RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 TMEM131LA2VDJ0 1609 aa28.44■■■□□ 2.14
THRA-201ENST00000264637 MRE11P49959 708 aa28.44■■■□□ 2.14
THRA-201ENST00000264637 GCC1Q96CN9 775 aa28.44■■■□□ 2.14
THRA-201ENST00000264637 MBIPQ9NS73 344 aa28.43■■■□□ 2.14
THRA-201ENST00000264637 YEATS2Q9ULM3 1422 aa28.43■■■□□ 2.14
THRA-201ENST00000264637 GRPEL1Q9HAV7 217 aa28.43■■■□□ 2.14
THRA-201ENST00000264637 KIF20BQ96Q89 1820 aa28.43■■■□□ 2.14
THRA-201ENST00000264637 ZNF428Q96B54 188 aa28.42■■■□□ 2.14
THRA-201ENST00000264637 CDC42BPGQ6DT37 1551 aa28.41■■■□□ 2.14
THRA-201ENST00000264637 RAB3GAP1Q15042 981 aa28.4■■■□□ 2.14
THRA-201ENST00000264637 ARHGAP45Q92619 1136 aa28.4■■■□□ 2.14
THRA-201ENST00000264637 PTCH1Q13635 1447 aa28.4■■■□□ 2.14
THRA-201ENST00000264637 HSP90AA1P07900 732 aaKnown RBP28.39■■■□□ 2.14
THRA-201ENST00000264637 ZRANB1Q9UGI0 708 aa28.39■■■□□ 2.14
THRA-201ENST00000264637 PIK3R4Q99570 1358 aa28.39■■■□□ 2.14
THRA-201ENST00000264637 C8orf58Q8NAV2 365 aa28.39■■■□□ 2.14
THRA-201ENST00000264637 ALKQ9UM73 1620 aa28.39■■■□□ 2.13
THRA-201ENST00000264637 GAS2L3Q86XJ1 694 aa28.38■■■□□ 2.13
THRA-201ENST00000264637 ABCC4O15439 1325 aa28.38■■■□□ 2.13
THRA-201ENST00000264637 GNAI1P63096 354 aa28.37■■■□□ 2.13
THRA-201ENST00000264637 TWISTNBQ3B726 338 aaPredicted RBP28.37■■■□□ 2.13
THRA-201ENST00000264637 IFT57Q9NWB7 429 aa28.37■■■□□ 2.13
THRA-201ENST00000264637 PREX1Q8TCU6 1659 aa28.37■■■□□ 2.13
THRA-201ENST00000264637 FAM83GA6ND36 823 aa28.37■■■□□ 2.13
THRA-201ENST00000264637 CIZ1Q9ULV3 898 aaPredicted RBP28.37■■■□□ 2.13
THRA-201ENST00000264637 ZNF853P0CG23 659 aa28.36■■■□□ 2.13
THRA-201ENST00000264637 MAP2P11137 1827 aaKnown RBP28.36■■■□□ 2.13
THRA-201ENST00000264637 NEO1Q92859 1461 aa28.36■■■□□ 2.13
THRA-201ENST00000264637 IL13P35225 146 aa28.36■■■□□ 2.13
THRA-201ENST00000264637 K7ELQ4 463 aaPredicted RBP28.35■■■□□ 2.13
THRA-201ENST00000264637 NME9Q86XW9 330 aa28.35■■■□□ 2.13
THRA-201ENST00000264637 STAG3Q9UJ98 1225 aa28.35■■■□□ 2.13
THRA-201ENST00000264637 GBP4Q96PP9 640 aa28.35■■■□□ 2.13
THRA-201ENST00000264637 DCTN1Q14203 1278 aa28.34■■■□□ 2.13
THRA-201ENST00000264637 GAS2L2Q8NHY3 880 aa28.34■■■□□ 2.13
THRA-201ENST00000264637 GSPT1P15170 499 aaKnown RBP28.33■■■□□ 2.13
THRA-201ENST00000264637 CHMP4BQ9H444 224 aaKnown RBP28.33■■■□□ 2.13
THRA-201ENST00000264637 CALD1Q05682 793 aaKnown RBP28.33■■■□□ 2.13
THRA-201ENST00000264637 SSFA2P28290 1259 aa28.32■■■□□ 2.12
THRA-201ENST00000264637 CLCN1P35523 988 aa28.32■■■□□ 2.12
THRA-201ENST00000264637 RRS1Q15050 365 aaKnown RBP28.3■■■□□ 2.12
THRA-201ENST00000264637 CDC45O75419 566 aa28.29■■■□□ 2.12
THRA-201ENST00000264637 C16orf71Q8IYS4 520 aaPredicted RBP28.29■■■□□ 2.12
THRA-201ENST00000264637 CFAP44Q96MT7 982 aa28.29■■■□□ 2.12
THRA-201ENST00000264637 PLEKHM2Q8IWE5 1019 aa28.28■■■□□ 2.12
THRA-201ENST00000264637 RICTORQ6R327 1708 aa28.28■■■□□ 2.12
THRA-201ENST00000264637 ERBB4Q15303 1308 aa28.28■■■□□ 2.12
THRA-201ENST00000264637 NCKAP5LQ9HCH0 1330 aa28.28■■■□□ 2.12
THRA-201ENST00000264637 NAP1L5Q96NT1 182 aaPredicted RBP28.27■■■□□ 2.12
THRA-201ENST00000264637 ATP7BP35670 1465 aa28.26■■■□□ 2.11
THRA-201ENST00000264637 API5Q9BZZ5 524 aaKnown RBP28.26■■■□□ 2.11
THRA-201ENST00000264637 ISY1Q9ULR0 285 aaKnown RBP28.25■■■□□ 2.11
THRA-201ENST00000264637 KNDC1Q76NI1 1749 aa28.25■■■□□ 2.11
THRA-201ENST00000264637 KRT24Q2M2I5 525 aa28.24■■■□□ 2.11
THRA-201ENST00000264637 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
THRA-201ENST00000264637 OTUD7AQ8TE49 926 aaPredicted RBP28.24■■■□□ 2.11
THRA-201ENST00000264637 SKOR2Q2VWA4 1001 aaPredicted RBP28.23■■■□□ 2.11
THRA-201ENST00000264637 DLG5Q8TDM6 1919 aa28.23■■■□□ 2.11
THRA-201ENST00000264637 RIMS2Q9UQ26 1411 aa28.23■■■□□ 2.11
THRA-201ENST00000264637 DCTPP1Q9H773 170 aa28.23■■■□□ 2.11
THRA-201ENST00000264637 ESPNB1AK53 854 aa28.21■■■□□ 2.11
THRA-201ENST00000264637 AK9Q5TCS8 1911 aa28.2■■■□□ 2.11
THRA-201ENST00000264637 TTC22Q5TAA0 569 aa28.2■■■□□ 2.11
THRA-201ENST00000264637 CPSF1Q10570 1443 aaKnown RBP28.2■■■□□ 2.11
THRA-201ENST00000264637 CDK12Q9NYV4 1490 aaPredicted RBP28.2■■■□□ 2.1
THRA-201ENST00000264637 EDC4Q6P2E9 1401 aaKnown RBP28.19■■■□□ 2.1
THRA-201ENST00000264637 APBB1O00213 710 aa28.19■■■□□ 2.1
THRA-201ENST00000264637 LMOD3Q0VAK6 560 aa28.19■■■□□ 2.1
THRA-201ENST00000264637 WASLO00401 505 aaPredicted RBP28.19■■■□□ 2.1
THRA-201ENST00000264637 BAG4O95429 457 aaKnown RBP28.18■■■□□ 2.1
THRA-201ENST00000264637 AEBP1Q8IUX7 1158 aa28.18■■■□□ 2.1
THRA-201ENST00000264637 COG3Q96JB2 828 aa28.18■■■□□ 2.1
THRA-201ENST00000264637 SMARCA5O60264 1052 aaPredicted RBP28.17■■■□□ 2.1
THRA-201ENST00000264637 USP26Q9BXU7 913 aa28.16■■■□□ 2.1
THRA-201ENST00000264637 TXNDC2Q86VQ3 553 aa28.16■■■□□ 2.1
THRA-201ENST00000264637 TRIM44Q96DX7 344 aaPredicted RBP28.16■■■□□ 2.1
THRA-201ENST00000264637 CPS1P31327 1500 aa28.15■■■□□ 2.1
THRA-201ENST00000264637 INTS3Q68E01 1043 aaKnown RBP28.15■■■□□ 2.1
THRA-201ENST00000264637 DDX49Q9Y6V7 483 aaKnown RBP28.15■■■□□ 2.1
THRA-201ENST00000264637 AATKQ6ZMQ8 1374 aa28.15■■■□□ 2.1
THRA-201ENST00000264637 DLC1Q96QB1 1528 aa28.14■■■□□ 2.1
THRA-201ENST00000264637 PTMSP20962 102 aa28.14■■■□□ 2.1
THRA-201ENST00000264637 PKP1Q13835 747 aa28.14■■■□□ 2.1
THRA-201ENST00000264637 RABEP1Q15276 862 aa28.14■■■□□ 2.1
THRA-201ENST00000264637 NUDT16Q96DE0 195 aaKnown RBP28.14■■■□□ 2.1
THRA-201ENST00000264637 ANKRD44Q8N8A2 993 aa28.14■■■□□ 2.09
THRA-201ENST00000264637 ATP10DQ9P241 1426 aa28.13■■■□□ 2.09
THRA-201ENST00000264637 GOLGA6L22H0YM25 854 aa28.13■■■□□ 2.09
THRA-201ENST00000264637 CLEC17AQ6ZS10 378 aa28.13■■■□□ 2.09
THRA-201ENST00000264637 SDSP20132 328 aa28.12■■■□□ 2.09
THRA-201ENST00000264637 CEP85Q6P2H3 762 aa28.12■■■□□ 2.09
THRA-201ENST00000264637 MCM10Q7L590 875 aa28.12■■■□□ 2.09
THRA-201ENST00000264637 RGS12O14924 1447 aa28.12■■■□□ 2.09
THRA-201ENST00000264637 REREQ9P2R6 1566 aa28.12■■■□□ 2.09
THRA-201ENST00000264637 A2ML1A8K2U0 1454 aa28.11■■■□□ 2.09
THRA-201ENST00000264637 RIMBP3CA6NJZ7 1639 aa28.11■■■□□ 2.09
THRA-201ENST00000264637 RIMBP3BA6NNM3 1639 aa28.11■■■□□ 2.09
THRA-201ENST00000264637 RIMBP3Q9UFD9 1639 aa28.11■■■□□ 2.09
THRA-201ENST00000264637 MCTP1Q6DN14 999 aa28.11■■■□□ 2.09
THRA-201ENST00000264637 SULT6B1Q6IMI4 303 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms