RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 CWC22Q9HCG8 908 aaKnown RBP17.13■□□□□ 0.33
KARS-201ENST00000302445 ARHGAP45Q92619 1136 aa17.12■□□□□ 0.33
KARS-201ENST00000302445 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
KARS-201ENST00000302445 CDC45O75419 566 aa17.11■□□□□ 0.33
KARS-201ENST00000302445 TBC1D9Q6ZT07 1266 aa17.11■□□□□ 0.33
KARS-201ENST00000302445 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
KARS-201ENST00000302445 GLI2P10070 1586 aa17.11■□□□□ 0.33
KARS-201ENST00000302445 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
KARS-201ENST00000302445 CHD1O14646 1710 aa17.11■□□□□ 0.33
KARS-201ENST00000302445 GAS2L2Q8NHY3 880 aa17.11■□□□□ 0.33
KARS-201ENST00000302445 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
KARS-201ENST00000302445 C14orf93Q9H972 538 aaKnown RBP17.11■□□□□ 0.33
KARS-201ENST00000302445 CD2BP2O95400 341 aaKnown RBP17.1■□□□□ 0.33
KARS-201ENST00000302445 ZSCAN23Q3MJ62 389 aa17.1■□□□□ 0.33
KARS-201ENST00000302445 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
KARS-201ENST00000302445 ZKSCAN5Q9Y2L8 839 aa17.1■□□□□ 0.33
KARS-201ENST00000302445 KIF24Q5T7B8 1368 aa17.08■□□□□ 0.33
KARS-201ENST00000302445 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.33
KARS-201ENST00000302445 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.33
KARS-201ENST00000302445 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
KARS-201ENST00000302445 CCDC39Q9UFE4 941 aa17.08■□□□□ 0.32
KARS-201ENST00000302445 PRDM4Q9UKN5 801 aa17.08■□□□□ 0.32
KARS-201ENST00000302445 EVC2Q86UK5 1308 aa17.07■□□□□ 0.32
KARS-201ENST00000302445 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
KARS-201ENST00000302445 ASXL2Q76L83 1435 aa17.07■□□□□ 0.32
KARS-201ENST00000302445 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
KARS-201ENST00000302445 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
KARS-201ENST00000302445 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
KARS-201ENST00000302445 SASS6Q6UVJ0 657 aa17.06■□□□□ 0.32
KARS-201ENST00000302445 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.06■□□□□ 0.32
KARS-201ENST00000302445 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
KARS-201ENST00000302445 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
KARS-201ENST00000302445 AK9Q5TCS8 1911 aa17.05■□□□□ 0.32
KARS-201ENST00000302445 UQCRHLA0A096LP55 91 aa17.05■□□□□ 0.32
KARS-201ENST00000302445 UQCRHP07919 91 aa17.05■□□□□ 0.32
KARS-201ENST00000302445 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
KARS-201ENST00000302445 ZFYVE9O95405 1425 aa17.05■□□□□ 0.32
KARS-201ENST00000302445 CAVIN1Q6NZI2 390 aaKnown RBP17.04■□□□□ 0.32
KARS-201ENST00000302445 LRSAM1Q6UWE0 723 aa17.04■□□□□ 0.32
KARS-201ENST00000302445 RBSNQ9H1K0 784 aa17.04■□□□□ 0.32
KARS-201ENST00000302445 PNPLA6Q8IY17 1366 aa17.04■□□□□ 0.32
KARS-201ENST00000302445 MCTP1Q6DN14 999 aa17.03■□□□□ 0.32
KARS-201ENST00000302445 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
KARS-201ENST00000302445 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
KARS-201ENST00000302445 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
KARS-201ENST00000302445 MBD3O95983 291 aa17.03■□□□□ 0.32
KARS-201ENST00000302445 ABCC4O15439 1325 aa17.02■□□□□ 0.32
KARS-201ENST00000302445 KIF20BQ96Q89 1820 aa17.02■□□□□ 0.32
KARS-201ENST00000302445 PIK3C2BO00750 1634 aa17.02■□□□□ 0.32
KARS-201ENST00000302445 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
KARS-201ENST00000302445 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
KARS-201ENST00000302445 ST18O60284 1047 aa17.01■□□□□ 0.31
KARS-201ENST00000302445 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
KARS-201ENST00000302445 FAM13BQ9NYF5 915 aa17.01■□□□□ 0.31
KARS-201ENST00000302445 KIF3BO15066 747 aa17■□□□□ 0.31
KARS-201ENST00000302445 FAM135BQ49AJ0 1406 aa17■□□□□ 0.31
KARS-201ENST00000302445 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
KARS-201ENST00000302445 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
KARS-201ENST00000302445 INTS3Q68E01 1043 aaKnown RBP16.99■□□□□ 0.31
KARS-201ENST00000302445 AFAP1Q8N556 730 aa16.99■□□□□ 0.31
KARS-201ENST00000302445 RBM10P98175 930 aaKnown RBP16.99■□□□□ 0.31
KARS-201ENST00000302445 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
KARS-201ENST00000302445 KIDINS220Q9ULH0 1771 aa16.99■□□□□ 0.31
KARS-201ENST00000302445 USP26Q9BXU7 913 aa16.98■□□□□ 0.31
KARS-201ENST00000302445 CAMSAP1Q5T5Y3 1602 aa16.98■□□□□ 0.31
KARS-201ENST00000302445 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
KARS-201ENST00000302445 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
KARS-201ENST00000302445 FCHSD2O94868 740 aa16.97■□□□□ 0.31
KARS-201ENST00000302445 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
KARS-201ENST00000302445 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
KARS-201ENST00000302445 MRPL50Q8N5N7 158 aaKnown RBP16.97■□□□□ 0.31
KARS-201ENST00000302445 HECW2Q9P2P5 1572 aa16.97■□□□□ 0.31
KARS-201ENST00000302445 KNDC1Q76NI1 1749 aa16.97■□□□□ 0.31
KARS-201ENST00000302445 ATAD2Q6PL18 1390 aa16.97■□□□□ 0.31
KARS-201ENST00000302445 CASC1Q6TDU7 716 aa16.97■□□□□ 0.31
KARS-201ENST00000302445 GPT2Q8TD30 523 aa16.97■□□□□ 0.31
KARS-201ENST00000302445 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
KARS-201ENST00000302445 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
KARS-201ENST00000302445 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
KARS-201ENST00000302445 NCLP19338 710 aaKnown RBP16.96■□□□□ 0.3
KARS-201ENST00000302445 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.3
KARS-201ENST00000302445 CCDC94Q9BW85 323 aaPredicted RBP16.96■□□□□ 0.3
KARS-201ENST00000302445 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
KARS-201ENST00000302445 HMGN5P82970 282 aaKnown RBP16.95■□□□□ 0.3
KARS-201ENST00000302445 KIAA2012Q0VF49 1180 aa16.95■□□□□ 0.3
KARS-201ENST00000302445 SIRT2Q8IXJ6 389 aa16.95■□□□□ 0.3
KARS-201ENST00000302445 SYAP1Q96A49 352 aaPredicted RBP16.95■□□□□ 0.3
KARS-201ENST00000302445 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
KARS-201ENST00000302445 NEXMIFQ5QGS0 1516 aa16.95■□□□□ 0.3
KARS-201ENST00000302445 MCM2P49736 904 aa16.94■□□□□ 0.3
KARS-201ENST00000302445 MYRIPQ8NFW9 859 aa16.94■□□□□ 0.3
KARS-201ENST00000302445 DCTPP1Q9H773 170 aa16.94■□□□□ 0.3
KARS-201ENST00000302445 REC8O95072 547 aa16.94■□□□□ 0.3
KARS-201ENST00000302445 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.3
KARS-201ENST00000302445 VAMP4O75379 141 aa16.93■□□□□ 0.3
KARS-201ENST00000302445 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
KARS-201ENST00000302445 PHF14O94880 888 aa16.93■□□□□ 0.3
KARS-201ENST00000302445 FAM184AQ8NB25 1140 aa16.93■□□□□ 0.3
KARS-201ENST00000302445 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
KARS-201ENST00000302445 NPATQ14207 1427 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms