RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 TSPYL6Q8N831 410 aa18.85■□□□□ 0.61
USP43-201ENST00000285199 CCDC83Q8IWF9 413 aa18.85■□□□□ 0.61
USP43-201ENST00000285199 FAM177A1Q8N128 213 aaPredicted RBP18.85■□□□□ 0.61
USP43-201ENST00000285199 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
USP43-201ENST00000285199 RAB3GAP1Q15042 981 aa18.84■□□□□ 0.61
USP43-201ENST00000285199 C17orf53Q8N3J3 647 aaPredicted RBP18.84■□□□□ 0.61
USP43-201ENST00000285199 PES1O00541 588 aaKnown RBP18.84■□□□□ 0.61
USP43-201ENST00000285199 LARP1BQ659C4 914 aaKnown RBP18.84■□□□□ 0.61
USP43-201ENST00000285199 WAPLQ7Z5K2 1190 aa18.84■□□□□ 0.61
USP43-201ENST00000285199 C16orf45Q96MC5 204 aaPredicted RBP18.84■□□□□ 0.61
USP43-201ENST00000285199 UGGT2Q9NYU1 1516 aa18.84■□□□□ 0.61
USP43-201ENST00000285199 NFE2L2Q16236 605 aa18.83■□□□□ 0.61
USP43-201ENST00000285199 KRT24Q2M2I5 525 aa18.83■□□□□ 0.61
USP43-201ENST00000285199 PPP4R3BQ5MIZ7 849 aa18.83■□□□□ 0.61
USP43-201ENST00000285199 SIL1Q9H173 461 aa18.83■□□□□ 0.61
USP43-201ENST00000285199 RBSNQ9H1K0 784 aa18.83■□□□□ 0.61
USP43-201ENST00000285199 TEX14Q8IWB6 1497 aa18.83■□□□□ 0.61
USP43-201ENST00000285199 ADCY5O95622 1261 aa18.83■□□□□ 0.6
USP43-201ENST00000285199 SDSP20132 328 aa18.83■□□□□ 0.6
USP43-201ENST00000285199 MCM2P49736 904 aa18.83■□□□□ 0.6
USP43-201ENST00000285199 HDAC1Q13547 482 aaPredicted RBP18.83■□□□□ 0.6
USP43-201ENST00000285199 FCHSD2O94868 740 aa18.82■□□□□ 0.6
USP43-201ENST00000285199 GIMAP6Q6P9H5 292 aa18.82■□□□□ 0.6
USP43-201ENST00000285199 OTUD7AQ8TE49 926 aaPredicted RBP18.82■□□□□ 0.6
USP43-201ENST00000285199 ZBTB9Q96C00 473 aa18.82■□□□□ 0.6
USP43-201ENST00000285199 JAKMIP1Q96N16 626 aaKnown RBP18.82■□□□□ 0.6
USP43-201ENST00000285199 CCDC192P0DO97 292 aa18.82■□□□□ 0.6
USP43-201ENST00000285199 CSB-PGBD3P0DP91 1061 aa18.82■□□□□ 0.6
USP43-201ENST00000285199 CLASRPQ8N2M8 674 aaKnown RBP18.82■□□□□ 0.6
USP43-201ENST00000285199 TNMDQ9H2S6 317 aa18.82■□□□□ 0.6
USP43-201ENST00000285199 TFIP11Q9UBB9 837 aaKnown RBP18.82■□□□□ 0.6
USP43-201ENST00000285199 G3BP1Q13283 466 aaKnown RBP eCLIP18.81■□□□□ 0.6
USP43-201ENST00000285199 CCDC112Q8NEF3 446 aa18.81■□□□□ 0.6
USP43-201ENST00000285199 CCDC73Q6ZRK6 1079 aa18.81■□□□□ 0.6
USP43-201ENST00000285199 FSD1Q9BTV5 496 aa18.81■□□□□ 0.6
USP43-201ENST00000285199 GNAI3P08754 354 aa18.81■□□□□ 0.6
USP43-201ENST00000285199 PRAG1Q86YV5 1406 aa18.8■□□□□ 0.6
USP43-201ENST00000285199 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
USP43-201ENST00000285199 CNTROBQ8N137 903 aa18.8■□□□□ 0.6
USP43-201ENST00000285199 DDX11Q96FC9 970 aa18.8■□□□□ 0.6
USP43-201ENST00000285199 TMX3Q96JJ7 454 aa18.8■□□□□ 0.6
USP43-201ENST00000285199 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
USP43-201ENST00000285199 CASTP20810 708 aaKnown RBP18.8■□□□□ 0.6
USP43-201ENST00000285199 SRGAP3O43295 1099 aa18.8■□□□□ 0.6
USP43-201ENST00000285199 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
USP43-201ENST00000285199 GPATCH8Q9UKJ3 1502 aaKnown RBP18.79■□□□□ 0.6
USP43-201ENST00000285199 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
USP43-201ENST00000285199 SMC2O95347 1197 aa18.79■□□□□ 0.6
USP43-201ENST00000285199 RPAP2Q8IXW5 612 aaPredicted RBP18.79■□□□□ 0.6
USP43-201ENST00000285199 MEIS3Q99687 375 aa18.79■□□□□ 0.6
USP43-201ENST00000285199 TTLL5Q6EMB2 1281 aa18.79■□□□□ 0.6
USP43-201ENST00000285199 NME9Q86XW9 330 aa18.79■□□□□ 0.6
USP43-201ENST00000285199 CGNQ9P2M7 1197 aaKnown RBP18.79■□□□□ 0.6
USP43-201ENST00000285199 PKP1Q13835 747 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 SMC5Q8IY18 1101 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 MNS1Q8NEH6 495 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 TRMT1Q9NXH9 659 aaKnown RBP18.78■□□□□ 0.6
USP43-201ENST00000285199 OFD1O75665 1012 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 NEUROD6Q96NK8 337 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 PZPP20742 1482 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 ZKSCAN5Q9Y2L8 839 aa18.78■□□□□ 0.6
USP43-201ENST00000285199 RNF20Q5VTR2 975 aa18.77■□□□□ 0.6
USP43-201ENST00000285199 TCEANC2Q96MN5 208 aa18.77■□□□□ 0.6
USP43-201ENST00000285199 TAF7LQ5H9L4 462 aa18.77■□□□□ 0.6
USP43-201ENST00000285199 C8orf58Q8NAV2 365 aa18.77■□□□□ 0.6
USP43-201ENST00000285199 DNMBPQ6XZF7 1577 aa18.77■□□□□ 0.6
USP43-201ENST00000285199 MX1P20591 662 aa18.77■□□□□ 0.59
USP43-201ENST00000285199 HDGFL1Q5TGJ6 251 aa18.77■□□□□ 0.59
USP43-201ENST00000285199 PDILTQ8N807 584 aa18.77■□□□□ 0.59
USP43-201ENST00000285199 ATP2B1P20020 1258 aa18.76■□□□□ 0.59
USP43-201ENST00000285199 LRSAM1Q6UWE0 723 aa18.76■□□□□ 0.59
USP43-201ENST00000285199 DNAJC2Q99543 621 aaKnown RBP18.76■□□□□ 0.59
USP43-201ENST00000285199 CYP46A1Q9Y6A2 500 aa18.76■□□□□ 0.59
USP43-201ENST00000285199 CPLX1O14810 134 aa18.76■□□□□ 0.59
USP43-201ENST00000285199 RAPGEF3O95398 923 aa18.76■□□□□ 0.59
USP43-201ENST00000285199 TTC22Q5TAA0 569 aa18.76■□□□□ 0.59
USP43-201ENST00000285199 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
USP43-201ENST00000285199 KRT85P78386 507 aa18.75■□□□□ 0.59
USP43-201ENST00000285199 IQGAP2Q13576 1575 aa18.75■□□□□ 0.59
USP43-201ENST00000285199 NLRP6P59044 892 aa18.75■□□□□ 0.59
USP43-201ENST00000285199 PRPF40BQ6NWY9 871 aaKnown RBP18.75■□□□□ 0.59
USP43-201ENST00000285199 SNX21Q969T3 373 aa18.75■□□□□ 0.59
USP43-201ENST00000285199 NUP62CLQ9H1M0 184 aa18.75■□□□□ 0.59
USP43-201ENST00000285199 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.75■□□□□ 0.59
USP43-201ENST00000285199 V9GYY5 206 aaPredicted RBP18.75■□□□□ 0.59
USP43-201ENST00000285199 CD2BP2O95400 341 aaKnown RBP18.74■□□□□ 0.59
USP43-201ENST00000285199 ALDH1L2Q3SY69 923 aa18.74■□□□□ 0.59
USP43-201ENST00000285199 CNPY2Q9Y2B0 182 aa18.74■□□□□ 0.59
USP43-201ENST00000285199 SPATA32Q96LK8 384 aa18.74■□□□□ 0.59
USP43-201ENST00000285199 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
USP43-201ENST00000285199 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
USP43-201ENST00000285199 CCDC30Q5VVM6 783 aa18.73■□□□□ 0.59
USP43-201ENST00000285199 KDM6BO15054 1643 aa18.73■□□□□ 0.59
USP43-201ENST00000285199 KINO60870 393 aaKnown RBP18.73■□□□□ 0.59
USP43-201ENST00000285199 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
USP43-201ENST00000285199 PHACTR3Q96KR7 559 aa18.73■□□□□ 0.59
USP43-201ENST00000285199 APPP05067 770 aa18.73■□□□□ 0.59
USP43-201ENST00000285199 USP48Q86UV5 1035 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms