RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 GCC1Q96CN9 775 aa21.42■■□□□ 1.02
SLC52A1-201ENST00000254853 MBIPQ9NS73 344 aa21.42■■□□□ 1.02
SLC52A1-201ENST00000254853 IFT57Q9NWB7 429 aa21.42■■□□□ 1.02
SLC52A1-201ENST00000254853 TRAK2O60296 914 aa21.41■■□□□ 1.02
SLC52A1-201ENST00000254853 DLC1Q96QB1 1528 aa21.41■■□□□ 1.02
SLC52A1-201ENST00000254853 FSD2A1L4K1 749 aa21.41■■□□□ 1.02
SLC52A1-201ENST00000254853 GOLGA6L3A6NEY3 463 aa21.41■■□□□ 1.02
SLC52A1-201ENST00000254853 ZNF853P0CG23 659 aa21.41■■□□□ 1.02
SLC52A1-201ENST00000254853 NME9Q86XW9 330 aa21.41■■□□□ 1.02
SLC52A1-201ENST00000254853 MAP2P11137 1827 aaKnown RBP21.41■■□□□ 1.02
SLC52A1-201ENST00000254853 DDIT3P35638 169 aa21.4■■□□□ 1.02
SLC52A1-201ENST00000254853 ZRANB1Q9UGI0 708 aa21.4■■□□□ 1.02
SLC52A1-201ENST00000254853 XRCC6P12956 609 aaKnown RBP eCLIP21.4■■□□□ 1.02
SLC52A1-201ENST00000254853 SIRT2Q8IXJ6 389 aa21.4■■□□□ 1.02
SLC52A1-201ENST00000254853 CHMP4BQ9H444 224 aaKnown RBP21.4■■□□□ 1.02
SLC52A1-201ENST00000254853 ABCC4O15439 1325 aa21.39■■□□□ 1.01
SLC52A1-201ENST00000254853 TWISTNBQ3B726 338 aaPredicted RBP21.38■■□□□ 1.01
SLC52A1-201ENST00000254853 C8orf58Q8NAV2 365 aa21.37■■□□□ 1.01
SLC52A1-201ENST00000254853 KIF2CQ99661 725 aa21.37■■□□□ 1.01
SLC52A1-201ENST00000254853 CPSF1Q10570 1443 aaKnown RBP21.37■■□□□ 1.01
SLC52A1-201ENST00000254853 A2ML1A8K2U0 1454 aa21.37■■□□□ 1.01
SLC52A1-201ENST00000254853 EDC4Q6P2E9 1401 aaKnown RBP21.37■■□□□ 1.01
SLC52A1-201ENST00000254853 RIMS2Q9UQ26 1411 aa21.36■■□□□ 1.01
SLC52A1-201ENST00000254853 CDK12Q9NYV4 1490 aaPredicted RBP21.36■■□□□ 1.01
SLC52A1-201ENST00000254853 RIMBP3CA6NJZ7 1639 aa21.36■■□□□ 1.01
SLC52A1-201ENST00000254853 RIMBP3BA6NNM3 1639 aa21.36■■□□□ 1.01
SLC52A1-201ENST00000254853 TBC1D9Q6ZT07 1266 aa21.36■■□□□ 1.01
SLC52A1-201ENST00000254853 RIMBP3Q9UFD9 1639 aa21.36■■□□□ 1.01
SLC52A1-201ENST00000254853 DDX11L8A8MPP1 907 aa21.35■■□□□ 1.01
SLC52A1-201ENST00000254853 WASLO00401 505 aaPredicted RBP21.35■■□□□ 1.01
SLC52A1-201ENST00000254853 HSP90AB1P08238 724 aaKnown RBP21.35■■□□□ 1.01
SLC52A1-201ENST00000254853 CFAP44Q96MT7 982 aa21.34■■□□□ 1.01
SLC52A1-201ENST00000254853 RRAGDQ9NQL2 400 aaPredicted RBP21.34■■□□□ 1.01
SLC52A1-201ENST00000254853 SETD1AO15047 1707 aaKnown RBP21.34■■□□□ 1.01
SLC52A1-201ENST00000254853 FAM83GA6ND36 823 aa21.34■■□□□ 1.01
SLC52A1-201ENST00000254853 RRS1Q15050 365 aaKnown RBP21.33■■□□□ 1.01
SLC52A1-201ENST00000254853 PANK2Q9BZ23 570 aa21.33■■□□□ 1.01
SLC52A1-201ENST00000254853 AATKQ6ZMQ8 1374 aa21.33■■□□□ 1.01
SLC52A1-201ENST00000254853 CD2BP2O95400 341 aaKnown RBP21.32■■□□□ 1
SLC52A1-201ENST00000254853 LMOD3Q0VAK6 560 aa21.32■■□□□ 1
SLC52A1-201ENST00000254853 TNPO1Q92973 898 aaKnown RBP21.32■■□□□ 1
SLC52A1-201ENST00000254853 NCKAP5LQ9HCH0 1330 aa21.32■■□□□ 1
SLC52A1-201ENST00000254853 DCTN1Q14203 1278 aa21.32■■□□□ 1
SLC52A1-201ENST00000254853 API5Q9BZZ5 524 aaKnown RBP21.32■■□□□ 1
SLC52A1-201ENST00000254853 COG3Q96JB2 828 aa21.31■■□□□ 1
SLC52A1-201ENST00000254853 CIZ1Q9ULV3 898 aaPredicted RBP21.31■■□□□ 1
SLC52A1-201ENST00000254853 NUDT16Q96DE0 195 aaKnown RBP21.3■■□□□ 1
SLC52A1-201ENST00000254853 CPS1P31327 1500 aa21.3■■□□□ 1
SLC52A1-201ENST00000254853 TXNDC2Q86VQ3 553 aa21.3■■□□□ 1
SLC52A1-201ENST00000254853 RBM42Q9BTD8 480 aaKnown RBP21.3■■□□□ 1
SLC52A1-201ENST00000254853 DLG5Q8TDM6 1919 aa21.3■■□□□ 1
SLC52A1-201ENST00000254853 METP08581 1390 aa21.29■■□□□ 1
SLC52A1-201ENST00000254853 RAB3GAP1Q15042 981 aa21.29■■□□□ 1
SLC52A1-201ENST00000254853 FOXD4L1Q9NU39 408 aa21.29■■□□□ 1
SLC52A1-201ENST00000254853 CDC45O75419 566 aa21.28■■□□□ 1
SLC52A1-201ENST00000254853 SPATA31D1Q6ZQQ2 1576 aa21.27■■□□□ 1
SLC52A1-201ENST00000254853 GSPT1P15170 499 aaKnown RBP21.27■■□□□ 1
SLC52A1-201ENST00000254853 K7ELQ4 463 aaPredicted RBP21.26■□□□□ 0.99
SLC52A1-201ENST00000254853 MRE11P49959 708 aa21.26■□□□□ 0.99
SLC52A1-201ENST00000254853 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
SLC52A1-201ENST00000254853 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
SLC52A1-201ENST00000254853 HSP90AA1P07900 732 aaKnown RBP21.26■□□□□ 0.99
SLC52A1-201ENST00000254853 PLEKHM2Q8IWE5 1019 aa21.26■□□□□ 0.99
SLC52A1-201ENST00000254853 NRXN3Q9Y4C0 1643 aa21.25■□□□□ 0.99
SLC52A1-201ENST00000254853 GBP4Q96PP9 640 aa21.25■□□□□ 0.99
SLC52A1-201ENST00000254853 CCDC61Q9Y6R9 512 aa21.25■□□□□ 0.99
SLC52A1-201ENST00000254853 KIF24Q5T7B8 1368 aa21.25■□□□□ 0.99
SLC52A1-201ENST00000254853 MLECQ14165 292 aa21.24■□□□□ 0.99
SLC52A1-201ENST00000254853 DCTPP1Q9H773 170 aa21.24■□□□□ 0.99
SLC52A1-201ENST00000254853 REREQ9P2R6 1566 aa21.24■□□□□ 0.99
SLC52A1-201ENST00000254853 AEBP1Q8IUX7 1158 aa21.24■□□□□ 0.99
SLC52A1-201ENST00000254853 AGLP35573 1532 aa21.23■□□□□ 0.99
SLC52A1-201ENST00000254853 GRPEL1Q9HAV7 217 aa21.23■□□□□ 0.99
SLC52A1-201ENST00000254853 MON2Q7Z3U7 1717 aa21.23■□□□□ 0.99
SLC52A1-201ENST00000254853 FAM69CQ0P6D2 419 aa21.23■□□□□ 0.99
SLC52A1-201ENST00000254853 KRT24Q2M2I5 525 aa21.23■□□□□ 0.99
SLC52A1-201ENST00000254853 INTS3Q68E01 1043 aaKnown RBP21.23■□□□□ 0.99
SLC52A1-201ENST00000254853 EIF5BO60841 1220 aaKnown RBP21.22■□□□□ 0.99
SLC52A1-201ENST00000254853 GAS2L2Q8NHY3 880 aa21.22■□□□□ 0.99
SLC52A1-201ENST00000254853 C16orf71Q8IYS4 520 aaPredicted RBP21.22■□□□□ 0.99
SLC52A1-201ENST00000254853 EIF4A2Q14240 407 aaKnown RBP21.21■□□□□ 0.99
SLC52A1-201ENST00000254853 TTC22Q5TAA0 569 aa21.21■□□□□ 0.99
SLC52A1-201ENST00000254853 SULT6B1Q6IMI4 303 aa21.21■□□□□ 0.99
SLC52A1-201ENST00000254853 PRR36Q9H6K5 1346 aa21.2■□□□□ 0.98
SLC52A1-201ENST00000254853 C3P01024 1663 aa21.2■□□□□ 0.98
SLC52A1-201ENST00000254853 CYB5RLQ6IPT4 315 aa21.2■□□□□ 0.98
SLC52A1-201ENST00000254853 RGS12O14924 1447 aa21.2■□□□□ 0.98
SLC52A1-201ENST00000254853 ANKRD44Q8N8A2 993 aa21.19■□□□□ 0.98
SLC52A1-201ENST00000254853 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.19■□□□□ 0.98
SLC52A1-201ENST00000254853 SSFA2P28290 1259 aa21.19■□□□□ 0.98
SLC52A1-201ENST00000254853 ISY1Q9ULR0 285 aaKnown RBP21.19■□□□□ 0.98
SLC52A1-201ENST00000254853 ATP10DQ9P241 1426 aa21.19■□□□□ 0.98
SLC52A1-201ENST00000254853 OTUD7AQ8TE49 926 aaPredicted RBP21.18■□□□□ 0.98
SLC52A1-201ENST00000254853 MCM10Q7L590 875 aa21.18■□□□□ 0.98
SLC52A1-201ENST00000254853 AKAP12Q02952 1782 aa21.17■□□□□ 0.98
SLC52A1-201ENST00000254853 CHL1O00533 1208 aa21.17■□□□□ 0.98
SLC52A1-201ENST00000254853 SKOR2Q2VWA4 1001 aaPredicted RBP21.17■□□□□ 0.98
SLC52A1-201ENST00000254853 GAS2L3Q86XJ1 694 aa21.17■□□□□ 0.98
SLC52A1-201ENST00000254853 NRKQ7Z2Y5 1582 aa21.17■□□□□ 0.98
SLC52A1-201ENST00000254853 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms