RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 HDGFL1Q5TGJ6 251 aa17.57■□□□□ 0.4
TMEM47-201ENST00000275954 CADPS2Q86UW7 1296 aa17.57■□□□□ 0.4
TMEM47-201ENST00000275954 F6X3S4 739 aa17.57■□□□□ 0.4
TMEM47-201ENST00000275954 RIMBP3CA6NJZ7 1639 aa17.57■□□□□ 0.4
TMEM47-201ENST00000275954 RIMBP3BA6NNM3 1639 aa17.57■□□□□ 0.4
TMEM47-201ENST00000275954 RIMBP3Q9UFD9 1639 aa17.57■□□□□ 0.4
TMEM47-201ENST00000275954 DIAPH3Q9NSV4 1193 aa17.56■□□□□ 0.4
TMEM47-201ENST00000275954 COL17A1Q9UMD9 1497 aaPredicted RBP17.56■□□□□ 0.4
TMEM47-201ENST00000275954 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
TMEM47-201ENST00000275954 TAF7LQ5H9L4 462 aa17.56■□□□□ 0.4
TMEM47-201ENST00000275954 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
TMEM47-201ENST00000275954 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
TMEM47-201ENST00000275954 PPP1R1BQ9UD71 204 aaPredicted RBP17.55■□□□□ 0.4
TMEM47-201ENST00000275954 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
TMEM47-201ENST00000275954 SMARCA5O60264 1052 aaPredicted RBP17.54■□□□□ 0.4
TMEM47-201ENST00000275954 HDAC5Q9UQL6 1122 aa17.54■□□□□ 0.4
TMEM47-201ENST00000275954 EXOC6BQ9Y2D4 811 aa17.54■□□□□ 0.4
TMEM47-201ENST00000275954 AEBP1Q8IUX7 1158 aa17.54■□□□□ 0.4
TMEM47-201ENST00000275954 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
TMEM47-201ENST00000275954 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
TMEM47-201ENST00000275954 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
TMEM47-201ENST00000275954 IL1RAPL2Q9NP60 686 aa17.53■□□□□ 0.4
TMEM47-201ENST00000275954 NINLQ9Y2I6 1382 aa17.53■□□□□ 0.4
TMEM47-201ENST00000275954 NEO1Q92859 1461 aa17.53■□□□□ 0.4
TMEM47-201ENST00000275954 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
TMEM47-201ENST00000275954 NEK4P51957 841 aa17.52■□□□□ 0.4
TMEM47-201ENST00000275954 GCC2Q8IWJ2 1684 aa17.52■□□□□ 0.4
TMEM47-201ENST00000275954 MCTP1Q6DN14 999 aa17.52■□□□□ 0.4
TMEM47-201ENST00000275954 C19orf44Q9H6X5 657 aa17.52■□□□□ 0.4
TMEM47-201ENST00000275954 ZFYVE16Q7Z3T8 1539 aa17.52■□□□□ 0.4
TMEM47-201ENST00000275954 TRAK2O60296 914 aa17.52■□□□□ 0.39
TMEM47-201ENST00000275954 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.39
TMEM47-201ENST00000275954 GNAI2P04899 355 aa17.51■□□□□ 0.39
TMEM47-201ENST00000275954 GNAI3P08754 354 aa17.51■□□□□ 0.39
TMEM47-201ENST00000275954 MYL6BP14649 208 aa17.51■□□□□ 0.39
TMEM47-201ENST00000275954 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
TMEM47-201ENST00000275954 LMTK3Q96Q04 1460 aa17.51■□□□□ 0.39
TMEM47-201ENST00000275954 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
TMEM47-201ENST00000275954 MBIPQ9NS73 344 aa17.51■□□□□ 0.39
TMEM47-201ENST00000275954 RIC3Q7Z5B4 369 aa17.51■□□□□ 0.39
TMEM47-201ENST00000275954 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
TMEM47-201ENST00000275954 TATP17735 454 aaPredicted RBP17.5■□□□□ 0.39
TMEM47-201ENST00000275954 ARID3AQ99856 593 aa17.5■□□□□ 0.39
TMEM47-201ENST00000275954 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
TMEM47-201ENST00000275954 MYO5CQ9NQX4 1742 aa17.49■□□□□ 0.39
TMEM47-201ENST00000275954 MSH6P52701 1360 aa17.49■□□□□ 0.39
TMEM47-201ENST00000275954 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
TMEM47-201ENST00000275954 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
TMEM47-201ENST00000275954 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
TMEM47-201ENST00000275954 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
TMEM47-201ENST00000275954 SEC24BO95487 1268 aa17.48■□□□□ 0.39
TMEM47-201ENST00000275954 TOM1O60784 492 aa17.48■□□□□ 0.39
TMEM47-201ENST00000275954 PTMSP20962 102 aa17.48■□□□□ 0.39
TMEM47-201ENST00000275954 PIP4K2AP48426 406 aaPredicted RBP17.48■□□□□ 0.39
TMEM47-201ENST00000275954 DRC7Q8IY82 874 aa17.48■□□□□ 0.39
TMEM47-201ENST00000275954 RNF123Q5XPI4 1314 aa17.48■□□□□ 0.39
TMEM47-201ENST00000275954 METP08581 1390 aa17.48■□□□□ 0.39
TMEM47-201ENST00000275954 C8orf34Q49A92 452 aa17.48■□□□□ 0.39
TMEM47-201ENST00000275954 CCDC85AQ96PX6 553 aaPredicted RBP17.48■□□□□ 0.39
TMEM47-201ENST00000275954 IFT57Q9NWB7 429 aa17.48■□□□□ 0.39
TMEM47-201ENST00000275954 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
TMEM47-201ENST00000275954 ANXA1P04083 346 aa17.47■□□□□ 0.39
TMEM47-201ENST00000275954 TBC1D2Q9BYX2 928 aa17.47■□□□□ 0.39
TMEM47-201ENST00000275954 TBX22Q9Y458 520 aa17.47■□□□□ 0.39
TMEM47-201ENST00000275954 GLIPR1L2Q4G1C9 344 aa17.47■□□□□ 0.39
TMEM47-201ENST00000275954 A0A1W2PP64 1363 aa17.47■□□□□ 0.39
TMEM47-201ENST00000275954 DDX58O95786 925 aaKnown RBP17.47■□□□□ 0.39
TMEM47-201ENST00000275954 ACSBG1Q96GR2 724 aa17.47■□□□□ 0.39
TMEM47-201ENST00000275954 C8orf58Q8NAV2 365 aa17.46■□□□□ 0.39
TMEM47-201ENST00000275954 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.39
TMEM47-201ENST00000275954 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.38
TMEM47-201ENST00000275954 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
TMEM47-201ENST00000275954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
TMEM47-201ENST00000275954 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
TMEM47-201ENST00000275954 ABCC11Q96J66 1382 aa17.45■□□□□ 0.38
TMEM47-201ENST00000275954 SIL1Q9H173 461 aa17.45■□□□□ 0.38
TMEM47-201ENST00000275954 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
TMEM47-201ENST00000275954 PLEKHO1Q53GL0 409 aaPredicted RBP17.44■□□□□ 0.38
TMEM47-201ENST00000275954 CLASRPQ8N2M8 674 aaKnown RBP17.44■□□□□ 0.38
TMEM47-201ENST00000275954 CABP4P57796 275 aa17.44■□□□□ 0.38
TMEM47-201ENST00000275954 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
TMEM47-201ENST00000275954 SRGAP3O43295 1099 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 CCT4P50991 539 aaKnown RBP17.43■□□□□ 0.38
TMEM47-201ENST00000275954 SRCIN1Q9C0H9 1055 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 PLA2R1Q13018 1463 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 MAGI2Q86UL8 1455 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 VPS37CA5D8V6 355 aaPredicted RBP17.43■□□□□ 0.38
TMEM47-201ENST00000275954 ZKSCAN1P17029 563 aaPredicted RBP17.43■□□□□ 0.38
TMEM47-201ENST00000275954 TSHZ3Q63HK5 1081 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 BICDL1Q6ZP65 573 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 NEUROD6Q96NK8 337 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 SLAIN2Q9P270 581 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 SKOR2Q2VWA4 1001 aaPredicted RBP17.43■□□□□ 0.38
TMEM47-201ENST00000275954 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
TMEM47-201ENST00000275954 YTHDC2Q9H6S0 1430 aaKnown RBP17.42■□□□□ 0.38
TMEM47-201ENST00000275954 NSD2O96028 1365 aa17.42■□□□□ 0.38
TMEM47-201ENST00000275954 ABCC1P33527 1531 aa17.42■□□□□ 0.38
TMEM47-201ENST00000275954 RUFY2Q8WXA3 655 aa17.42■□□□□ 0.38
TMEM47-201ENST00000275954 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
TMEM47-201ENST00000275954 NUCB2P80303 420 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms