RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Rreb1Q3UH06 1700 aaKnown RBP30.43■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Med1Q925J9 1575 aa30.43■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Safb2Q80YR5 991 aaKnown RBP30.43■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Chmp4bQ9D8B3 224 aaKnown RBP30.43■■■□□ 2.46
Ubp1-203ENSMUST00000116492 AU019823E9PUQ3 292 aa30.42■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Map7O88735 730 aa30.42■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Tmco5bQ80X59 307 aa30.41■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Cavin2Q63918 418 aaKnown RBP30.41■■■□□ 2.46
Ubp1-203ENSMUST00000116492 CemipQ8BI06 1361 aa30.41■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Mcm10Q0VBD2 885 aa30.4■■■□□ 2.46
Ubp1-203ENSMUST00000116492 MvpQ9EQK5 861 aa30.4■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Eif4a2P10630 407 aa30.39■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Tbc1d32Q3URV1 1296 aa30.39■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Rangap1P46061 589 aaKnown RBP30.38■■■□□ 2.45
Ubp1-203ENSMUST00000116492 SkilQ60665 675 aa30.38■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Stk31Q99MW1 1018 aa30.38■■■□□ 2.45
Ubp1-203ENSMUST00000116492 NalcnQ8BXR5 1738 aa30.37■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Nectin2P32507 530 aa30.37■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Usp16Q99LG0 825 aa30.37■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Rims2Q9EQZ7 1530 aa30.36■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Nutm1Q8BHP2 1126 aa30.35■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Ecm2Q5FW85 670 aa30.35■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Pnmal2G3X9N3 661 aa30.34■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Ankrd44B2RXR6 993 aa30.34■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Wwc1Q5SXA9 1104 aa30.34■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Zfp777B9EKF4 885 aa30.33■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Cdk12Q14AX6 1484 aaKnown RBP30.33■■■□□ 2.45
Ubp1-203ENSMUST00000116492 Rabep1O35551 862 aa30.32■■■□□ 2.44
Ubp1-203ENSMUST00000116492 D430041D05RikF6ZGR6 1678 aa30.3■■■□□ 2.44
Ubp1-203ENSMUST00000116492 Kif18aQ91WD7 886 aa30.3■■■□□ 2.44
Ubp1-203ENSMUST00000116492 Sptbn5F6UCX4 1208 aa30.29■■■□□ 2.44
Ubp1-203ENSMUST00000116492 MarsQ68FL6 902 aaKnown RBP30.29■■■□□ 2.44
Ubp1-203ENSMUST00000116492 MpripP97434 1024 aa30.28■■■□□ 2.44
Ubp1-203ENSMUST00000116492 Abcc10Q8R4P9 1501 aa30.28■■■□□ 2.44
Ubp1-203ENSMUST00000116492 Mon2Q80TL7 1715 aa30.28■■■□□ 2.44
Ubp1-203ENSMUST00000116492 Brd1E9PZ26 1189 aaKnown RBP30.28■■■□□ 2.44
Ubp1-203ENSMUST00000116492 Lmtk3Q5XJV6 1424 aa30.27■■■□□ 2.44
Ubp1-203ENSMUST00000116492 U2surpQ6NV83 1029 aaKnown RBP30.27■■■□□ 2.44
Ubp1-203ENSMUST00000116492 Kif20bQ80WE4 1774 aaKnown RBP30.26■■■□□ 2.43
Ubp1-203ENSMUST00000116492 KnstrnQ9D9Z1 312 aaKnown RBP30.26■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Pik3c2aQ61194 1686 aa30.26■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Col16a1Q8BLX7 1580 aa30.25■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Ubr1O70481 1757 aa30.25■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Plin1Q8CGN5 517 aa30.23■■■□□ 2.43
Ubp1-203ENSMUST00000116492 NgefQ8CHT1 710 aa30.23■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Cetn4Q8K4K1 168 aa30.23■■■□□ 2.43
Ubp1-203ENSMUST00000116492 C5P06684 1680 aa30.23■■■□□ 2.43
Ubp1-203ENSMUST00000116492 DaxxO35613 739 aa30.22■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Als2Q920R0 1651 aa30.22■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Slit2Q9R1B9 1521 aa30.21■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Klhdc4Q921I2 584 aa30.21■■■□□ 2.43
Ubp1-203ENSMUST00000116492 LifrP42703 1092 aa30.2■■■□□ 2.43
Ubp1-203ENSMUST00000116492 Tnpo1Q8BFY9 898 aaKnown RBP30.2■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Mfap1aC0HKD8 439 aaKnown RBP30.19■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Mfap1bC0HKD9 439 aaKnown RBP30.19■■■□□ 2.42
Ubp1-203ENSMUST00000116492 TmpoQ61033 693 aaKnown RBP30.19■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Ric3Q8BPM6 367 aa30.19■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Map2P20357 1828 aa30.19■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Senp3Q9EP97 568 aaKnown RBP30.18■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Scn7aB1AYL1 1681 aa30.18■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Plppr3Q7TPB0 716 aa30.17■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Aldh1l2Q8K009 923 aa30.17■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Idi1P58044 227 aa30.17■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Dennd6aQ8BH65 605 aa30.17■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Cog6Q8R3I3 657 aa30.17■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Adgrb1Q3UHD1 1582 aa30.15■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Chl1P70232 1209 aa30.15■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Rad17Q6NXW6 688 aa30.15■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Htatsf1Q8BGC0 757 aa30.15■■■□□ 2.42
Ubp1-203ENSMUST00000116492 4930407I10RikD3Z5T8 1512 aa30.14■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Kif24Q6NWW5 1356 aa30.14■■■□□ 2.42
Ubp1-203ENSMUST00000116492 HnrnpuQ8VEK3 800 aaKnown RBP30.14■■■□□ 2.42
Ubp1-203ENSMUST00000116492 Camta1A2A891 1682 aa30.13■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Nlgn1Q99K10 843 aa30.13■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Tet3Q8BG87 1668 aa30.13■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Parp14Q2EMV9 1817 aa30.12■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Ptpn23Q6PB44 1692 aa30.12■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Trim27Q62158 513 aa30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Rab11fip3Q8CHD8 1047 aa30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Ap3b2Q9JME5 1082 aa30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Bcl9Q9D219 1425 aa30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Sox12Q04890 314 aa30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Scaf1Q5U4C3 1256 aaKnown RBP30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Pdlim2Q8R1G6 349 aa30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 CarsQ9ER72 831 aaKnown RBP30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 FancaQ9JL70 1439 aa30.11■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Gm10563F6WIE4 79 aa30.1■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Cgnl1Q6AW69 1298 aa30.1■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Wdr63B2RY71 923 aa30.09■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Frmpd2A0A140LI67 1392 aa30.09■■■□□ 2.41
Ubp1-203ENSMUST00000116492 ArxO35085 564 aa30.08■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Cabp4Q8VHC5 271 aa30.08■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Rtf1A2AQ19 715 aaKnown RBP30.08■■■□□ 2.41
Ubp1-203ENSMUST00000116492 Kif2cQ922S8 721 aa30.07■■■□□ 2.4
Ubp1-203ENSMUST00000116492 Trpm3Q5F4S9 1721 aa30.07■■■□□ 2.4
Ubp1-203ENSMUST00000116492 Aldh8a1Q8BH00 487 aa30.07■■■□□ 2.4
Ubp1-203ENSMUST00000116492 GphnQ8BUV3 769 aaKnown RBP30.07■■■□□ 2.4
Ubp1-203ENSMUST00000116492 Gm21190A0A0G2JGJ6 266 aa30.06■■■□□ 2.4
Ubp1-203ENSMUST00000116492 Eya1P97767 591 aa30.05■■■□□ 2.4
Ubp1-203ENSMUST00000116492 Tm6sf1P58749 370 aa30.04■■■□□ 2.4
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms