RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CCDC85AQ96PX6 553 aaPredicted RBP12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 DHX29Q7Z478 1369 aaKnown RBP12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 SYCP2Q9BX26 1530 aa12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 NME9Q86XW9 330 aa12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 TPM2P07951 284 aa12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 ATP10BO94823 1461 aa12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 ADGRF5Q8IZF2 1346 aa12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 A2MP01023 1474 aa12.97□□□□□ -0.33
SYNPO2-201ENST00000307142 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
SYNPO2-201ENST00000307142 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.96□□□□□ -0.33
SYNPO2-201ENST00000307142 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
SYNPO2-201ENST00000307142 UHRF1BP1LA0JNW5 1464 aa12.96□□□□□ -0.33
SYNPO2-201ENST00000307142 SART3Q15020 963 aaKnown RBP12.96□□□□□ -0.34
SYNPO2-201ENST00000307142 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.34
SYNPO2-201ENST00000307142 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.34
SYNPO2-201ENST00000307142 PLCH2O75038 1416 aa12.95□□□□□ -0.34
SYNPO2-201ENST00000307142 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
SYNPO2-201ENST00000307142 SAFBQ15424 915 aaKnown RBP eCLIP12.95□□□□□ -0.34
SYNPO2-201ENST00000307142 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
SYNPO2-201ENST00000307142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
SYNPO2-201ENST00000307142 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
SYNPO2-201ENST00000307142 BRMS1Q9HCU9 246 aa12.95□□□□□ -0.34
SYNPO2-201ENST00000307142 CCT4P50991 539 aaKnown RBP12.94□□□□□ -0.34
SYNPO2-201ENST00000307142 DUOX2Q9NRD8 1548 aa12.94□□□□□ -0.34
SYNPO2-201ENST00000307142 TMEM132AQ24JP5 1023 aa12.94□□□□□ -0.34
SYNPO2-201ENST00000307142 NAIPQ13075 1403 aa12.94□□□□□ -0.34
SYNPO2-201ENST00000307142 FKBP4Q02790 459 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 SRCIN1Q9C0H9 1055 aa12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 WDR62O43379 1518 aa12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 TTLL12Q14166 644 aaPredicted RBP12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 MCM10Q7L590 875 aa12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 ACSBG1Q96GR2 724 aa12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 XBP1P17861 261 aa12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 RFC4P35249 363 aa12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 TSR1Q2NL82 804 aaKnown RBP12.93□□□□□ -0.34
SYNPO2-201ENST00000307142 PCMTD1Q96MG8 357 aaPredicted RBP12.92□□□□□ -0.34
SYNPO2-201ENST00000307142 FCHSD2O94868 740 aa12.92□□□□□ -0.34
SYNPO2-201ENST00000307142 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
SYNPO2-201ENST00000307142 TMOD2Q9NZR1 351 aa12.92□□□□□ -0.34
SYNPO2-201ENST00000307142 NPHP3Q7Z494 1330 aa12.92□□□□□ -0.34
SYNPO2-201ENST00000307142 GPATCH8Q9UKJ3 1502 aaKnown RBP12.91□□□□□ -0.34
SYNPO2-201ENST00000307142 R3HCC1Q9Y3T6 440 aaKnown RBP12.91□□□□□ -0.34
SYNPO2-201ENST00000307142 RIMS2Q9UQ26 1411 aa12.91□□□□□ -0.34
SYNPO2-201ENST00000307142 NFE2L2Q16236 605 aa12.91□□□□□ -0.34
SYNPO2-201ENST00000307142 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
SYNPO2-201ENST00000307142 ACEP12821 1306 aa12.9□□□□□ -0.34
SYNPO2-201ENST00000307142 GLIPR1L2Q4G1C9 344 aa12.9□□□□□ -0.34
SYNPO2-201ENST00000307142 RAI14Q9P0K7 980 aa12.9□□□□□ -0.34
SYNPO2-201ENST00000307142 WWC2Q6AWC2 1192 aa12.9□□□□□ -0.34
SYNPO2-201ENST00000307142 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
SYNPO2-201ENST00000307142 UHRF1BP1Q6BDS2 1440 aa12.9□□□□□ -0.35
SYNPO2-201ENST00000307142 DCTN1Q14203 1278 aa12.9□□□□□ -0.35
SYNPO2-201ENST00000307142 ZNF622Q969S3 477 aaKnown RBP eCLIP12.9□□□□□ -0.35
SYNPO2-201ENST00000307142 HIP1O00291 1037 aa12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 MPHOSPH10O00566 681 aaKnown RBP12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 HOOK1Q9UJC3 728 aaKnown RBP12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 PSMA5P28066 241 aa12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 MYD88Q99836 296 aa12.89□□□□□ -0.35
SYNPO2-201ENST00000307142 METTL24Q5JXM2 366 aa12.88□□□□□ -0.35
SYNPO2-201ENST00000307142 CDCA7LQ96GN5 454 aa12.88□□□□□ -0.35
SYNPO2-201ENST00000307142 SMC3Q9UQE7 1217 aa12.88□□□□□ -0.35
SYNPO2-201ENST00000307142 VPS37CA5D8V6 355 aaPredicted RBP12.88□□□□□ -0.35
SYNPO2-201ENST00000307142 CEP126Q9P2H0 1117 aa12.88□□□□□ -0.35
SYNPO2-201ENST00000307142 RBM19Q9Y4C8 960 aaKnown RBP12.88□□□□□ -0.35
SYNPO2-201ENST00000307142 ZSCAN25Q6NSZ9 544 aa12.88□□□□□ -0.35
SYNPO2-201ENST00000307142 GOLGA6L19H0YKK7 550 aa12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 TPM3P06753 285 aa12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 AACSQ86V21 672 aa12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
SYNPO2-201ENST00000307142 ST5P78524 1137 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 DUSP27Q5VZP5 1158 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 GPTP24298 496 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 LRRCC1Q9C099 1032 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 SRGAP3O43295 1099 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 ABCC10Q5T3U5 1492 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 HSP90AB3PQ58FF7 597 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 TPM1P09493 284 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms