RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 SF3B1O75533 1304 aaKnown RBP eCLIP23.37■■□□□ 1.333e-6■■■■■ 112.6
THRA-201ENST00000264637 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.91■■□□□ 1.424e-10■■■■■ 87
THRA-201ENST00000264637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.82■■□□□ 1.569e-10■■■■■ 79.8
THRA-201ENST00000264637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.59■■□□□ 1.534e-6■■■■■ 70.5
THRA-201ENST00000264637 AGGF1Q8N302 714 aaeCLIP24.01■■□□□ 1.438e-9■■■■■ 68.6
THRA-201ENST00000264637 HNRNPLP14866 589 aaKnown RBP eCLIP23.07■■□□□ 1.282e-7■■■■■ 40.9
THRA-201ENST00000264637 UPF1Q92900 1129 aaKnown RBP eCLIP21.99■■□□□ 1.111e-7■■■■■ 35.6
THRA-201ENST00000264637 AKAP1Q92667 903 aaKnown RBP eCLIP21.28■■□□□ 11e-6■■■■■ 33.9
THRA-201ENST00000264637 DDX3XO00571 662 aaKnown RBP eCLIP24.84■■□□□ 1.575e-7■■■■■ 33.6
THRA-201ENST00000264637 PTBP1P26599 531 aaKnown RBP eCLIP21.26■□□□□ 0.996e-10■■■■■ 32.4
THRA-201ENST00000264637 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.98■■□□□ 1.113e-6■■■■■ 30.4
THRA-201ENST00000264637 PCBP1Q15365 356 aaKnown RBP eCLIP22.82■■□□□ 1.243e-6■■■■■ 30.3
THRA-201ENST00000264637 ZC3H11AO75152 810 aaKnown RBP eCLIP24.07■■□□□ 1.445e-7■■■■■ 28.6
THRA-201ENST00000264637 GRSF1Q12849 480 aaKnown RBP eCLIP22.53■■□□□ 1.25e-8■■■■■ 27.4
THRA-201ENST00000264637 AQRO60306 1485 aaKnown RBP eCLIP32.22■■■□□ 2.752e-6■■■■□ 25.7
THRA-201ENST00000264637 PCBP2Q15366 365 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■■■■□ 23.8
THRA-201ENST00000264637 GTF2F1P35269 517 aaKnown RBP eCLIP27.06■■□□□ 1.921e-6■■■■□ 23.1
THRA-201ENST00000264637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■■□ 22.3
THRA-201ENST00000264637 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.86■■□□□ 1.577e-6■■■■□ 21.2
THRA-201ENST00000264637 DDX6P26196 483 aaKnown RBP eCLIP21.25■□□□□ 0.992e-7■■■■□ 20.6
THRA-201ENST00000264637 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.12■■□□□ 1.133e-6■■■■□ 20.1
THRA-201ENST00000264637 RBFOX2O43251 390 aaKnown RBP eCLIP18.96■□□□□ 0.634e-7■■■□□ 18.8
THRA-201ENST00000264637 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.13■□□□□ 0.976e-8■■■□□ 16.6
THRA-201ENST00000264637 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.32■■□□□ 1.483e-7■■■□□ 16.2
THRA-201ENST00000264637 PABPC4Q13310 644 aaKnown RBP eCLIP24.89■■□□□ 1.572e-8■■□□□ 14.5
THRA-201ENST00000264637 SF3B4Q15427 424 aaKnown RBP eCLIP21.99■■□□□ 1.119e-6■■□□□ 14.4
THRA-201ENST00000264637 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■□□□ 13.9
THRA-201ENST00000264637 METAP2P50579 478 aaKnown RBP eCLIP26.29■■□□□ 1.88e-6■■□□□ 13.7
THRA-201ENST00000264637 ILF3Q12906 894 aaKnown RBP eCLIP20.77■□□□□ 0.921e-6■■□□□ 12.6
THRA-201ENST00000264637 QKIQ96PU8 341 aaKnown RBP eCLIP23.41■■□□□ 1.342e-6■□□□□ 10.6
THRA-201ENST00000264637 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.46■■□□□ 1.993e-6■□□□□ 8.4
Retrieved 31 of 31 RNA–protein pairs in 8.4 ms