RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CDC42BPGQ6DT37 1551 aa20.59■□□□□ 0.89
TM9SF1-201ENST00000261789 ATP7BP35670 1465 aa20.59■□□□□ 0.89
TM9SF1-201ENST00000261789 ARXQ96QS3 562 aa20.59■□□□□ 0.89
TM9SF1-201ENST00000261789 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
TM9SF1-201ENST00000261789 C8orf58Q8NAV2 365 aa20.58■□□□□ 0.89
TM9SF1-201ENST00000261789 NUDT16Q96DE0 195 aaKnown RBP20.57■□□□□ 0.88
TM9SF1-201ENST00000261789 GNAI1P63096 354 aa20.56■□□□□ 0.88
TM9SF1-201ENST00000261789 TWISTNBQ3B726 338 aaPredicted RBP20.56■□□□□ 0.88
TM9SF1-201ENST00000261789 SIRT2Q8IXJ6 389 aa20.56■□□□□ 0.88
TM9SF1-201ENST00000261789 CPSF1Q10570 1443 aaKnown RBP20.56■□□□□ 0.88
TM9SF1-201ENST00000261789 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-201ENST00000261789 IFT57Q9NWB7 429 aa20.55■□□□□ 0.88
TM9SF1-201ENST00000261789 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-201ENST00000261789 ZNF853P0CG23 659 aa20.54■□□□□ 0.88
TM9SF1-201ENST00000261789 COG3Q96JB2 828 aa20.54■□□□□ 0.88
TM9SF1-201ENST00000261789 EDC4Q6P2E9 1401 aaKnown RBP20.54■□□□□ 0.88
TM9SF1-201ENST00000261789 SETD1AO15047 1707 aaKnown RBP20.54■□□□□ 0.88
TM9SF1-201ENST00000261789 DLC1Q96QB1 1528 aa20.54■□□□□ 0.88
TM9SF1-201ENST00000261789 GZF1Q9H116 711 aaPredicted RBP20.54■□□□□ 0.88
TM9SF1-201ENST00000261789 CPS1P31327 1500 aa20.54■□□□□ 0.88
TM9SF1-201ENST00000261789 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
TM9SF1-201ENST00000261789 NUTM2FA1L443 756 aa20.52■□□□□ 0.88
TM9SF1-201ENST00000261789 MCM4P33991 863 aa20.52■□□□□ 0.88
TM9SF1-201ENST00000261789 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.88
TM9SF1-201ENST00000261789 HSCBQ8IWL3 235 aa20.52■□□□□ 0.88
TM9SF1-201ENST00000261789 AEBP1Q8IUX7 1158 aa20.52■□□□□ 0.88
TM9SF1-201ENST00000261789 CFAP44Q96MT7 982 aa20.52■□□□□ 0.88
TM9SF1-201ENST00000261789 CCDC61Q9Y6R9 512 aa20.52■□□□□ 0.88
TM9SF1-201ENST00000261789 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
TM9SF1-201ENST00000261789 ARHGAP45Q92619 1136 aa20.51■□□□□ 0.87
TM9SF1-201ENST00000261789 CHMP5Q9NZZ3 219 aa20.51■□□□□ 0.87
TM9SF1-201ENST00000261789 DLG5Q8TDM6 1919 aa20.5■□□□□ 0.87
TM9SF1-201ENST00000261789 PTCH1Q13635 1447 aa20.5■□□□□ 0.87
TM9SF1-201ENST00000261789 RBM25P49756 843 aaKnown RBP20.5■□□□□ 0.87
TM9SF1-201ENST00000261789 BMP2KLQ5H9B9 411 aa20.5■□□□□ 0.87
TM9SF1-201ENST00000261789 ABCC4O15439 1325 aa20.5■□□□□ 0.87
TM9SF1-201ENST00000261789 SPATA31D1Q6ZQQ2 1576 aa20.49■□□□□ 0.87
TM9SF1-201ENST00000261789 CDK12Q9NYV4 1490 aaPredicted RBP20.49■□□□□ 0.87
TM9SF1-201ENST00000261789 NRXN3Q9Y4C0 1643 aa20.49■□□□□ 0.87
TM9SF1-201ENST00000261789 PRR36Q9H6K5 1346 aa20.49■□□□□ 0.87
TM9SF1-201ENST00000261789 GCC1Q96CN9 775 aa20.49■□□□□ 0.87
TM9SF1-201ENST00000261789 PIK3R4Q99570 1358 aa20.48■□□□□ 0.87
TM9SF1-201ENST00000261789 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
TM9SF1-201ENST00000261789 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.47■□□□□ 0.87
TM9SF1-201ENST00000261789 AATKQ6ZMQ8 1374 aa20.47■□□□□ 0.87
TM9SF1-201ENST00000261789 SOX12O15370 315 aa20.47■□□□□ 0.87
TM9SF1-201ENST00000261789 SULT6B1Q6IMI4 303 aa20.47■□□□□ 0.87
TM9SF1-201ENST00000261789 TBC1D9Q6ZT07 1266 aa20.47■□□□□ 0.87
TM9SF1-201ENST00000261789 KIF2CQ99661 725 aa20.47■□□□□ 0.87
TM9SF1-201ENST00000261789 CD2BP2O95400 341 aaKnown RBP20.46■□□□□ 0.87
TM9SF1-201ENST00000261789 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
TM9SF1-201ENST00000261789 RBM42Q9BTD8 480 aaKnown RBP20.46■□□□□ 0.87
TM9SF1-201ENST00000261789 MCM10Q7L590 875 aa20.45■□□□□ 0.86
TM9SF1-201ENST00000261789 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
TM9SF1-201ENST00000261789 EIF4A2Q14240 407 aaKnown RBP20.44■□□□□ 0.86
TM9SF1-201ENST00000261789 TRAK2O60296 914 aa20.43■□□□□ 0.86
TM9SF1-201ENST00000261789 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.43■□□□□ 0.86
TM9SF1-201ENST00000261789 CHMP4BQ9H444 224 aaKnown RBP20.43■□□□□ 0.86
TM9SF1-201ENST00000261789 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
TM9SF1-201ENST00000261789 C16orf71Q8IYS4 520 aaPredicted RBP20.43■□□□□ 0.86
TM9SF1-201ENST00000261789 API5Q9BZZ5 524 aaKnown RBP20.43■□□□□ 0.86
TM9SF1-201ENST00000261789 HSP90AB1P08238 724 aaKnown RBP20.42■□□□□ 0.86
TM9SF1-201ENST00000261789 GSPT1P15170 499 aaKnown RBP20.41■□□□□ 0.86
TM9SF1-201ENST00000261789 DDIT3P35638 169 aa20.41■□□□□ 0.86
TM9SF1-201ENST00000261789 HSP90AB2PQ58FF8 381 aa20.41■□□□□ 0.86
TM9SF1-201ENST00000261789 SNX21Q969T3 373 aa20.41■□□□□ 0.86
TM9SF1-201ENST00000261789 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
TM9SF1-201ENST00000261789 MIS18AQ9NYP9 233 aa20.4■□□□□ 0.86
TM9SF1-201ENST00000261789 MON2Q7Z3U7 1717 aa20.4■□□□□ 0.86
TM9SF1-201ENST00000261789 APBB1O00213 710 aa20.39■□□□□ 0.86
TM9SF1-201ENST00000261789 XRCC6P12956 609 aaKnown RBP eCLIP20.39■□□□□ 0.86
TM9SF1-201ENST00000261789 KNDC1Q76NI1 1749 aa20.39■□□□□ 0.86
TM9SF1-201ENST00000261789 NCOA3Q9Y6Q9 1424 aa20.39■□□□□ 0.85
TM9SF1-201ENST00000261789 PANK2Q9BZ23 570 aa20.39■□□□□ 0.85
TM9SF1-201ENST00000261789 L1TD1Q5T7N2 865 aaKnown RBP20.38■□□□□ 0.85
TM9SF1-201ENST00000261789 PLEKHM2Q8IWE5 1019 aa20.38■□□□□ 0.85
TM9SF1-201ENST00000261789 ACEP12821 1306 aa20.38■□□□□ 0.85
TM9SF1-201ENST00000261789 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
TM9SF1-201ENST00000261789 GOLGA6L3A6NEY3 463 aa20.38■□□□□ 0.85
TM9SF1-201ENST00000261789 OTUD7AQ8TE49 926 aaPredicted RBP20.38■□□□□ 0.85
TM9SF1-201ENST00000261789 TNPO1Q92973 898 aaKnown RBP20.38■□□□□ 0.85
TM9SF1-201ENST00000261789 C3P01024 1663 aa20.38■□□□□ 0.85
TM9SF1-201ENST00000261789 HSP90AA1P07900 732 aaKnown RBP20.36■□□□□ 0.85
TM9SF1-201ENST00000261789 DCTPP1Q9H773 170 aa20.36■□□□□ 0.85
TM9SF1-201ENST00000261789 FSD2A1L4K1 749 aa20.35■□□□□ 0.85
TM9SF1-201ENST00000261789 CHL1O00533 1208 aa20.35■□□□□ 0.85
TM9SF1-201ENST00000261789 FOXO3O43524 673 aa20.35■□□□□ 0.85
TM9SF1-201ENST00000261789 SMARCA5O60264 1052 aaPredicted RBP20.35■□□□□ 0.85
TM9SF1-201ENST00000261789 AKAP12Q02952 1782 aa20.35■□□□□ 0.85
TM9SF1-201ENST00000261789 INTS3Q68E01 1043 aaKnown RBP20.35■□□□□ 0.85
TM9SF1-201ENST00000261789 ITSN1Q15811 1721 aa20.35■□□□□ 0.85
TM9SF1-201ENST00000261789 CDC45O75419 566 aa20.34■□□□□ 0.85
TM9SF1-201ENST00000261789 FAM43AQ8N2R8 423 aa20.34■□□□□ 0.85
TM9SF1-201ENST00000261789 RGS12O14924 1447 aa20.34■□□□□ 0.85
TM9SF1-201ENST00000261789 TECPR2O15040 1411 aa20.34■□□□□ 0.85
TM9SF1-201ENST00000261789 TRHP20396 242 aaPredicted RBP20.33■□□□□ 0.85
TM9SF1-201ENST00000261789 SIRT1Q96EB6 747 aa20.33■□□□□ 0.85
TM9SF1-201ENST00000261789 MEIS3Q99687 375 aa20.33■□□□□ 0.85
TM9SF1-201ENST00000261789 HDGFP51858 240 aaKnown RBP20.33■□□□□ 0.84
TM9SF1-201ENST00000261789 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms