RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 FER1L4A9Z1Z3 1794 aa19.79■□□□□ 0.76
CACNB3-201ENST00000301050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
CACNB3-201ENST00000301050 WASLO00401 505 aaPredicted RBP19.79■□□□□ 0.76
CACNB3-201ENST00000301050 KIF20BQ96Q89 1820 aa19.78■□□□□ 0.76
CACNB3-201ENST00000301050 RAB3GAP1Q15042 981 aa19.78■□□□□ 0.76
CACNB3-201ENST00000301050 RUNDC1Q96C34 613 aa19.78■□□□□ 0.76
CACNB3-201ENST00000301050 ADAMTS13Q76LX8 1427 aa19.78■□□□□ 0.76
CACNB3-201ENST00000301050 SMC5Q8IY18 1101 aa19.78■□□□□ 0.76
CACNB3-201ENST00000301050 SMAP1Q8IYB5 467 aaPredicted RBP19.78■□□□□ 0.76
CACNB3-201ENST00000301050 CIZ1Q9ULV3 898 aaPredicted RBP19.78■□□□□ 0.76
CACNB3-201ENST00000301050 NCKAP5LQ9HCH0 1330 aa19.77■□□□□ 0.76
CACNB3-201ENST00000301050 RARSP54136 660 aaKnown RBP19.77■□□□□ 0.75
CACNB3-201ENST00000301050 CPS1P31327 1500 aa19.77■□□□□ 0.75
CACNB3-201ENST00000301050 U2AF1L5P0DN76 240 aaPredicted RBP19.76■□□□□ 0.75
CACNB3-201ENST00000301050 U2AF1Q01081 240 aaKnown RBP eCLIP19.76■□□□□ 0.75
CACNB3-201ENST00000301050 ANP32BQ92688 251 aaKnown RBP19.76■□□□□ 0.75
CACNB3-201ENST00000301050 IQSEC2Q5JU85 1478 aa19.76■□□□□ 0.75
CACNB3-201ENST00000301050 TECPR2O15040 1411 aa19.76■□□□□ 0.75
CACNB3-201ENST00000301050 PPIP5K1Q6PFW1 1433 aa19.76■□□□□ 0.75
CACNB3-201ENST00000301050 PTMSP20962 102 aa19.76■□□□□ 0.75
CACNB3-201ENST00000301050 TCP11L2Q8N4U5 519 aa19.76■□□□□ 0.75
CACNB3-201ENST00000301050 WWC1Q8IX03 1113 aa19.75■□□□□ 0.75
CACNB3-201ENST00000301050 NGEFQ8N5V2 710 aa19.75■□□□□ 0.75
CACNB3-201ENST00000301050 SNX21Q969T3 373 aa19.75■□□□□ 0.75
CACNB3-201ENST00000301050 MED14O60244 1454 aa19.75■□□□□ 0.75
CACNB3-201ENST00000301050 ATP7BP35670 1465 aa19.75■□□□□ 0.75
CACNB3-201ENST00000301050 FAM135BQ49AJ0 1406 aa19.75■□□□□ 0.75
CACNB3-201ENST00000301050 ROBO2Q9HCK4 1378 aa19.75■□□□□ 0.75
CACNB3-201ENST00000301050 PLEKHG1Q9ULL1 1385 aa19.74■□□□□ 0.75
CACNB3-201ENST00000301050 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
CACNB3-201ENST00000301050 UQCRHLA0A096LP55 91 aa19.73■□□□□ 0.75
CACNB3-201ENST00000301050 UQCRHP07919 91 aa19.73■□□□□ 0.75
CACNB3-201ENST00000301050 NUDT16Q96DE0 195 aaKnown RBP19.73■□□□□ 0.75
CACNB3-201ENST00000301050 COL3A1P02461 1466 aaPredicted RBP19.73■□□□□ 0.75
CACNB3-201ENST00000301050 U2SURPO15042 1029 aaKnown RBP19.72■□□□□ 0.75
CACNB3-201ENST00000301050 FBLN1P23142 703 aa19.72■□□□□ 0.75
CACNB3-201ENST00000301050 HSP90AB1P08238 724 aaKnown RBP19.72■□□□□ 0.75
CACNB3-201ENST00000301050 ARID3AQ99856 593 aa19.71■□□□□ 0.75
CACNB3-201ENST00000301050 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
CACNB3-201ENST00000301050 BCL2L13Q9BXK5 485 aa19.71■□□□□ 0.75
CACNB3-201ENST00000301050 ZNF500O60304 480 aaPredicted RBP19.7■□□□□ 0.74
CACNB3-201ENST00000301050 RBM25P49756 843 aaKnown RBP19.7■□□□□ 0.74
CACNB3-201ENST00000301050 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
CACNB3-201ENST00000301050 XPCQ01831 940 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-201ENST00000301050 HS1BP3Q53T59 392 aa19.69■□□□□ 0.74
CACNB3-201ENST00000301050 MTERF4Q7Z6M4 381 aaKnown RBP19.69■□□□□ 0.74
CACNB3-201ENST00000301050 NOL7Q9UMY1 257 aaKnown RBP19.69■□□□□ 0.74
CACNB3-201ENST00000301050 CPSF1Q10570 1443 aaKnown RBP19.69■□□□□ 0.74
CACNB3-201ENST00000301050 IBTKQ9P2D0 1353 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-201ENST00000301050 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-201ENST00000301050 PTPRUQ92729 1446 aa19.69■□□□□ 0.74
CACNB3-201ENST00000301050 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
CACNB3-201ENST00000301050 PRDM10Q9NQV6 1147 aa19.69■□□□□ 0.74
CACNB3-201ENST00000301050 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.69■□□□□ 0.74
CACNB3-201ENST00000301050 ZHX1Q9UKY1 873 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-201ENST00000301050 NME9Q86XW9 330 aa19.68■□□□□ 0.74
CACNB3-201ENST00000301050 ZRANB1Q9UGI0 708 aa19.68■□□□□ 0.74
CACNB3-201ENST00000301050 FGD1P98174 961 aa19.68■□□□□ 0.74
CACNB3-201ENST00000301050 FOXD4L1Q9NU39 408 aa19.68■□□□□ 0.74
CACNB3-201ENST00000301050 CDC42BPGQ6DT37 1551 aa19.67■□□□□ 0.74
CACNB3-201ENST00000301050 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
CACNB3-201ENST00000301050 DYNC1I1O14576 645 aa19.67■□□□□ 0.74
CACNB3-201ENST00000301050 SLIT1O75093 1534 aa19.67■□□□□ 0.74
CACNB3-201ENST00000301050 KLHL40Q2TBA0 621 aa19.67■□□□□ 0.74
CACNB3-201ENST00000301050 CCDC61Q9Y6R9 512 aa19.67■□□□□ 0.74
CACNB3-201ENST00000301050 EDC4Q6P2E9 1401 aaKnown RBP19.66■□□□□ 0.74
CACNB3-201ENST00000301050 DDX49Q9Y6V7 483 aaKnown RBP19.66■□□□□ 0.74
CACNB3-201ENST00000301050 ARHGAP23Q9P227 1491 aa19.66■□□□□ 0.74
CACNB3-201ENST00000301050 SSFA2P28290 1259 aa19.66■□□□□ 0.74
CACNB3-201ENST00000301050 MVPQ14764 893 aaKnown RBP19.66■□□□□ 0.74
CACNB3-201ENST00000301050 ADGRB2O60241 1585 aa19.66■□□□□ 0.74
CACNB3-201ENST00000301050 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
CACNB3-201ENST00000301050 GOLGA6L22H0YM25 854 aa19.64■□□□□ 0.73
CACNB3-201ENST00000301050 DIAPH1O60610 1272 aaKnown RBP19.64■□□□□ 0.73
CACNB3-201ENST00000301050 MON2Q7Z3U7 1717 aa19.64■□□□□ 0.73
CACNB3-201ENST00000301050 POLKQ9UBT6 870 aa19.64■□□□□ 0.73
CACNB3-201ENST00000301050 ITSN1Q15811 1721 aa19.64■□□□□ 0.73
CACNB3-201ENST00000301050 PDLIM2Q96JY6 352 aa19.63■□□□□ 0.73
CACNB3-201ENST00000301050 PLEKHF1Q96S99 279 aa19.63■□□□□ 0.73
CACNB3-201ENST00000301050 AKAP12Q02952 1782 aa19.63■□□□□ 0.73
CACNB3-201ENST00000301050 CD2BP2O95400 341 aaKnown RBP19.63■□□□□ 0.73
CACNB3-201ENST00000301050 ZNF445P59923 1031 aa19.63■□□□□ 0.73
CACNB3-201ENST00000301050 AMOTL2Q9Y2J4 779 aa19.63■□□□□ 0.73
CACNB3-201ENST00000301050 PNPLA6Q8IY17 1366 aa19.62■□□□□ 0.73
CACNB3-201ENST00000301050 THEMISQ8N1K5 641 aaPredicted RBP19.62■□□□□ 0.73
CACNB3-201ENST00000301050 CLEC17AQ6ZS10 378 aa19.62■□□□□ 0.73
CACNB3-201ENST00000301050 DMTNQ08495 405 aa19.61■□□□□ 0.73
CACNB3-201ENST00000301050 CCDC27Q2M243 656 aa19.61■□□□□ 0.73
CACNB3-201ENST00000301050 UTP14CQ5TAP6 766 aaKnown RBP19.61■□□□□ 0.73
CACNB3-201ENST00000301050 WDR63Q8IWG1 891 aa19.61■□□□□ 0.73
CACNB3-201ENST00000301050 KIF2CQ99661 725 aa19.61■□□□□ 0.73
CACNB3-201ENST00000301050 MAP2P11137 1827 aaKnown RBP19.61■□□□□ 0.73
CACNB3-201ENST00000301050 EMILIN1Q9Y6C2 1016 aa19.61■□□□□ 0.73
CACNB3-201ENST00000301050 RIMS1Q86UR5 1692 aaKnown RBP19.61■□□□□ 0.73
CACNB3-201ENST00000301050 BAG4O95429 457 aaKnown RBP19.6■□□□□ 0.73
CACNB3-201ENST00000301050 CSPP1Q1MSJ5 1256 aa19.6■□□□□ 0.73
CACNB3-201ENST00000301050 RBSNQ9H1K0 784 aa19.6■□□□□ 0.73
CACNB3-201ENST00000301050 ZKSCAN5Q9Y2L8 839 aa19.6■□□□□ 0.73
CACNB3-201ENST00000301050 HDAC1Q13547 482 aaPredicted RBP19.6■□□□□ 0.73
CACNB3-201ENST00000301050 SASS6Q6UVJ0 657 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms