RNA–Protein interactions for RNA: ENST00000238892.3

CRIPT-201, Transcript of CXXC repeat containing interactor of PDZ3 domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIPT, Length 1,953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIPT-201ENST00000238892 CCER2I3L3R5 266 aa12.23□□□□□ -0.45
CRIPT-201ENST00000238892 NOP58Q9Y2X3 529 aaKnown RBP12.23□□□□□ -0.45
CRIPT-201ENST00000238892 COL24A1Q17RW2 1714 aa12.22□□□□□ -0.45
CRIPT-201ENST00000238892 PEAK1Q9H792 1746 aa12.22□□□□□ -0.45
CRIPT-201ENST00000238892 TRPM3Q9HCF6 1732 aaPredicted RBP12.22□□□□□ -0.45
CRIPT-201ENST00000238892 CRYBG1Q9Y4K1 1723 aa12.22□□□□□ -0.45
CRIPT-201ENST00000238892 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
CRIPT-201ENST00000238892 ATP7BP35670 1465 aa12.22□□□□□ -0.45
CRIPT-201ENST00000238892 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
CRIPT-201ENST00000238892 CABLES1Q8TDN4 633 aa12.22□□□□□ -0.45
CRIPT-201ENST00000238892 WASLO00401 505 aaPredicted RBP12.21□□□□□ -0.46
CRIPT-201ENST00000238892 WWC3Q9ULE0 1092 aa12.21□□□□□ -0.46
CRIPT-201ENST00000238892 ITSN1Q15811 1721 aa12.21□□□□□ -0.46
CRIPT-201ENST00000238892 SBF2Q86WG5 1849 aa12.2□□□□□ -0.46
CRIPT-201ENST00000238892 TOPAZ1Q8N9V7 1692 aa12.2□□□□□ -0.46
CRIPT-201ENST00000238892 SLC15A2Q16348 729 aa12.19□□□□□ -0.46
CRIPT-201ENST00000238892 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
CRIPT-201ENST00000238892 THRAP3Q9Y2W1 955 aaKnown RBP12.19□□□□□ -0.46
CRIPT-201ENST00000238892 RGPD8O14715 1765 aaPredicted RBP12.19□□□□□ -0.46
CRIPT-201ENST00000238892 NBR1Q14596 966 aa12.19□□□□□ -0.46
CRIPT-201ENST00000238892 KLRG1Q96E93 195 aa12.19□□□□□ -0.46
CRIPT-201ENST00000238892 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
CRIPT-201ENST00000238892 BCL9O00512 1426 aa12.19□□□□□ -0.46
CRIPT-201ENST00000238892 QSER1Q2KHR3 1735 aa12.19□□□□□ -0.46
CRIPT-201ENST00000238892 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
CRIPT-201ENST00000238892 POLD1P28340 1107 aa12.18□□□□□ -0.46
CRIPT-201ENST00000238892 NGDNQ8NEJ9 315 aaKnown RBP12.18□□□□□ -0.46
CRIPT-201ENST00000238892 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
CRIPT-201ENST00000238892 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
CRIPT-201ENST00000238892 SAFB2Q14151 953 aaKnown RBP eCLIP12.17□□□□□ -0.46
CRIPT-201ENST00000238892 PMFBP1Q8TBY8 1022 aa12.17□□□□□ -0.46
CRIPT-201ENST00000238892 PRDM11Q9NQV5 511 aa12.17□□□□□ -0.46
CRIPT-201ENST00000238892 KIAA1210Q9ULL0 1709 aa12.17□□□□□ -0.46
CRIPT-201ENST00000238892 SLC16A10Q8TF71 515 aa12.16□□□□□ -0.46
CRIPT-201ENST00000238892 SSH2Q76I76 1423 aa12.16□□□□□ -0.46
CRIPT-201ENST00000238892 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
CRIPT-201ENST00000238892 PRR36Q9H6K5 1346 aa12.16□□□□□ -0.46
CRIPT-201ENST00000238892 MAPK8IP2Q13387 824 aaPredicted RBP12.16□□□□□ -0.46
CRIPT-201ENST00000238892 DCAF11Q8TEB1 546 aa12.16□□□□□ -0.46
CRIPT-201ENST00000238892 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
CRIPT-201ENST00000238892 ARHGEF28Q8N1W1 1705 aaKnown RBP12.15□□□□□ -0.46
CRIPT-201ENST00000238892 POLR3AO14802 1390 aaPredicted RBP12.15□□□□□ -0.47
CRIPT-201ENST00000238892 TCP11L2Q8N4U5 519 aa12.14□□□□□ -0.47
CRIPT-201ENST00000238892 PAPPAQ13219 1627 aa12.14□□□□□ -0.47
CRIPT-201ENST00000238892 PDGFDQ9GZP0 370 aaPredicted RBP12.14□□□□□ -0.47
CRIPT-201ENST00000238892 NUDT16Q96DE0 195 aaKnown RBP12.13□□□□□ -0.47
CRIPT-201ENST00000238892 PHRF1Q9P1Y6 1649 aaKnown RBP12.13□□□□□ -0.47
CRIPT-201ENST00000238892 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
CRIPT-201ENST00000238892 KIF3CO14782 793 aa12.12□□□□□ -0.47
CRIPT-201ENST00000238892 PPP4R2Q9NY27 417 aa12.12□□□□□ -0.47
CRIPT-201ENST00000238892 TOMM70O94826 608 aa12.12□□□□□ -0.47
CRIPT-201ENST00000238892 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
CRIPT-201ENST00000238892 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
CRIPT-201ENST00000238892 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
CRIPT-201ENST00000238892 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
CRIPT-201ENST00000238892 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
CRIPT-201ENST00000238892 LRRC37A3O60309 1634 aa12.11□□□□□ -0.47
CRIPT-201ENST00000238892 CPDO75976 1380 aa12.11□□□□□ -0.47
CRIPT-201ENST00000238892 IRX6P78412 446 aaPredicted RBP12.1□□□□□ -0.47
CRIPT-201ENST00000238892 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
CRIPT-201ENST00000238892 TNS2Q63HR2 1409 aa12.1□□□□□ -0.47
CRIPT-201ENST00000238892 CDK19Q9BWU1 502 aa12.09□□□□□ -0.47
CRIPT-201ENST00000238892 AKAP12Q02952 1782 aa12.09□□□□□ -0.47
CRIPT-201ENST00000238892 USP19O94966 1318 aa12.09□□□□□ -0.47
CRIPT-201ENST00000238892 KIAA0232Q92628 1395 aa12.09□□□□□ -0.47
CRIPT-201ENST00000238892 RBM46Q8TBY0 533 aaKnown RBP12.09□□□□□ -0.47
CRIPT-201ENST00000238892 STRN4Q9NRL3 753 aa12.09□□□□□ -0.47
CRIPT-201ENST00000238892 EVA1CP58658 441 aa12.08□□□□□ -0.48
CRIPT-201ENST00000238892 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
CRIPT-201ENST00000238892 LMO7Q8WWI1 1683 aa12.07□□□□□ -0.48
CRIPT-201ENST00000238892 WNK3Q9BYP7 1800 aa12.07□□□□□ -0.48
CRIPT-201ENST00000238892 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
CRIPT-201ENST00000238892 YBX3P16989 372 aaKnown RBP eCLIP12.07□□□□□ -0.48
CRIPT-201ENST00000238892 FSTL1Q12841 308 aa12.07□□□□□ -0.48
CRIPT-201ENST00000238892 NLRP13Q86W25 1043 aa12.07□□□□□ -0.48
CRIPT-201ENST00000238892 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
CRIPT-201ENST00000238892 ANP32CO43423 234 aa12.07□□□□□ -0.48
CRIPT-201ENST00000238892 PROM2Q8N271 834 aa12.07□□□□□ -0.48
CRIPT-201ENST00000238892 ACEP12821 1306 aa12.06□□□□□ -0.48
CRIPT-201ENST00000238892 CICQ96RK0 1608 aaPredicted RBP12.06□□□□□ -0.48
CRIPT-201ENST00000238892 CENPJQ9HC77 1338 aaPredicted RBP12.05□□□□□ -0.48
CRIPT-201ENST00000238892 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
CRIPT-201ENST00000238892 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
CRIPT-201ENST00000238892 NHSQ6T4R5 1651 aa12.04□□□□□ -0.48
CRIPT-201ENST00000238892 ABTB2Q8N961 1025 aa12.04□□□□□ -0.48
CRIPT-201ENST00000238892 IPO9Q96P70 1041 aaKnown RBP12.04□□□□□ -0.48
CRIPT-201ENST00000238892 PKNOX2Q96KN3 472 aa12.03□□□□□ -0.48
CRIPT-201ENST00000238892 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
CRIPT-201ENST00000238892 C10orf71Q711Q0 1435 aa12.03□□□□□ -0.48
CRIPT-201ENST00000238892 HSPA1AP0DMV8 641 aaKnown RBP12.03□□□□□ -0.48
CRIPT-201ENST00000238892 HSPA1BP0DMV9 641 aaKnown RBP12.03□□□□□ -0.48
CRIPT-201ENST00000238892 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
CRIPT-201ENST00000238892 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.49
CRIPT-201ENST00000238892 CRB1P82279 1406 aa12.02□□□□□ -0.49
CRIPT-201ENST00000238892 SLIT3O75094 1523 aa12.02□□□□□ -0.49
CRIPT-201ENST00000238892 CEP350Q5VT06 3117 aa12.02□□□□□ -0.49
CRIPT-201ENST00000238892 TRPM1Q7Z4N2 1603 aa12.01□□□□□ -0.49
CRIPT-201ENST00000238892 ZC3H6P61129 1189 aaKnown RBP12.01□□□□□ -0.49
CRIPT-201ENST00000238892 CHRNA2Q15822 529 aa12.01□□□□□ -0.49
CRIPT-201ENST00000238892 DDB1Q16531 1140 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms