333371 TRAK2O60296 914 aa15.44■□□□□ 0.06
VPS33B-201ENST00000333371 RRAGDQ9NQL2 400 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-201ENST00000333371 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
VPS33B-201ENST00000333371 C3P01024 1663 aa15.44■□□□□ 0.06
VPS33B-201ENST00000333371 LTKP29376 864 aa15.43■□□□□ 0.06
VPS33B-201ENST00000333371 FAM43AQ8N2R8 423 aa15.43■□□□□ 0.06
VPS33B-201ENST00000333371 CCDC61Q9Y6R9 512 aa15.43■□□□□ 0.06
VPS33B-201ENST00000333371 CDC42BPGQ6DT37 1551 aa15.43■□□□□ 0.06
VPS33B-201ENST00000333371 PLEKHG1Q9ULL1 1385 aa15.43■□□□□ 0.06
VPS33B-201ENST00000333371 AK9Q5TCS8 1911 aa15.43■□□□□ 0.06
VPS33B-201ENST00000333371 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
VPS33B-201ENST00000333371 IL13P35225 146 aa15.42■□□□□ 0.06
VPS33B-201ENST00000333371 RBM25P49756 843 aaKnown RBP15.42■□□□□ 0.06
VPS33B-201ENST00000333371 KIF2CQ99661 725 aa15.42■□□□□ 0.06
VPS33B-201ENST00000333371 ADAMTS13Q76LX8 1427 aa15.42■□□□□ 0.06
VPS33B-201ENST00000333371 GOLGA6L3A6NEY3 463 aa15.41■□□□□ 0.06
VPS33B-201ENST00000333371 EIF5BO60841 1220 aaKnown RBP15.41■□□□□ 0.06
VPS33B-201ENST00000333371 TWISTNBQ3B726 338 aaPredicted RBP15.41■□□□□ 0.06
VPS33B-201ENST00000333371 L1TD1Q5T7N2 865 aaKnown RBP15.41■□□□□ 0.06
VPS33B-201ENST00000333371 KRT24Q2M2I5 525 aa15.41■□□□□ 0.06
VPS33B-201ENST00000333371 TBC1D9Q6ZT07 1266 aa15.41■□□□□ 0.06
VPS33B-201ENST00000333371 SLC26A8Q96RN1 970 aa15.41■□□□□ 0.06
VPS33B-201ENST00000333371 ROBO2Q9HCK4 1378 aa15.41■□□□□ 0.06
VPS33B-201ENST00000333371 CPSF1Q10570 1443 aaKnown RBP15.41■□□□□ 0.06
VPS33B-201ENST00000333371 BMP2KLQ5H9B9 411 aa15.41■□□□□ 0.06
VPS33B-201ENST00000333371 ITSN1Q15811 1721 aa15.4■□□□□ 0.06
VPS33B-201ENST00000333371 HSP90AB1P08238 724 aaKnown RBP15.4■□□□□ 0.06
VPS33B-201ENST00000333371 FSD2A1L4K1 749 aa15.4■□□□□ 0.06
VPS33B-201ENST00000333371 GNAI1P63096 354 aa15.4■□□□□ 0.06
VPS33B-201ENST00000333371 DDIT3P35638 169 aa15.39■□□□□ 0.05
VPS33B-201ENST00000333371 TNPO1Q92973 898 aaKnown RBP15.39■□□□□ 0.05
VPS33B-201ENST00000333371 PTCH1Q13635 1447 aa15.39■□□□□ 0.05
VPS33B-201ENST00000333371 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
VPS33B-201ENST00000333371 BRPF1P55201 1214 aaPredicted RBP15.39■□□□□ 0.05
VPS33B-201ENST00000333371 COG3Q96JB2 828 aa15.39■□□□□ 0.05
VPS33B-201ENST00000333371 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
VPS33B-201ENST00000333371 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
VPS33B-201ENST00000333371 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
VPS33B-201ENST00000333371 ABCC4O15439 1325 aa15.38■□□□□ 0.05
VPS33B-201ENST00000333371 MON2Q7Z3U7 1717 aa15.38■□□□□ 0.05
VPS33B-201ENST00000333371 GCC1Q96CN9 775 aa15.38■□□□□ 0.05
VPS33B-201ENST00000333371 C16orf71Q8IYS4 520 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-201ENST00000333371 NUTM2FA1L443 756 aa15.37■□□□□ 0.05
VPS33B-201ENST00000333371 THEMISQ8N1K5 641 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-201ENST00000333371 AKAP12Q02952 1782 aa15.37■□□□□ 0.05
VPS33B-201ENST00000333371 GSPT1P15170 499 aaKnown RBP15.36■□□□□ 0.05
VPS33B-201ENST00000333371 SNX21Q969T3 373 aa15.36■□□□□ 0.05
VPS33B-201ENST00000333371 PRR36Q9H6K5 1346 aa15.36■□□□□ 0.05
VPS33B-201ENST00000333371 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
VPS33B-201ENST00000333371 APBB1O00213 710 aa15.36■□□□□ 0.05
VPS33B-201ENST00000333371 ARHGAP45Q92619 1136 aa15.36■□□□□ 0.05
VPS33B-201ENST00000333371 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
VPS33B-201ENST00000333371 CFAP44Q96MT7 982 aa15.36■□□□□ 0.05
VPS33B-201ENST00000333371 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.36■□□□□ 0.05
VPS33B-201ENST00000333371 HSP90AA1P07900 732 aaKnown RBP15.36■□□□□ 0.05
VPS33B-201ENST00000333371 OTUD7AQ8TE49 926 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-201ENST00000333371 SLIT1O75093 1534 aa15.35■□□□□ 0.05
VPS33B-201ENST00000333371 AMOTL2Q9Y2J4 779 aa15.35■□□□□ 0.05
VPS33B-201ENST00000333371 CALD1Q05682 793 aaKnown RBP15.34■□□□□ 0.05
VPS33B-201ENST00000333371 SOX12O15370 315 aa15.34■□□□□ 0.05
VPS33B-201ENST00000333371 GAS2L2Q8NHY3 880 aa15.34■□□□□ 0.05
VPS33B-201ENST00000333371 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.05
VPS33B-201ENST00000333371 MCM10Q7L590 875 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms