RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 MRE11P49959 708 aa21.25■□□□□ 0.99
CDK4-201ENST00000257904 FAM135BQ49AJ0 1406 aa21.24■□□□□ 0.99
CDK4-201ENST00000257904 HDGFL2Q7Z4V5 671 aaPredicted RBP21.24■□□□□ 0.99
CDK4-201ENST00000257904 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.24■□□□□ 0.99
CDK4-201ENST00000257904 KIF20BQ96Q89 1820 aa21.24■□□□□ 0.99
CDK4-201ENST00000257904 FER1L4A9Z1Z3 1794 aa21.23■□□□□ 0.99
CDK4-201ENST00000257904 CIZ1Q9ULV3 898 aaPredicted RBP21.22■□□□□ 0.99
CDK4-201ENST00000257904 C3P01024 1663 aa21.22■□□□□ 0.99
CDK4-201ENST00000257904 ZBTB7BO15156 539 aaPredicted RBP21.22■□□□□ 0.99
CDK4-201ENST00000257904 GCC1Q96CN9 775 aa21.22■□□□□ 0.99
CDK4-201ENST00000257904 UBR1Q8IWV7 1749 aa21.21■□□□□ 0.99
CDK4-201ENST00000257904 PIK3R4Q99570 1358 aa21.21■□□□□ 0.99
CDK4-201ENST00000257904 PRKAR2BP31323 418 aa21.21■□□□□ 0.99
CDK4-201ENST00000257904 ISY1Q9ULR0 285 aaKnown RBP21.21■□□□□ 0.99
CDK4-201ENST00000257904 HDGFP51858 240 aaKnown RBP21.2■□□□□ 0.99
CDK4-201ENST00000257904 PTCH1Q13635 1447 aa21.2■□□□□ 0.99
CDK4-201ENST00000257904 CHMP4BQ9H444 224 aaKnown RBP21.2■□□□□ 0.99
CDK4-201ENST00000257904 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
CDK4-201ENST00000257904 TNPO1Q92973 898 aaKnown RBP21.2■□□□□ 0.98
CDK4-201ENST00000257904 KIF2CQ99661 725 aa21.2■□□□□ 0.98
CDK4-201ENST00000257904 ANKRD45Q5TZF3 282 aa21.19■□□□□ 0.98
CDK4-201ENST00000257904 ARHGAP45Q92619 1136 aa21.19■□□□□ 0.98
CDK4-201ENST00000257904 MRPL50Q8N5N7 158 aaKnown RBP21.19■□□□□ 0.98
CDK4-201ENST00000257904 GRPEL1Q9HAV7 217 aa21.19■□□□□ 0.98
CDK4-201ENST00000257904 TMEM2Q9UHN6 1383 aa21.18■□□□□ 0.98
CDK4-201ENST00000257904 SETD1AO15047 1707 aaKnown RBP21.18■□□□□ 0.98
CDK4-201ENST00000257904 VAMP4O75379 141 aa21.18■□□□□ 0.98
CDK4-201ENST00000257904 RAB3GAP1Q15042 981 aa21.18■□□□□ 0.98
CDK4-201ENST00000257904 CDK19Q9BWU1 502 aa21.18■□□□□ 0.98
CDK4-201ENST00000257904 CABP1Q9NZU7 370 aa21.18■□□□□ 0.98
CDK4-201ENST00000257904 CLCN1P35523 988 aa21.17■□□□□ 0.98
CDK4-201ENST00000257904 NFE2L2Q16236 605 aa21.17■□□□□ 0.98
CDK4-201ENST00000257904 GBP4Q96PP9 640 aa21.17■□□□□ 0.98
CDK4-201ENST00000257904 NRXN3Q9Y4C0 1643 aa21.16■□□□□ 0.98
CDK4-201ENST00000257904 C1orf115Q9H7X2 142 aa21.16■□□□□ 0.98
CDK4-201ENST00000257904 POLKQ9UBT6 870 aa21.16■□□□□ 0.98
CDK4-201ENST00000257904 CALD1Q05682 793 aaKnown RBP21.16■□□□□ 0.98
CDK4-201ENST00000257904 WAPLQ7Z5K2 1190 aa21.16■□□□□ 0.98
CDK4-201ENST00000257904 TBC1D9Q6ZT07 1266 aa21.15■□□□□ 0.98
CDK4-201ENST00000257904 PHACTR3Q96KR7 559 aa21.15■□□□□ 0.98
CDK4-201ENST00000257904 ABCC4O15439 1325 aa21.14■□□□□ 0.98
CDK4-201ENST00000257904 DLC1Q96QB1 1528 aa21.14■□□□□ 0.97
CDK4-201ENST00000257904 SIRT2Q8IXJ6 389 aa21.14■□□□□ 0.97
CDK4-201ENST00000257904 TSPYL6Q8N831 410 aa21.14■□□□□ 0.97
CDK4-201ENST00000257904 IFT57Q9NWB7 429 aa21.14■□□□□ 0.97
CDK4-201ENST00000257904 CD2BP2O95400 341 aaKnown RBP21.13■□□□□ 0.97
CDK4-201ENST00000257904 THUMPD2Q9BTF0 503 aaKnown RBP21.13■□□□□ 0.97
CDK4-201ENST00000257904 K7ELQ4 463 aaPredicted RBP21.13■□□□□ 0.97
CDK4-201ENST00000257904 GNAI1P63096 354 aa21.13■□□□□ 0.97
CDK4-201ENST00000257904 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
CDK4-201ENST00000257904 METP08581 1390 aa21.12■□□□□ 0.97
CDK4-201ENST00000257904 HMOX1P09601 288 aa21.12■□□□□ 0.97
CDK4-201ENST00000257904 PTMSP20962 102 aa21.12■□□□□ 0.97
CDK4-201ENST00000257904 FBLN1P23142 703 aa21.12■□□□□ 0.97
CDK4-201ENST00000257904 SKOR2Q2VWA4 1001 aaPredicted RBP21.12■□□□□ 0.97
CDK4-201ENST00000257904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.12■□□□□ 0.97
CDK4-201ENST00000257904 ATP7BP35670 1465 aa21.12■□□□□ 0.97
CDK4-201ENST00000257904 HSP90AA1P07900 732 aaKnown RBP21.11■□□□□ 0.97
CDK4-201ENST00000257904 ZNF853P0CG23 659 aa21.11■□□□□ 0.97
CDK4-201ENST00000257904 UBE2Q2Q8WVN8 375 aa21.1■□□□□ 0.97
CDK4-201ENST00000257904 MBIPQ9NS73 344 aa21.1■□□□□ 0.97
CDK4-201ENST00000257904 LTKP29376 864 aa21.09■□□□□ 0.97
CDK4-201ENST00000257904 CDC45O75419 566 aa21.08■□□□□ 0.97
CDK4-201ENST00000257904 ELL2O00472 640 aaPredicted RBP21.08■□□□□ 0.96
CDK4-201ENST00000257904 TXNDC2Q86VQ3 553 aa21.08■□□□□ 0.96
CDK4-201ENST00000257904 GAS2L3Q86XJ1 694 aa21.08■□□□□ 0.96
CDK4-201ENST00000257904 RBM42Q9BTD8 480 aaKnown RBP21.08■□□□□ 0.96
CDK4-201ENST00000257904 FOXD4L1Q9NU39 408 aa21.08■□□□□ 0.96
CDK4-201ENST00000257904 MAP2P11137 1827 aaKnown RBP21.07■□□□□ 0.96
CDK4-201ENST00000257904 IL13P35225 146 aa21.07■□□□□ 0.96
CDK4-201ENST00000257904 TWISTNBQ3B726 338 aaPredicted RBP21.07■□□□□ 0.96
CDK4-201ENST00000257904 PLEKHG1Q9ULL1 1385 aa21.06■□□□□ 0.96
CDK4-201ENST00000257904 CDK12Q9NYV4 1490 aaPredicted RBP21.06■□□□□ 0.96
CDK4-201ENST00000257904 SLIT1O75093 1534 aa21.06■□□□□ 0.96
CDK4-201ENST00000257904 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
CDK4-201ENST00000257904 EMILIN1Q9Y6C2 1016 aa21.06■□□□□ 0.96
CDK4-201ENST00000257904 ARHGAP23Q9P227 1491 aa21.05■□□□□ 0.96
CDK4-201ENST00000257904 RIMS1Q86UR5 1692 aaKnown RBP21.05■□□□□ 0.96
CDK4-201ENST00000257904 GAS2L2Q8NHY3 880 aa21.05■□□□□ 0.96
CDK4-201ENST00000257904 CFAP44Q96MT7 982 aa21.05■□□□□ 0.96
CDK4-201ENST00000257904 ADAMTS13Q76LX8 1427 aa21.05■□□□□ 0.96
CDK4-201ENST00000257904 GSPT1P15170 499 aaKnown RBP21.05■□□□□ 0.96
CDK4-201ENST00000257904 CLEC17AQ6ZS10 378 aa21.05■□□□□ 0.96
CDK4-201ENST00000257904 NAP1L5Q96NT1 182 aaPredicted RBP21.05■□□□□ 0.96
CDK4-201ENST00000257904 KIF24Q5T7B8 1368 aa21.04■□□□□ 0.96
CDK4-201ENST00000257904 ESPNB1AK53 854 aa21.04■□□□□ 0.96
CDK4-201ENST00000257904 LMOD3Q0VAK6 560 aa21.04■□□□□ 0.96
CDK4-201ENST00000257904 THEMISQ8N1K5 641 aaPredicted RBP21.04■□□□□ 0.96
CDK4-201ENST00000257904 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
CDK4-201ENST00000257904 EID1Q9Y6B2 187 aa21.04■□□□□ 0.96
CDK4-201ENST00000257904 KNDC1Q76NI1 1749 aa21.03■□□□□ 0.96
CDK4-201ENST00000257904 SSFA2P28290 1259 aa21.03■□□□□ 0.96
CDK4-201ENST00000257904 ADAMTSL3P82987 1691 aa21.02■□□□□ 0.96
CDK4-201ENST00000257904 EDC4Q6P2E9 1401 aaKnown RBP21.02■□□□□ 0.96
CDK4-201ENST00000257904 PLEKHM2Q8IWE5 1019 aa21.02■□□□□ 0.96
CDK4-201ENST00000257904 ERBB4Q15303 1308 aa21.02■□□□□ 0.96
CDK4-201ENST00000257904 TECPR2O15040 1411 aa21.02■□□□□ 0.96
CDK4-201ENST00000257904 SIRT1Q96EB6 747 aa21.01■□□□□ 0.95
CDK4-201ENST00000257904 CPSF1Q10570 1443 aaKnown RBP21.01■□□□□ 0.95
CDK4-201ENST00000257904 WASLO00401 505 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms