RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 CAVIN1Q6NZI2 390 aaKnown RBP20.16■□□□□ 0.82
CCDC8-201ENST00000307522 SBNO2Q9Y2G9 1366 aa20.16■□□□□ 0.82
CCDC8-201ENST00000307522 PTPRMP28827 1452 aa20.16■□□□□ 0.82
CCDC8-201ENST00000307522 E9PSI1 815 aa20.16■□□□□ 0.82
CCDC8-201ENST00000307522 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
CCDC8-201ENST00000307522 PRKAR2BP31323 418 aa20.15■□□□□ 0.82
CCDC8-201ENST00000307522 GBP4Q96PP9 640 aa20.15■□□□□ 0.82
CCDC8-201ENST00000307522 DIAPH1O60610 1272 aaKnown RBP20.15■□□□□ 0.82
CCDC8-201ENST00000307522 MAPK8IP2Q13387 824 aaPredicted RBP20.15■□□□□ 0.82
CCDC8-201ENST00000307522 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
CCDC8-201ENST00000307522 PRR36Q9H6K5 1346 aa20.14■□□□□ 0.82
CCDC8-201ENST00000307522 CBX1P83916 185 aa20.14■□□□□ 0.82
CCDC8-201ENST00000307522 PDE3AQ14432 1141 aa20.14■□□□□ 0.82
CCDC8-201ENST00000307522 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.82
CCDC8-201ENST00000307522 VIRMAQ69YN4 1812 aaKnown RBP20.14■□□□□ 0.81
CCDC8-201ENST00000307522 FOXD4L5Q5VV16 416 aaPredicted RBP20.14■□□□□ 0.81
CCDC8-201ENST00000307522 FOXD4L4Q8WXT5 416 aaPredicted RBP20.14■□□□□ 0.81
CCDC8-201ENST00000307522 TRMT2AQ8IZ69 625 aaKnown RBP20.14■□□□□ 0.81
CCDC8-201ENST00000307522 POLKQ9UBT6 870 aa20.14■□□□□ 0.81
CCDC8-201ENST00000307522 RBM27Q9P2N5 1060 aaKnown RBP20.13■□□□□ 0.81
CCDC8-201ENST00000307522 ROBO2Q9HCK4 1378 aa20.13■□□□□ 0.81
CCDC8-201ENST00000307522 RNF214Q8ND24 703 aa20.13■□□□□ 0.81
CCDC8-201ENST00000307522 BBXQ8WY36 941 aaPredicted RBP20.13■□□□□ 0.81
CCDC8-201ENST00000307522 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
CCDC8-201ENST00000307522 RWDD1Q9H446 243 aaPredicted RBP20.12■□□□□ 0.81
CCDC8-201ENST00000307522 EID1Q9Y6B2 187 aa20.12■□□□□ 0.81
CCDC8-201ENST00000307522 MCTP1Q6DN14 999 aa20.12■□□□□ 0.81
CCDC8-201ENST00000307522 LTV1Q96GA3 475 aaPredicted RBP20.12■□□□□ 0.81
CCDC8-201ENST00000307522 EXOSC9Q06265 439 aaKnown RBP20.11■□□□□ 0.81
CCDC8-201ENST00000307522 AK9Q5TCS8 1911 aa20.11■□□□□ 0.81
CCDC8-201ENST00000307522 KIAA1210Q9ULL0 1709 aa20.11■□□□□ 0.81
CCDC8-201ENST00000307522 RARSP54136 660 aaKnown RBP20.1■□□□□ 0.81
CCDC8-201ENST00000307522 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.1■□□□□ 0.81
CCDC8-201ENST00000307522 POLR3AO14802 1390 aaPredicted RBP20.1■□□□□ 0.81
CCDC8-201ENST00000307522 AEBP1Q8IUX7 1158 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 LNPKQ9C0E8 428 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 RBSNQ9H1K0 784 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 ATAD2Q6PL18 1390 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 KIF13AQ9H1H9 1805 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 PDE4CQ08493 712 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 PPIP5K1Q6PFW1 1433 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 ARHGEF28Q8N1W1 1705 aaKnown RBP20.1■□□□□ 0.81
CCDC8-201ENST00000307522 CCDC61Q9Y6R9 512 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 SETBP1Q9Y6X0 1596 aa20.1■□□□□ 0.81
CCDC8-201ENST00000307522 DNTTIP2Q5QJE6 756 aaKnown RBP20.09■□□□□ 0.81
CCDC8-201ENST00000307522 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.09■□□□□ 0.81
CCDC8-201ENST00000307522 TMPOP42166 694 aaKnown RBP20.09■□□□□ 0.81
CCDC8-201ENST00000307522 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.81
CCDC8-201ENST00000307522 FTSJ3Q8IY81 847 aaKnown RBP20.08■□□□□ 0.81
CCDC8-201ENST00000307522 NGDNQ8NEJ9 315 aaKnown RBP20.08■□□□□ 0.81
CCDC8-201ENST00000307522 COG3Q96JB2 828 aa20.08■□□□□ 0.8
CCDC8-201ENST00000307522 GAS2L2Q8NHY3 880 aa20.08■□□□□ 0.8
CCDC8-201ENST00000307522 PPP1R9BQ96SB3 815 aa20.08■□□□□ 0.8
CCDC8-201ENST00000307522 RAB3GAP1Q15042 981 aa20.07■□□□□ 0.8
CCDC8-201ENST00000307522 TMEM2Q9UHN6 1383 aa20.07■□□□□ 0.8
CCDC8-201ENST00000307522 PKP1Q13835 747 aa20.07■□□□□ 0.8
CCDC8-201ENST00000307522 VGLL3A8MV65 326 aa20.06■□□□□ 0.8
CCDC8-201ENST00000307522 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
CCDC8-201ENST00000307522 ACEP12821 1306 aa20.06■□□□□ 0.8
CCDC8-201ENST00000307522 ABCC11Q96J66 1382 aa20.06■□□□□ 0.8
CCDC8-201ENST00000307522 KCNA6P17658 529 aa20.06■□□□□ 0.8
CCDC8-201ENST00000307522 PRIM1P49642 420 aaKnown RBP20.06■□□□□ 0.8
CCDC8-201ENST00000307522 BCL11BQ9C0K0 894 aaPredicted RBP20.06■□□□□ 0.8
CCDC8-201ENST00000307522 SPDYE4A6NLX3 237 aa20.06■□□□□ 0.8
CCDC8-201ENST00000307522 ITPRIPQ8IWB1 547 aa20.05■□□□□ 0.8
CCDC8-201ENST00000307522 C17orf53Q8N3J3 647 aaPredicted RBP20.05■□□□□ 0.8
CCDC8-201ENST00000307522 HSP90AB2PQ58FF8 381 aa20.05■□□□□ 0.8
CCDC8-201ENST00000307522 CD163L1Q9NR16 1453 aa20.05■□□□□ 0.8
CCDC8-201ENST00000307522 ZNF830Q96NB3 372 aaPredicted RBP20.04■□□□□ 0.8
CCDC8-201ENST00000307522 TRIM35Q9UPQ4 493 aa20.04■□□□□ 0.8
CCDC8-201ENST00000307522 SMC4Q9NTJ3 1288 aa20.04■□□□□ 0.8
CCDC8-201ENST00000307522 ZC3H13Q5T200 1668 aaKnown RBP20.04■□□□□ 0.8
CCDC8-201ENST00000307522 SMAP1Q8IYB5 467 aaPredicted RBP20.04■□□□□ 0.8
CCDC8-201ENST00000307522 MIS18AQ9NYP9 233 aa20.04■□□□□ 0.8
CCDC8-201ENST00000307522 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
CCDC8-201ENST00000307522 ZBTB22O15209 634 aa20.03■□□□□ 0.8
CCDC8-201ENST00000307522 CHMP4BQ9H444 224 aaKnown RBP20.03■□□□□ 0.8
CCDC8-201ENST00000307522 DDIT3P35638 169 aa20.03■□□□□ 0.8
CCDC8-201ENST00000307522 FOXD4L6Q3SYB3 417 aaPredicted RBP20.03■□□□□ 0.8
CCDC8-201ENST00000307522 FOXD4L3Q6VB84 417 aaPredicted RBP20.03■□□□□ 0.8
CCDC8-201ENST00000307522 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
CCDC8-201ENST00000307522 BAG4O95429 457 aaKnown RBP20.02■□□□□ 0.79
CCDC8-201ENST00000307522 KRT24Q2M2I5 525 aa20.02■□□□□ 0.79
CCDC8-201ENST00000307522 ZFYVE9O95405 1425 aa20.01■□□□□ 0.79
CCDC8-201ENST00000307522 ZSCAN23Q3MJ62 389 aa20.01■□□□□ 0.79
CCDC8-201ENST00000307522 PTMAP06454 111 aaKnown RBP20.01■□□□□ 0.79
CCDC8-201ENST00000307522 SKOR2Q2VWA4 1001 aaPredicted RBP20.01■□□□□ 0.79
CCDC8-201ENST00000307522 ARHGEF40Q8TER5 1519 aa20.01■□□□□ 0.79
CCDC8-201ENST00000307522 GOLGA6L22H0YM25 854 aa20■□□□□ 0.79
CCDC8-201ENST00000307522 ZSCAN20P17040 1043 aaPredicted RBP20■□□□□ 0.79
CCDC8-201ENST00000307522 SULT6B1Q6IMI4 303 aa20■□□□□ 0.79
CCDC8-201ENST00000307522 PLEKHF1Q96S99 279 aa20■□□□□ 0.79
CCDC8-201ENST00000307522 NEURL4Q96JN8 1562 aa19.99■□□□□ 0.79
CCDC8-201ENST00000307522 PRPF40AO75400 957 aaKnown RBP19.99■□□□□ 0.79
CCDC8-201ENST00000307522 NOL7Q9UMY1 257 aaKnown RBP19.99■□□□□ 0.79
CCDC8-201ENST00000307522 SMC5Q8IY18 1101 aa19.99■□□□□ 0.79
CCDC8-201ENST00000307522 MAP7D2Q96T17 732 aa19.99■□□□□ 0.79
CCDC8-201ENST00000307522 TSPYL6Q8N831 410 aa19.98■□□□□ 0.79
CCDC8-201ENST00000307522 SYCE3A1L190 88 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms