RNA–Protein interactions for RNA: ENST00000271640.9

SETDB1-201, Transcript of SET domain bifurcated 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SETDB1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-201ENST00000271640 IFT57Q9NWB7 429 aa8.72□□□□□ -1.01
SETDB1-201ENST00000271640 LMOD2Q6P5Q4 547 aa8.72□□□□□ -1.01
SETDB1-201ENST00000271640 MTERF4Q7Z6M4 381 aaKnown RBP8.72□□□□□ -1.01
SETDB1-201ENST00000271640 NGDNQ8NEJ9 315 aaKnown RBP8.72□□□□□ -1.01
SETDB1-201ENST00000271640 GPATCH3Q96I76 525 aa8.72□□□□□ -1.01
SETDB1-201ENST00000271640 PDCL3Q9H2J4 239 aa8.72□□□□□ -1.01
SETDB1-201ENST00000271640 EMILIN1Q9Y6C2 1016 aa8.72□□□□□ -1.01
SETDB1-201ENST00000271640 CDC42BPAQ5VT25 1732 aa8.71□□□□□ -1.01
SETDB1-201ENST00000271640 SAMD9LQ8IVG5 1584 aa8.71□□□□□ -1.01
SETDB1-201ENST00000271640 FYB1O15117 783 aa8.71□□□□□ -1.01
SETDB1-201ENST00000271640 FIBPO43427 364 aa8.71□□□□□ -1.01
SETDB1-201ENST00000271640 EXOC6BQ9Y2D4 811 aa8.71□□□□□ -1.01
SETDB1-201ENST00000271640 SYNMO15061 1565 aa8.71□□□□□ -1.01
SETDB1-201ENST00000271640 KDM5AP29375 1690 aaKnown RBP8.71□□□□□ -1.01
SETDB1-201ENST00000271640 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
SETDB1-201ENST00000271640 GNAI2P04899 355 aa8.71□□□□□ -1.02
SETDB1-201ENST00000271640 EIF2S2P20042 333 aaKnown RBP8.71□□□□□ -1.02
SETDB1-201ENST00000271640 FSD2A1L4K1 749 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 NRDCO43847 1150 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 TTC22Q5TAA0 569 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 UPF3BQ9BZI7 483 aaKnown RBP8.7□□□□□ -1.02
SETDB1-201ENST00000271640 CROCC2H7BZ55 1655 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 FANCAO15360 1455 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 C16orf71Q8IYS4 520 aaPredicted RBP8.7□□□□□ -1.02
SETDB1-201ENST00000271640 FAM83GA6ND36 823 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 RAPGEF3O95398 923 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 TSPYL6Q8N831 410 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 LRRCC1Q9C099 1032 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 PTPRTO14522 1441 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 GNAI3P08754 354 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 HSP90B1P14625 803 aaKnown RBP8.7□□□□□ -1.02
SETDB1-201ENST00000271640 SLC52A1Q9NWF4 448 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 TRIM35Q9UPQ4 493 aa8.7□□□□□ -1.02
SETDB1-201ENST00000271640 HTATSF1O43719 755 aaKnown RBP8.69□□□□□ -1.02
SETDB1-201ENST00000271640 UBTFL1P0CB47 393 aaPredicted RBP8.69□□□□□ -1.02
SETDB1-201ENST00000271640 MCM10Q7L590 875 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 MRPL50Q8N5N7 158 aaKnown RBP8.69□□□□□ -1.02
SETDB1-201ENST00000271640 WDR33Q9C0J8 1336 aaKnown RBP8.69□□□□□ -1.02
SETDB1-201ENST00000271640 SURF6O75683 361 aaKnown RBP8.69□□□□□ -1.02
SETDB1-201ENST00000271640 WAPLQ7Z5K2 1190 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 RUFY2Q8WXA3 655 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 GDPD2Q9HCC8 539 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 MAP4K4O95819 1239 aaPredicted RBP8.69□□□□□ -1.02
SETDB1-201ENST00000271640 ZKSCAN1P17029 563 aaPredicted RBP8.69□□□□□ -1.02
SETDB1-201ENST00000271640 SDSP20132 328 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 IDI1Q13907 227 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 NME9Q86XW9 330 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 ARHGAP45Q92619 1136 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 MIS18AQ9NYP9 233 aa8.69□□□□□ -1.02
SETDB1-201ENST00000271640 VAMP4O75379 141 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 PRIM1P49642 420 aaKnown RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 GAS2L3Q86XJ1 694 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ZNF592Q92610 1267 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ABCA8O94911 1581 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ZMYM3Q14202 1370 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 RTEL1-TNFRSF6BF6WH68 1400 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ERVK-7P63135 1459 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 CCT4P50991 539 aaKnown RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 TXNDC2Q86VQ3 553 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 SPC24Q8NBT2 197 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 HMGN5P82970 282 aaKnown RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ZGPATQ8N5A5 531 aaKnown RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 C8orf58Q8NAV2 365 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 IL1RAPL2Q9NP60 686 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 F6X3S4 739 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 CDK11BP21127 795 aaKnown RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 TSHZ3Q63HK5 1081 aa8.68□□□□□ -1.02
SETDB1-201ENST00000271640 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
SETDB1-201ENST00000271640 ADCY10Q96PN6 1610 aa8.67□□□□□ -1.02
SETDB1-201ENST00000271640 A0A1W2PP64 1363 aa8.67□□□□□ -1.02
SETDB1-201ENST00000271640 GOLGA6L19H0YKK7 550 aa8.67□□□□□ -1.02
SETDB1-201ENST00000271640 ATP10AO60312 1499 aa8.67□□□□□ -1.02
SETDB1-201ENST00000271640 BICD2Q8TD16 824 aa8.67□□□□□ -1.02
SETDB1-201ENST00000271640 PHACTR3Q96KR7 559 aa8.67□□□□□ -1.02
SETDB1-201ENST00000271640 PLEKHM2Q8IWE5 1019 aa8.67□□□□□ -1.02
SETDB1-201ENST00000271640 H3BQV1 296 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 LETM1O95202 739 aaPredicted RBP8.66□□□□□ -1.02
SETDB1-201ENST00000271640 IFIT2P09913 472 aaKnown RBP8.66□□□□□ -1.02
SETDB1-201ENST00000271640 IFFO2Q5TF58 517 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 SASS6Q6UVJ0 657 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 LRSAM1Q6UWE0 723 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 CNTROBQ8N137 903 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 OFD1O75665 1012 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 CCDC30Q5VVM6 783 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 CHMP4AQ9BY43 222 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 C9orf78Q9NZ63 289 aaPredicted RBP8.66□□□□□ -1.02
SETDB1-201ENST00000271640 CFAP65Q6ZU64 1925 aaKnown RBP8.66□□□□□ -1.02
SETDB1-201ENST00000271640 MX1P20591 662 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 MEIS3Q99687 375 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 USP25Q9UHP3 1055 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 BECN2A8MW95 431 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 TMX3Q96JJ7 454 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 HDAC5Q9UQL6 1122 aa8.66□□□□□ -1.02
SETDB1-201ENST00000271640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.66□□□□□ -1.02
SETDB1-201ENST00000271640 RBSNQ9H1K0 784 aa8.65□□□□□ -1.02
SETDB1-201ENST00000271640 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
SETDB1-201ENST00000271640 ANKRD44Q8N8A2 993 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms