RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 IL16Q14005 1332 aa23.3■■□□□ 1.32
TRABD-201ENST00000303434 PDIA4P13667 645 aaKnown RBP23.3■■□□□ 1.32
TRABD-201ENST00000303434 DZIP1LQ8IYY4 767 aaKnown RBP23.3■■□□□ 1.32
TRABD-201ENST00000303434 PPP1R9BQ96SB3 815 aa23.3■■□□□ 1.32
TRABD-201ENST00000303434 SPATA31D1Q6ZQQ2 1576 aa23.29■■□□□ 1.32
TRABD-201ENST00000303434 RWDD1Q9H446 243 aaPredicted RBP23.29■■□□□ 1.32
TRABD-201ENST00000303434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.28■■□□□ 1.32
TRABD-201ENST00000303434 FTSJ3Q8IY81 847 aaKnown RBP23.28■■□□□ 1.32
TRABD-201ENST00000303434 SMC4Q9NTJ3 1288 aa23.28■■□□□ 1.32
TRABD-201ENST00000303434 DMTNQ08495 405 aa23.27■■□□□ 1.32
TRABD-201ENST00000303434 MLECQ14165 292 aa23.27■■□□□ 1.32
TRABD-201ENST00000303434 BBXQ8WY36 941 aaPredicted RBP23.27■■□□□ 1.32
TRABD-201ENST00000303434 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
TRABD-201ENST00000303434 MSNP26038 577 aaKnown RBP23.26■■□□□ 1.31
TRABD-201ENST00000303434 SSH1Q8WYL5 1049 aa23.26■■□□□ 1.31
TRABD-201ENST00000303434 BCL11BQ9C0K0 894 aaPredicted RBP23.26■■□□□ 1.31
TRABD-201ENST00000303434 ZHX1Q9UKY1 873 aaPredicted RBP23.26■■□□□ 1.31
TRABD-201ENST00000303434 FCHSD2O94868 740 aa23.26■■□□□ 1.31
TRABD-201ENST00000303434 PDZRN3Q9UPQ7 1066 aa23.26■■□□□ 1.31
TRABD-201ENST00000303434 POLKQ9UBT6 870 aa23.25■■□□□ 1.31
TRABD-201ENST00000303434 ATP7BP35670 1465 aa23.25■■□□□ 1.31
TRABD-201ENST00000303434 FBLN1P23142 703 aa23.25■■□□□ 1.31
TRABD-201ENST00000303434 GAS2L3Q86XJ1 694 aa23.24■■□□□ 1.31
TRABD-201ENST00000303434 ZMYM3Q14202 1370 aa23.24■■□□□ 1.31
TRABD-201ENST00000303434 TRIM27P14373 513 aa23.24■■□□□ 1.31
TRABD-201ENST00000303434 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
TRABD-201ENST00000303434 DYNC1I1O14576 645 aa23.22■■□□□ 1.31
TRABD-201ENST00000303434 CDC42BPGQ6DT37 1551 aa23.22■■□□□ 1.31
TRABD-201ENST00000303434 ATF7IPQ6VMQ6 1270 aa23.21■■□□□ 1.31
TRABD-201ENST00000303434 R3HCC1Q9Y3T6 440 aaKnown RBP23.21■■□□□ 1.31
TRABD-201ENST00000303434 GTF2E1P29083 439 aaPredicted RBP23.21■■□□□ 1.31
TRABD-201ENST00000303434 NOB1Q9ULX3 412 aaKnown RBP23.21■■□□□ 1.31
TRABD-201ENST00000303434 SKOR2Q2VWA4 1001 aaPredicted RBP23.2■■□□□ 1.3
TRABD-201ENST00000303434 SPRYD3Q8NCJ5 442 aa23.2■■□□□ 1.3
TRABD-201ENST00000303434 WASLO00401 505 aaPredicted RBP23.2■■□□□ 1.3
TRABD-201ENST00000303434 PRKAR2BP31323 418 aa23.2■■□□□ 1.3
TRABD-201ENST00000303434 LRRC7Q96NW7 1537 aa23.19■■□□□ 1.3
TRABD-201ENST00000303434 ANP32BQ92688 251 aaKnown RBP23.19■■□□□ 1.3
TRABD-201ENST00000303434 UQCRHLA0A096LP55 91 aa23.19■■□□□ 1.3
TRABD-201ENST00000303434 UQCRHP07919 91 aa23.19■■□□□ 1.3
TRABD-201ENST00000303434 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRABD-201ENST00000303434 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
TRABD-201ENST00000303434 NRXN3Q9Y4C0 1643 aa23.18■■□□□ 1.3
TRABD-201ENST00000303434 HS1BP3Q53T59 392 aa23.18■■□□□ 1.3
TRABD-201ENST00000303434 PTMSP20962 102 aa23.17■■□□□ 1.3
TRABD-201ENST00000303434 CPSF1Q10570 1443 aaKnown RBP23.17■■□□□ 1.3
TRABD-201ENST00000303434 FAM135BQ49AJ0 1406 aa23.17■■□□□ 1.3
TRABD-201ENST00000303434 METP08581 1390 aa23.17■■□□□ 1.3
TRABD-201ENST00000303434 ITPRIPQ8IWB1 547 aa23.17■■□□□ 1.3
TRABD-201ENST00000303434 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
TRABD-201ENST00000303434 TXNDC2Q86VQ3 553 aa23.16■■□□□ 1.3
TRABD-201ENST00000303434 CCDC94Q9BW85 323 aaPredicted RBP23.16■■□□□ 1.3
TRABD-201ENST00000303434 EDC4Q6P2E9 1401 aaKnown RBP23.15■■□□□ 1.3
TRABD-201ENST00000303434 ZNF500O60304 480 aaPredicted RBP23.15■■□□□ 1.3
TRABD-201ENST00000303434 ZSCAN20P17040 1043 aaPredicted RBP23.15■■□□□ 1.3
TRABD-201ENST00000303434 PRDM10Q9NQV6 1147 aa23.15■■□□□ 1.3
TRABD-201ENST00000303434 HDAC1Q13547 482 aaPredicted RBP23.15■■□□□ 1.3
TRABD-201ENST00000303434 PHACTR3Q96KR7 559 aa23.15■■□□□ 1.3
TRABD-201ENST00000303434 IPO8O15397 1037 aaKnown RBP23.14■■□□□ 1.3
TRABD-201ENST00000303434 HMOX1P09601 288 aa23.14■■□□□ 1.3
TRABD-201ENST00000303434 NASPP49321 788 aaPredicted RBP23.14■■□□□ 1.3
TRABD-201ENST00000303434 ALDH1L2Q3SY69 923 aa23.14■■□□□ 1.3
TRABD-201ENST00000303434 NME9Q86XW9 330 aa23.14■■□□□ 1.3
TRABD-201ENST00000303434 NAP1L2Q9ULW6 460 aaPredicted RBP23.14■■□□□ 1.3
TRABD-201ENST00000303434 EMILIN1Q9Y6C2 1016 aa23.14■■□□□ 1.3
TRABD-201ENST00000303434 KIF16BQ96L93 1317 aa23.14■■□□□ 1.29
TRABD-201ENST00000303434 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.29
TRABD-201ENST00000303434 ZNF692Q9BU19 519 aaPredicted RBP23.14■■□□□ 1.29
TRABD-201ENST00000303434 ESF1Q9H501 851 aaKnown RBP23.14■■□□□ 1.29
TRABD-201ENST00000303434 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
TRABD-201ENST00000303434 NUDT16Q96DE0 195 aaKnown RBP23.13■■□□□ 1.29
TRABD-201ENST00000303434 KIF20AO95235 890 aa23.13■■□□□ 1.29
TRABD-201ENST00000303434 IL13P35225 146 aa23.12■■□□□ 1.29
TRABD-201ENST00000303434 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
TRABD-201ENST00000303434 GTPBP4Q9BZE4 634 aaKnown RBP23.11■■□□□ 1.29
TRABD-201ENST00000303434 SIRT1Q96EB6 747 aa23.11■■□□□ 1.29
TRABD-201ENST00000303434 ZBTB40Q9NUA8 1239 aa23.11■■□□□ 1.29
TRABD-201ENST00000303434 HDGFP51858 240 aaKnown RBP23.1■■□□□ 1.29
TRABD-201ENST00000303434 CSPP1Q1MSJ5 1256 aa23.1■■□□□ 1.29
TRABD-201ENST00000303434 CCDC61Q9Y6R9 512 aa23.1■■□□□ 1.29
TRABD-201ENST00000303434 PPP4R3BQ5MIZ7 849 aa23.1■■□□□ 1.29
TRABD-201ENST00000303434 GBP4Q96PP9 640 aa23.1■■□□□ 1.29
TRABD-201ENST00000303434 NOL7Q9UMY1 257 aaKnown RBP23.1■■□□□ 1.29
TRABD-201ENST00000303434 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
TRABD-201ENST00000303434 AATKQ6ZMQ8 1374 aa23.09■■□□□ 1.29
TRABD-201ENST00000303434 DDIT3P35638 169 aa23.09■■□□□ 1.29
TRABD-201ENST00000303434 ZNF428Q96B54 188 aa23.09■■□□□ 1.29
TRABD-201ENST00000303434 BRPF1P55201 1214 aaPredicted RBP23.08■■□□□ 1.28
TRABD-201ENST00000303434 COG3Q96JB2 828 aa23.08■■□□□ 1.28
TRABD-201ENST00000303434 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.28
TRABD-201ENST00000303434 KNDC1Q76NI1 1749 aa23.07■■□□□ 1.28
TRABD-201ENST00000303434 CDK12Q9NYV4 1490 aaPredicted RBP23.07■■□□□ 1.28
TRABD-201ENST00000303434 THUMPD2Q9BTF0 503 aaKnown RBP23.07■■□□□ 1.28
TRABD-201ENST00000303434 TECPR2O15040 1411 aa23.07■■□□□ 1.28
TRABD-201ENST00000303434 SMC5Q8IY18 1101 aa23.07■■□□□ 1.28
TRABD-201ENST00000303434 IBTKQ9P2D0 1353 aaPredicted RBP23.06■■□□□ 1.28
TRABD-201ENST00000303434 CIZ1Q9ULV3 898 aaPredicted RBP23.06■■□□□ 1.28
TRABD-201ENST00000303434 CPS1P31327 1500 aa23.06■■□□□ 1.28
TRABD-201ENST00000303434 MON2Q7Z3U7 1717 aa23.06■■□□□ 1.28
TRABD-201ENST00000303434 VAMP4O75379 141 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms