RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 COG3Q96JB2 828 aa19.03■□□□□ 0.64
CSDC2-201ENST00000306149 GNAI1P63096 354 aa19.02■□□□□ 0.64
CSDC2-201ENST00000306149 TWISTNBQ3B726 338 aaPredicted RBP19.02■□□□□ 0.63
CSDC2-201ENST00000306149 CPSF1Q10570 1443 aaKnown RBP19.01■□□□□ 0.63
CSDC2-201ENST00000306149 IFT57Q9NWB7 429 aa19■□□□□ 0.63
CSDC2-201ENST00000306149 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
CSDC2-201ENST00000306149 ARXQ96QS3 562 aa19■□□□□ 0.63
CSDC2-201ENST00000306149 CCDC61Q9Y6R9 512 aa19■□□□□ 0.63
CSDC2-201ENST00000306149 SIRT2Q8IXJ6 389 aa18.99■□□□□ 0.63
CSDC2-201ENST00000306149 CPS1P31327 1500 aa18.99■□□□□ 0.63
CSDC2-201ENST00000306149 DLC1Q96QB1 1528 aa18.99■□□□□ 0.63
CSDC2-201ENST00000306149 ZNF853P0CG23 659 aa18.99■□□□□ 0.63
CSDC2-201ENST00000306149 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
CSDC2-201ENST00000306149 RIMBP3CA6NJZ7 1639 aa18.98■□□□□ 0.63
CSDC2-201ENST00000306149 RIMBP3BA6NNM3 1639 aa18.98■□□□□ 0.63
CSDC2-201ENST00000306149 RIMBP3Q9UFD9 1639 aa18.98■□□□□ 0.63
CSDC2-201ENST00000306149 BRPF1P55201 1214 aaPredicted RBP18.98■□□□□ 0.63
CSDC2-201ENST00000306149 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
CSDC2-201ENST00000306149 ZNF428Q96B54 188 aa18.98■□□□□ 0.63
CSDC2-201ENST00000306149 SOX12O15370 315 aa18.98■□□□□ 0.63
CSDC2-201ENST00000306149 KRT24Q2M2I5 525 aa18.98■□□□□ 0.63
CSDC2-201ENST00000306149 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
CSDC2-201ENST00000306149 SETD1AO15047 1707 aaKnown RBP18.97■□□□□ 0.63
CSDC2-201ENST00000306149 CFAP44Q96MT7 982 aa18.97■□□□□ 0.63
CSDC2-201ENST00000306149 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
CSDC2-201ENST00000306149 PRR36Q9H6K5 1346 aa18.97■□□□□ 0.63
CSDC2-201ENST00000306149 SPATA31D1Q6ZQQ2 1576 aa18.96■□□□□ 0.63
CSDC2-201ENST00000306149 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
CSDC2-201ENST00000306149 GZF1Q9H116 711 aaPredicted RBP18.95■□□□□ 0.62
CSDC2-201ENST00000306149 SULT6B1Q6IMI4 303 aa18.95■□□□□ 0.62
CSDC2-201ENST00000306149 DIP2BQ9P265 1576 aa18.95■□□□□ 0.62
CSDC2-201ENST00000306149 HSCBQ8IWL3 235 aa18.94■□□□□ 0.62
CSDC2-201ENST00000306149 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.94■□□□□ 0.62
CSDC2-201ENST00000306149 NRXN3Q9Y4C0 1643 aa18.94■□□□□ 0.62
CSDC2-201ENST00000306149 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
CSDC2-201ENST00000306149 ABCC4O15439 1325 aa18.94■□□□□ 0.62
CSDC2-201ENST00000306149 MCM4P33991 863 aa18.93■□□□□ 0.62
CSDC2-201ENST00000306149 GCC1Q96CN9 775 aa18.93■□□□□ 0.62
CSDC2-201ENST00000306149 DLG5Q8TDM6 1919 aa18.93■□□□□ 0.62
CSDC2-201ENST00000306149 PTCH1Q13635 1447 aa18.93■□□□□ 0.62
CSDC2-201ENST00000306149 AGLP35573 1532 aa18.93■□□□□ 0.62
CSDC2-201ENST00000306149 MCM10Q7L590 875 aa18.93■□□□□ 0.62
CSDC2-201ENST00000306149 FAM43AQ8N2R8 423 aa18.93■□□□□ 0.62
CSDC2-201ENST00000306149 CHMP5Q9NZZ3 219 aa18.93■□□□□ 0.62
CSDC2-201ENST00000306149 AATKQ6ZMQ8 1374 aa18.92■□□□□ 0.62
CSDC2-201ENST00000306149 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
CSDC2-201ENST00000306149 BMP2KLQ5H9B9 411 aa18.92■□□□□ 0.62
CSDC2-201ENST00000306149 L1TD1Q5T7N2 865 aaKnown RBP18.92■□□□□ 0.62
CSDC2-201ENST00000306149 LMOD3Q0VAK6 560 aa18.92■□□□□ 0.62
CSDC2-201ENST00000306149 PIK3R4Q99570 1358 aa18.91■□□□□ 0.62
CSDC2-201ENST00000306149 RBM25P49756 843 aaKnown RBP18.91■□□□□ 0.62
CSDC2-201ENST00000306149 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
CSDC2-201ENST00000306149 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
CSDC2-201ENST00000306149 TBC1D9Q6ZT07 1266 aa18.9■□□□□ 0.62
CSDC2-201ENST00000306149 FOXD4L1Q9NU39 408 aa18.9■□□□□ 0.62
CSDC2-201ENST00000306149 ROBO2Q9HCK4 1378 aa18.9■□□□□ 0.62
CSDC2-201ENST00000306149 RBM42Q9BTD8 480 aaKnown RBP18.89■□□□□ 0.62
CSDC2-201ENST00000306149 API5Q9BZZ5 524 aaKnown RBP18.89■□□□□ 0.62
CSDC2-201ENST00000306149 ZNF692Q9BU19 519 aaPredicted RBP18.88■□□□□ 0.61
CSDC2-201ENST00000306149 CHMP4BQ9H444 224 aaKnown RBP18.88■□□□□ 0.61
CSDC2-201ENST00000306149 ACEP12821 1306 aa18.88■□□□□ 0.61
CSDC2-201ENST00000306149 CD2BP2O95400 341 aaKnown RBP18.88■□□□□ 0.61
CSDC2-201ENST00000306149 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
CSDC2-201ENST00000306149 REREQ9P2R6 1566 aa18.88■□□□□ 0.61
CSDC2-201ENST00000306149 C16orf71Q8IYS4 520 aaPredicted RBP18.87■□□□□ 0.61
CSDC2-201ENST00000306149 KIF2CQ99661 725 aa18.87■□□□□ 0.61
CSDC2-201ENST00000306149 TTC21BQ7Z4L5 1316 aa18.87■□□□□ 0.61
CSDC2-201ENST00000306149 APBB1O00213 710 aa18.87■□□□□ 0.61
CSDC2-201ENST00000306149 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
CSDC2-201ENST00000306149 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.87■□□□□ 0.61
CSDC2-201ENST00000306149 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
CSDC2-201ENST00000306149 HDGFP51858 240 aaKnown RBP18.86■□□□□ 0.61
CSDC2-201ENST00000306149 SLC26A8Q96RN1 970 aa18.86■□□□□ 0.61
CSDC2-201ENST00000306149 TRAK2O60296 914 aa18.85■□□□□ 0.61
CSDC2-201ENST00000306149 GSPT1P15170 499 aaKnown RBP18.85■□□□□ 0.61
CSDC2-201ENST00000306149 FOXO3O43524 673 aa18.84■□□□□ 0.61
CSDC2-201ENST00000306149 LTKP29376 864 aa18.84■□□□□ 0.61
CSDC2-201ENST00000306149 OTUD7AQ8TE49 926 aaPredicted RBP18.84■□□□□ 0.61
CSDC2-201ENST00000306149 MON2Q7Z3U7 1717 aa18.84■□□□□ 0.61
CSDC2-201ENST00000306149 TNRQ92752 1358 aa18.83■□□□□ 0.61
CSDC2-201ENST00000306149 FSD2A1L4K1 749 aa18.83■□□□□ 0.6
CSDC2-201ENST00000306149 PLEKHM2Q8IWE5 1019 aa18.83■□□□□ 0.6
CSDC2-201ENST00000306149 SNX21Q969T3 373 aa18.83■□□□□ 0.6
CSDC2-201ENST00000306149 SIRT1Q96EB6 747 aa18.83■□□□□ 0.6
CSDC2-201ENST00000306149 CHL1O00533 1208 aa18.82■□□□□ 0.6
CSDC2-201ENST00000306149 C3P01024 1663 aa18.82■□□□□ 0.6
CSDC2-201ENST00000306149 SMARCA5O60264 1052 aaPredicted RBP18.82■□□□□ 0.6
CSDC2-201ENST00000306149 TMEM2Q9UHN6 1383 aa18.82■□□□□ 0.6
CSDC2-201ENST00000306149 HSP90AA1P07900 732 aaKnown RBP18.81■□□□□ 0.6
CSDC2-201ENST00000306149 DDIT3P35638 169 aa18.81■□□□□ 0.6
CSDC2-201ENST00000306149 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
CSDC2-201ENST00000306149 DCTPP1Q9H773 170 aa18.81■□□□□ 0.6
CSDC2-201ENST00000306149 TECPR2O15040 1411 aa18.81■□□□□ 0.6
CSDC2-201ENST00000306149 KNDC1Q76NI1 1749 aa18.81■□□□□ 0.6
CSDC2-201ENST00000306149 INTS3Q68E01 1043 aaKnown RBP18.81■□□□□ 0.6
CSDC2-201ENST00000306149 TNPO1Q92973 898 aaKnown RBP18.8■□□□□ 0.6
CSDC2-201ENST00000306149 MEIS3Q99687 375 aa18.8■□□□□ 0.6
CSDC2-201ENST00000306149 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
CSDC2-201ENST00000306149 CDC45O75419 566 aa18.8■□□□□ 0.6
CSDC2-201ENST00000306149 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms